C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_000396_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000185344-ENSG00000197653 CGP 9606 12:123712318-123936206
GeneTranscriptPositionBiotype
ENSG00000119242 (CCDC92)
coiled-coil domain containing 92
ENST00000238156 (CCDC92-001) 123935622-123972824 protein_coding
ENST00000535556 (CCDC92-007) 123937714-123972616 protein_coding
ENST00000539551 (CCDC92-006) 123937765-123972090 protein_coding
ENST00000539761 (CCDC92-004) 123937688-123972051 protein_coding
ENST00000542348 (CCDC92-009) 123918660-123943495 processed_transcript
ENST00000544798 (CCDC92-008) 123922922-123944369 processed_transcript
ENST00000545037 (CCDC92-005) 123944270-123972831 protein_coding
ENST00000545135 (CCDC92-002) 123936417-123946773 protein_coding
ENST00000545891 (CCDC92-003) 123936436-123972734 protein_coding
ENSG00000185344 (ATP6V0A2)
ATPase, H+ transporting, lysosomal V0 subunit a2
ENST00000330342 (ATP6V0A2-001) 123712318-123761755 protein_coding
ENST00000504192 (ATP6V0A2-003) 123723210-123744645 protein_coding
ENST00000534943 (ATP6V0A2-006) 123749996-123758015 protein_coding
ENST00000536426 (ATP6V0A2-005) 123738959-123747726 processed_transcript
ENST00000540368 (ATP6V0A2-002) 123712356-123737502 retained_intron
ENST00000543687 (ATP6V0A2-008) 123756327-123758687 processed_transcript
ENST00000544833 (ATP6V0A2-007) 123753991-123758220 protein_coding
ENST00000545059 (ATP6V0A2-004) 123730642-123744963 retained_intron
ENST00000613625 (ATP6V0A2-201) 123712356-123737687 protein_coding
ENSG00000197653 (DNAH10)
dynein, axonemal, heavy chain 10
ENST00000409039 (DNAH10-001) 123762188-123936206 protein_coding
ENST00000447853 (DNAH10-006) 123781127-123813898 retained_intron
ENST00000467219 (DNAH10-004) 123781104-123814257 retained_intron
ENST00000492261 (DNAH10-003) 123925135-123935713 retained_intron
ENST00000497783 (DNAH10-002) 123835439-123882237 nonsense_mediated_decay
ENST00000538983 (DNAH10-009) 123931791-123933439 nonsense_mediated_decay
ENST00000540041 (DNAH10-007) 123908313-123914550 protein_coding
ENST00000545078 (DNAH10-008) 123926766-123929739 retained_intron
ENST00000614082 (DNAH10-201) 123762495-123813661 protein_coding
ENSG00000239215 (RPL27P12)
ribosomal protein L27 pseudogene 12
ENST00000472241 (RPL27P12-001) 123721246-123721639 processed_pseudogene
ENSG00000270028 (RP11-380L11.4)
ENST00000602952 (RP11-380L11.4-001) 123925461-123926083 antisense
CIL_000396_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000038023-ENSMUSG00000038011 CGP 10090 5:124629067-124834308
GeneTranscriptPositionBiotype
ENSMUSG00000038011 (Dnah10)
dynein, axonemal, heavy chain 10
ENSMUST00000058440 (Dnah10-201) 124725085-124834308 protein_coding
ENSMUST00000126998 (Dnah10-003) 124791740-124796345 nonsense_mediated_decay
ENSMUST00000141137 (Dnah10-001) 124731391-124834303 protein_coding
ENSMUSG00000038023 (Atp6v0a2)
ATPase, H+ transporting, lysosomal V0 subunit A2
ENSMUST00000037865 (Atp6v0a2-201) 124629067-124722144 protein_coding
ENSMUSG00000088650 (Gm24854)
predicted gene, 24854
ENSMUST00000158025 (Gm24854-201) 124717077-124717174 snRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000396_0001ENSG00000119242ENST00000238156ENST00000535556ENST00000539551ENST00000539761ENST00000542348ENST00000544798ENST00000545037ENST00000545135ENST00000545891ENSG00000185344ENST00000330342ENST00000504192ENST00000534943ENST00000536426ENST00000540368ENST00000543687ENST00000544833ENST00000545059ENST00000613625ENSG00000197653ENST00000409039ENST00000447853ENST00000467219ENST00000492261ENST00000497783ENST00000538983ENST00000540041ENST00000545078ENST00000614082ENSG00000239215ENST00000472241ENSG00000270028ENST00000602952CIL_000396_0002ENSMUSG00000038011ENSMUST00000058440ENSMUST00000126998ENSMUST00000141137ENSMUSG00000038023ENSMUST00000037865ENSMUSG00000088650ENSMUST00000158025
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000396_0001ENSG00000119242ENST00000238156ENST00000545891ENSG00000185344ENST00000330342ENST00000504192ENST00000540368ENST00000545059ENSG00000197653ENST00000409039ENSG00000239215ENST00000472241ENSG00000270028ENST00000602952CIL_000396_0002ENSMUSG00000038011ENSMUST00000058440ENSMUST00000141137ENSMUSG00000038023ENSMUST00000037865ENSMUSG00000088650ENSMUST00000158025
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000119242 ENST00000238156 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.658±0.00 N/A N/A N/A
ENST00000535556 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000539551 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000539761 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000542348 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000544798 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000545037 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000545135 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000545891 47.891±0.00 29.714±0.00 N/A 38.662±30.73 57.646±0.00 35.542±0.00 36.961±0.00 4.670±0.00 15.654±0.00 35.370±0.00 15.552±12.55 36.453±17.66 35.256±3.81 94.359±31.22
ENSG00000185344 ENST00000330342 2.212±0.00 3.336±0.00 0.924±0.00 1.011±0.33 2.438±0.26 1.185±0.40 1.042±0.54 1.518±1.15 1.637±0.08 1.517±0.37 1.334±1.03 2.594±0.70 1.241±0.40 3.285±0.52
ENST00000504192 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.129±0.00 N/A N/A N/A N/A
ENST00000534943 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000536426 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000540368 N/A N/A N/A N/A 2.196±0.00 N/A 0.656±0.00 0.470±0.00 1.799±0.00 N/A N/A 2.776±0.00 1.234±0.00 N/A
ENST00000543687 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000544833 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000545059 N/A N/A N/A N/A 1.165±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000613625 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000197653 ENST00000409039 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.985±0.00 N/A N/A N/A 2.083±0.00
ENST00000447853 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467219 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492261 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497783 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000538983 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000540041 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000545078 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000614082 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000239215 ENST00000472241 N/A N/A N/A 0.044±0.00 N/A N/A N/A N/A N/A 2.203±0.00 N/A N/A N/A N/A
ENSG00000270028 ENST00000602952 0.656±0.00 0.332±0.00 0.147±0.00 1.407±1.21 0.373±0.00 0.541±0.00 0.319±0.18 1.809±0.00 0.326±0.04 0.693±0.55 0.228±0.00 0.302±0.13 0.197±0.09 0.625±0.05
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000038011 ENSMUST00000058440 N/A N/A N/A 0.043±0.00 0.024±0.00 0.038±0.01 0.043±0.03 0.024±0.01 N/A 1.031±0.36 N/A 0.475±0.23 0.022±0.00 3.939±0.13
ENSMUST00000126998 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141137 0.025±0.02 0.047±0.02 0.009±0.00 0.042±0.00 0.036±0.01 0.030±0.02 0.004±0.00 0.029±0.01 0.007±0.00 0.565±0.00 0.007±0.00 0.521±0.26 0.206±0.07 3.700±2.69
ENSMUSG00000038023 ENSMUST00000037865 22.244±5.81 21.060±3.63 17.838±0.47 9.609±4.55 25.807±6.65 39.201±8.45 9.216±2.98 16.439±5.53 5.406±2.73 16.541±4.24 2.091±0.21 23.028±6.17 10.899±3.58 7.063±3.66
ENSMUSG00000088650 ENSMUST00000158025 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 367.126±0.00 N/A

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