C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00038Q_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000163694-ENSG00000179299 CGP 9606 4:40423267-40809985
GeneTranscriptPositionBiotype
ENSG00000163694 (RBM47)
RNA binding motif protein 47 		ENST00000295971 (RBM47-006) 40424338-40629864 protein_coding
ENST00000381793 (RBM47-001) 40423267-40514758 protein_coding
ENST00000381795 (RBM47-002) 40423267-40515973 protein_coding
ENST00000505220 (RBM47-010) 40438716-40630786 protein_coding
ENST00000505414 (RBM47-009) 40438418-40630845 protein_coding
ENST00000507180 (RBM47-014) 40438523-40475749 protein_coding
ENST00000510871 (RBM47-007) 40423681-40629864 nonsense_mediated_decay
ENST00000511598 (RBM47-008) 40438553-40630875 protein_coding
ENST00000511902 (RBM47-012) 40438715-40630786 protein_coding
ENST00000513044 (RBM47-004) 40542523-40629529 retained_intron
ENST00000513473 (RBM47-015) 40438315-40514543 protein_coding
ENST00000514014 (RBM47-005) 40425412-40630623 protein_coding
ENST00000514782 (RBM47-013) 40438482-40630123 protein_coding
ENST00000515053 (RBM47-011) 40438242-40630316 protein_coding
ENST00000515809 (RBM47-016) 40432703-40466645 processed_transcript
ENSG00000179299 (NSUN7)
NOP2/Sun domain family, member 7 		ENST00000316607 (NSUN7-002) 40749925-40809985 protein_coding
ENST00000381782 (NSUN7-001) 40749897-40809985 protein_coding
ENST00000423784 (NSUN7-006) 40776075-40808503 processed_transcript
ENST00000463952 (NSUN7-004) 40762606-40776188 processed_transcript
ENST00000469033 (NSUN7-005) 40774265-40776476 retained_intron
ENST00000473399 (NSUN7-003) 40749964-40775456 retained_intron
ENST00000478857 (NSUN7-007) 40798874-40808543 processed_transcript
ENSG00000242197 (RP11-588L15.1)
 ENST00000481627 (RP11-588L15.1-001) 40491733-40492024 processed_pseudogene
ENSG00000248780 (RP11-632F7.1)
 ENST00000507378 (RP11-632F7.1-001) 40786110-40786710 processed_pseudogene
ENSG00000263642 (MIR4802)
microRNA 4802 		ENST00000581881 (MIR4802-201) 40502040-40502119 miRNA
ENSG00000275251 (AC098869.1)
 ENST00000408195 (AC098869.1-201) 40463711-40463803 miRNA
CIL_00038Q_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000070780-ENSMUSG00000029206 CGP 10090 5:66016549-66298016
GeneTranscriptPositionBiotype
ENSMUSG00000029206 (Nsun7)
NOL1/NOP2/Sun domain family, member 7 		ENSMUST00000031109 (Nsun7-201) 66260125-66298016 protein_coding
ENSMUST00000065530 (Nsun7-001) 66259912-66297062 protein_coding
ENSMUST00000113720 (Nsun7-003) 66260312-66298016 protein_coding
ENSMUST00000127901 (Nsun7-004) 66260018-66266071 retained_intron
ENSMUST00000131585 (Nsun7-002) 66261159-66298016 protein_coding
ENSMUSG00000070780 (Rbm47)
RNA binding motif protein 47 		ENSMUST00000094756 (Rbm47-005) 66018751-66098179 protein_coding
ENSMUST00000094757 (Rbm47-004) 66018646-66150978 protein_coding
ENSMUST00000113724 (Rbm47-002) 66018616-66081000 protein_coding
ENSMUST00000113725 (Rbm47-006) 66018602-66150898 protein_coding
ENSMUST00000113726 (Rbm47-001) 66016549-66173117 protein_coding
ENSMUST00000122855 (Rbm47-008) 66046094-66151787 processed_transcript
ENSMUST00000127275 (Rbm47-003) 66027220-66080984 protein_coding
ENSMUST00000131838 (Rbm47-010) 66027240-66151323 protein_coding
ENSMUST00000132606 (Rbm47-007) 66025542-66150955 retained_intron
ENSMUST00000136402 (Rbm47-009) 66046209-66151781 processed_transcript
ENSMUST00000145625 (Rbm47-011) 66026785-66054550 protein_coding
ENSMUST00000167950 (Rbm47-201) 66016557-66151924 protein_coding
ENSMUSG00000084108 (Gm15794)
predicted gene 15794 		ENSMUST00000120182 (Gm15794-001) 66197906-66198423 processed_pseudogene
ENSMUSG00000097092 (Gm26725)
predicted gene, 26725 		ENSMUST00000180652 (Gm26725-201) 66151213-66174944 lincRNA
ENSMUSG00000102086 (RP24-351O18.1)
RIKEN cDNA 1700126H18 gene 		ENSMUST00000187515 (RP24-351O18.1-001) 66166607-66191335 sense_overlapping

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00038Q_0001ENSG00000163694ENST00000295971ENST00000381793ENST00000381795ENST00000505220ENST00000505414ENST00000507180ENST00000510871ENST00000511598ENST00000511902ENST00000513044ENST00000513473ENST00000514014ENST00000514782ENST00000515053ENST00000515809ENSG00000179299ENST00000316607ENST00000381782ENST00000423784ENST00000463952ENST00000469033ENST00000473399ENST00000478857ENSG00000242197ENST00000481627ENSG00000248780ENST00000507378ENSG00000263642ENST00000581881ENSG00000275251ENST00000408195CIL_00038Q_0002ENSMUSG00000029206ENSMUST00000031109ENSMUST00000065530ENSMUST00000113720ENSMUST00000127901ENSMUST00000131585ENSMUSG00000070780ENSMUST00000094756ENSMUST00000094757ENSMUST00000113724ENSMUST00000113725ENSMUST00000113726ENSMUST00000122855ENSMUST00000127275ENSMUST00000131838ENSMUST00000132606ENSMUST00000136402ENSMUST00000145625ENSMUST00000167950ENSMUSG00000084108ENSMUST00000120182ENSMUSG00000097092ENSMUST00000180652ENSMUSG00000102086ENSMUST00000187515
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00038Q_0001ENSG00000163694ENST00000295971ENST00000381793ENST00000381795ENST00000510871ENST00000513044ENST00000514014ENSG00000179299ENST00000316607ENST00000381782ENST00000423784ENST00000473399ENST00000478857ENSG00000242197ENST00000481627ENSG00000248780ENST00000507378ENSG00000263642ENST00000581881ENSG00000275251ENST00000408195CIL_00038Q_0002ENSMUSG00000029206ENSMUST00000031109ENSMUST00000065530ENSMUST00000113720ENSMUST00000127901ENSMUST00000131585ENSMUSG00000070780ENSMUST00000094756ENSMUST00000094757ENSMUST00000113724ENSMUST00000113725ENSMUST00000113726ENSMUST00000145625ENSMUST00000167950ENSMUSG00000084108ENSMUST00000120182ENSMUSG00000097092ENSMUST00000180652ENSMUSG00000102086ENSMUST00000187515
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000163694 ENST00000295971 N/A N/A 5.048±0.00 N/A 3.405±0.00 8.439±0.00 N/A 4.688±0.00 0.775±0.00 5.333±0.00 N/A 5.239±0.41 14.621±0.00 1.992±0.00
ENST00000381793 N/A N/A N/A N/A N/A N/A N/A 7.437±0.00 0.344±0.00 N/A N/A 0.913±0.00 N/A N/A
ENST00000381795 0.942±0.00 3.582±0.00 N/A 0.112±0.00 3.438±0.00 N/A 0.102±0.00 36.142±0.00 N/A 1.364±0.00 N/A 1.475±0.37 1.197±0.00 0.307±0.00
ENST00000505220 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505414 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507180 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510871 N/A N/A N/A 0.232±0.00 1.030±0.00 N/A 0.196±0.00 1.790±0.00 N/A N/A 0.122±0.00 3.034±1.52 2.131±0.39 0.890±0.00
ENST00000511598 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511902 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513044 N/A N/A N/A N/A N/A N/A 0.261±0.00 N/A 0.791±0.00 N/A N/A N/A N/A N/A
ENST00000513473 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514014 N/A N/A 13.805±0.00 0.206±0.00 N/A 12.733±0.00 N/A 2.981±0.00 1.522±0.00 N/A N/A N/A N/A N/A
ENST00000514782 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515053 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515809 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000179299 ENST00000316607 N/A N/A N/A 0.038±0.00 0.220±0.00 0.308±0.00 0.094±0.00 N/A N/A 0.655±0.12 N/A 0.867±0.00 0.154±0.00 N/A
ENST00000381782 0.284±0.00 N/A N/A 0.052±0.00 0.212±0.00 N/A N/A 1.711±0.00 N/A 0.934±0.04 N/A 0.732±0.34 N/A 8.748±0.00
ENST00000423784 N/A N/A N/A 0.164±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000463952 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000469033 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000473399 N/A N/A 1.001±0.00 N/A 0.277±0.00 N/A N/A N/A N/A 0.910±0.00 N/A N/A N/A N/A
ENST00000478857 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.233±0.00 N/A N/A N/A
ENSG00000242197 ENST00000481627 N/A 0.057±0.00 2.859±0.00 N/A 0.058±0.00 N/A 0.544±0.00 N/A N/A N/A 0.050±0.00 N/A N/A N/A
ENSG00000248780 ENST00000507378 N/A N/A N/A N/A 0.154±0.14 0.075±0.06 N/A 0.284±0.00 N/A 0.192±0.14 N/A 0.390±0.29 0.166±0.10 0.162±0.06
ENSG00000263642 ENST00000581881 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.336±0.00 N/A
ENSG00000275251 ENST00000408195 N/A N/A N/A N/A N/A N/A N/A 0.595±0.00 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029206 ENSMUST00000031109 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 16.411±0.48
ENSMUST00000065530 0.215±0.19 0.126±0.06 0.143±0.04 1.026±0.04 0.147±0.06 0.055±0.03 0.032±0.01 0.132±0.03 0.030±0.01 0.453±0.00 0.018±0.00 0.112±0.05 0.055±0.05 5.858±2.87
ENSMUST00000113720 0.020±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.359±1.42
ENSMUST00000127901 0.185±0.19 0.113±0.00 0.036±0.00 0.412±0.17 0.069±0.01 0.055±0.01 0.046±0.01 0.069±0.05 0.042±0.02 0.567±0.09 0.018±0.00 0.165±0.10 0.040±0.03 N/A
ENSMUST00000131585 N/A N/A 0.063±0.00 0.329±0.05 0.093±0.00 N/A 0.018±0.00 0.052±0.00 0.060±0.04 N/A 0.021±0.01 N/A 0.033±0.01 3.670±0.00
ENSMUSG00000070780 ENSMUST00000094756 7.395±3.54 7.718±0.11 N/A 0.117±0.00 6.770±1.56 26.367±2.84 0.457±0.16 13.474±1.30 N/A 4.611±1.09 0.049±0.00 8.819±4.38 5.833±2.46 2.087±1.02
ENSMUST00000094757 2.960±0.55 26.273±4.15 N/A N/A 3.631±0.87 N/A N/A N/A N/A 4.416±1.51 N/A 4.945±1.67 N/A N/A
ENSMUST00000113724 N/A N/A 2.500±0.00 N/A N/A 45.068±6.63 N/A 26.578±7.30 5.934±5.02 3.387±0.00 N/A 9.213±3.38 8.108±0.84 N/A
ENSMUST00000113725 N/A N/A N/A N/A N/A N/A 0.126±0.00 N/A N/A N/A 0.030±0.00 N/A 4.304±0.00 N/A
ENSMUST00000113726 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.117±0.72
ENSMUST00000122855 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000127275 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131838 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132606 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136402 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145625 N/A N/A N/A 0.412±0.00 N/A N/A N/A N/A N/A 8.763±0.00 0.086±0.00 N/A N/A N/A
ENSMUST00000167950 3.149±1.50 10.623±1.68 5.140±0.55 0.359±0.16 4.170±1.54 16.930±2.70 0.199±0.00 19.405±9.75 4.627±4.36 3.750±0.64 0.045±0.02 4.017±0.97 10.214±5.79 N/A
ENSMUSG00000084108 ENSMUST00000120182 N/A N/A N/A N/A N/A N/A N/A 0.080±0.00 N/A N/A N/A N/A 0.055±0.06 0.080±0.00
ENSMUSG00000097092 ENSMUST00000180652 N/A N/A N/A 0.755±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000102086 ENSMUST00000187515 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.140±0.00 0.019±0.00 0.270±0.00

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