C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000393_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000197653-ENSG00000119242 CGP 9606 12:123762188-123972831
GeneTranscriptPositionBiotype
ENSG00000119242 (CCDC92)
coiled-coil domain containing 92 		ENST00000238156 (CCDC92-001) 123935622-123972824 protein_coding
ENST00000535556 (CCDC92-007) 123937714-123972616 protein_coding
ENST00000539551 (CCDC92-006) 123937765-123972090 protein_coding
ENST00000539761 (CCDC92-004) 123937688-123972051 protein_coding
ENST00000542348 (CCDC92-009) 123918660-123943495 processed_transcript
ENST00000544798 (CCDC92-008) 123922922-123944369 processed_transcript
ENST00000545037 (CCDC92-005) 123944270-123972831 protein_coding
ENST00000545135 (CCDC92-002) 123936417-123946773 protein_coding
ENST00000545891 (CCDC92-003) 123936436-123972734 protein_coding
ENSG00000179195 (ZNF664)
zinc finger protein 664 		ENST00000337815 (ZNF664-009) 123973295-124015422 protein_coding
ENST00000392404 (ZNF664-003) 123973212-124015426 protein_coding
ENST00000537532 (ZNF664-004) 123971845-124011808 processed_transcript
ENST00000538932 (ZNF664-002) 123973215-124015439 protein_coding
ENST00000539257 (ZNF664-012) 123973275-123988152 processed_transcript
ENST00000539501 (ZNF664-013) 123997706-124011824 processed_transcript
ENST00000539644 (ZNF664-001) 123973123-124015422 protein_coding
ENST00000540009 (ZNF664-007) 123973219-123974553 retained_intron
ENST00000540498 (ZNF664-014) 123997778-123998753 processed_transcript
ENST00000541448 (ZNF664-010) 123973215-124011778 processed_transcript
ENST00000542493 (ZNF664-008) 123973241-124011650 processed_transcript
ENST00000542820 (ZNF664-006) 123973219-123974553 retained_intron
ENST00000543017 (ZNF664-011) 123973273-124011773 processed_transcript
ENST00000546098 (ZNF664-005) 123973485-124011703 processed_transcript
ENST00000619033 (ZNF664-201) 123973215-124015438 protein_coding
ENSG00000197653 (DNAH10)
dynein, axonemal, heavy chain 10 		ENST00000409039 (DNAH10-001) 123762188-123936206 protein_coding
ENST00000447853 (DNAH10-006) 123781127-123813898 retained_intron
ENST00000467219 (DNAH10-004) 123781104-123814257 retained_intron
ENST00000492261 (DNAH10-003) 123925135-123935713 retained_intron
ENST00000497783 (DNAH10-002) 123835439-123882237 nonsense_mediated_decay
ENST00000538983 (DNAH10-009) 123931791-123933439 nonsense_mediated_decay
ENST00000540041 (DNAH10-007) 123908313-123914550 protein_coding
ENST00000545078 (DNAH10-008) 123926766-123929739 retained_intron
ENST00000614082 (DNAH10-201) 123762495-123813661 protein_coding
ENSG00000269938 (RP11-214K3.20)
 ENST00000602601 (RP11-214K3.20-001) 123968023-123968579 sense_intronic
ENSG00000269997 (RP11-214K3.21)
 ENST00000602988 (RP11-214K3.21-001) 123966077-123966629 sense_intronic
ENSG00000270028 (RP11-380L11.4)
 ENST00000602952 (RP11-380L11.4-001) 123925461-123926083 antisense
ENSG00000270048 (RP11-214K3.22)
 ENST00000602474 (RP11-214K3.22-001) 123962555-123962817 sense_intronic
ENSG00000270061 (RP11-214K3.19)
 ENST00000602741 (RP11-214K3.19-001) 123969990-123970344 sense_intronic
ENSG00000270095 (RP11-214K3.18)
 ENST00000602558 (RP11-214K3.18-001) 123971457-123971714 sense_intronic
ENSG00000270130 (RP11-214K3.23)
 ENST00000602347 (RP11-214K3.23-001) 123960717-123961244 sense_intronic

Homo sapiens Ensembl (GRCh38)

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CIL_000393_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000038011-ENSMUSG00000037979 CGP 10090 5:124725085-124862424
GeneTranscriptPositionBiotype
ENSMUSG00000037979 (Ccdc92)
coiled-coil domain containing 92 		ENSMUST00000036206 (Ccdc92-001) 124834418-124862424 protein_coding
ENSMUST00000135495 (Ccdc92-002) 124834418-124861885 nonsense_mediated_decay
ENSMUST00000143268 (Ccdc92-004) 124836070-124851583 protein_coding
ENSMUSG00000038011 (Dnah10)
dynein, axonemal, heavy chain 10 		ENSMUST00000058440 (Dnah10-201) 124725085-124834308 protein_coding
ENSMUST00000126998 (Dnah10-003) 124791740-124796345 nonsense_mediated_decay
ENSMUST00000141137 (Dnah10-001) 124731391-124834303 protein_coding

Mus musculus Ensembl (GRCm38)

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Structures from Ensembl
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Transcripts
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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000393_0001ENSG00000119242ENST00000238156ENST00000545891ENSG00000179195ENST00000337815ENST00000392404ENST00000538932ENST00000619033ENSG00000197653ENST00000409039ENSG00000269938ENST00000602601ENSG00000269997ENST00000602988ENSG00000270028ENST00000602952ENSG00000270048ENST00000602474ENSG00000270061ENST00000602741ENSG00000270095ENST00000602558ENSG00000270130ENST00000602347CIL_000393_0002ENSMUSG00000037979ENSMUST00000036206ENSMUST00000135495ENSMUST00000143268ENSMUSG00000038011ENSMUST00000058440ENSMUST00000141137
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000119242 ENST00000238156 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.658±0.00 N/A N/A N/A
ENST00000535556 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000539551 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000539761 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000542348 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000544798 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000545037 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000545135 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000545891 47.891±0.00 29.714±0.00 N/A 38.662±30.73 57.646±0.00 35.542±0.00 36.961±0.00 4.670±0.00 15.654±0.00 35.370±0.00 15.552±12.55 36.453±17.66 35.256±3.81 94.359±31.22
ENSG00000179195 ENST00000337815 10.741±0.00 10.687±0.00 9.852±0.00 11.512±8.53 6.024±0.00 10.889±5.01 14.690±0.00 18.080±0.00 6.928±4.38 12.645±0.00 6.795±0.00 12.918±6.60 11.534±0.00 12.438±1.44
ENST00000392404 10.179±0.00 N/A N/A 5.226±2.84 15.184±0.00 4.734±0.00 4.007±1.99 17.090±0.00 2.874±0.00 7.323±0.37 N/A 9.003±0.00 N/A 5.782±0.00
ENST00000537532 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000538932 N/A N/A N/A 2.393±0.00 4.164±0.00 11.006±0.00 1.049±0.00 5.241±0.00 5.655±0.00 N/A N/A 8.128±2.62 9.147±0.00 N/A
ENST00000539257 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000539501 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000539644 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000540009 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000540498 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000541448 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000542493 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000542820 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000543017 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000546098 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000619033 N/A N/A N/A N/A 9.504±0.00 N/A 2.350±0.00 N/A N/A 4.374±0.00 4.172±0.00 N/A N/A N/A
ENSG00000197653 ENST00000409039 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.985±0.00 N/A N/A N/A 2.083±0.00
ENST00000447853 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467219 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492261 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497783 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000538983 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000540041 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000545078 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000614082 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000269938 ENST00000602601 0.092±0.00 0.342±0.00 1.306±0.00 0.730±0.18 0.670±0.45 0.095±0.00 0.153±0.00 0.718±0.49 1.368±0.00 2.315±2.21 N/A 0.544±0.64 0.112±0.06 0.422±0.04
ENSG00000269997 ENST00000602988 0.044±0.00 0.156±0.00 N/A 0.891±0.55 3.592±0.00 0.120±0.00 0.218±0.00 0.804±0.40 2.584±0.00 1.398±0.73 N/A 1.360±1.88 0.119±0.04 0.996±0.07
ENSG00000270028 ENST00000602952 0.656±0.00 0.332±0.00 0.147±0.00 1.407±1.21 0.373±0.00 0.541±0.00 0.319±0.18 1.809±0.00 0.326±0.04 0.693±0.55 0.228±0.00 0.302±0.13 0.197±0.09 0.625±0.05
ENSG00000270048 ENST00000602474 N/A N/A 2.259±0.00 0.538±0.00 N/A 0.320±0.00 0.257±0.00 0.566±0.00 N/A N/A N/A 0.383±0.13 N/A 0.585±0.39
ENSG00000270061 ENST00000602741 0.085±0.00 0.459±0.00 1.654±0.00 0.523±0.29 0.268±0.00 1.244±0.94 0.615±0.53 0.083±0.00 0.038±0.00 0.494±0.38 N/A 0.808±0.58 0.383±0.14 1.304±1.11
ENSG00000270095 ENST00000602558 N/A N/A 1.367±0.00 2.238±1.70 6.562±0.00 0.889±0.00 1.136±0.88 0.465±0.00 12.451±0.00 15.601±0.00 N/A 0.284±0.09 0.199±0.00 0.289±0.10
ENSG00000270130 ENST00000602347 N/A 0.090±0.00 N/A 0.698±0.51 0.065±0.00 0.041±0.00 0.291±0.14 0.615±0.53 0.725±0.00 0.583±0.51 0.082±0.00 0.205±0.03 N/A 0.078±0.06
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000037979 ENSMUST00000036206 0.674±0.56 2.052±0.65 2.691±0.02 10.300±1.56 3.481±0.82 2.087±0.30 0.261±0.18 2.129±0.79 0.136±0.04 7.072±0.70 0.206±0.06 4.266±1.18 1.794±0.89 26.501±0.00
ENSMUST00000135495 0.084±0.00 0.418±0.00 N/A N/A N/A N/A 0.309±0.00 N/A 0.066±0.01 N/A 0.099±0.07 N/A N/A 70.420±14.02
ENSMUST00000143268 N/A N/A N/A 125.275±0.00 N/A N/A N/A N/A N/A N/A 0.207±0.05 12.936±0.00 11.859±5.49 1843.720±0.00
ENSMUSG00000038011 ENSMUST00000058440 N/A N/A N/A 0.043±0.00 0.024±0.00 0.038±0.01 0.043±0.03 0.024±0.01 N/A 1.031±0.36 N/A 0.475±0.23 0.022±0.00 3.939±0.13
ENSMUST00000126998 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141137 0.025±0.02 0.047±0.02 0.009±0.00 0.042±0.00 0.036±0.01 0.030±0.02 0.004±0.00 0.029±0.01 0.007±0.00 0.565±0.00 0.007±0.00 0.521±0.26 0.206±0.07 3.700±2.69

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