C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00039S_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000032614-ENSDARG00000006062 CGP 7955 15:29805601-30154902
GeneTranscriptPositionBiotype
ENSDARG00000006062 (akap1b)
A kinase (PRKA) anchor protein 1b 		ENSDART00000025713 (akap1b-201) 30135828-30150773 protein_coding
ENSDART00000112511 (akap1b-202) 30137947-30154790 protein_coding
ENSDART00000134878 (akap1b-003) 30141941-30146715 processed_transcript
ENSDART00000136673 (akap1b-004) 30141660-30146134 retained_intron
ENSDART00000138988 (akap1b-001) 30137945-30154902 protein_coding
CIL_00039S_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000069769-ENSMUSG00000018428 CGP 10090 11:88339382-88864586
GeneTranscriptPositionBiotype
ENSMUSG00000018428 (Akap1)
A kinase (PRKA) anchor protein 1 		ENSMUST00000018572 (Akap1-002) 88830792-88864586 protein_coding
ENSMUST00000107903 (Akap1-001) 88830792-88851503 protein_coding
ENSMUST00000107904 (Akap1-006) 88831755-88863717 protein_coding
ENSMUST00000143720 (Akap1-003) 88830792-88851503 nonsense_mediated_decay
ENSMUST00000153787 (Akap1-004) 88838972-88844498 nonsense_mediated_decay
ENSMUST00000153961 (Akap1-005) 88837012-88841540 retained_intron
ENSMUSG00000069769 (Msi2)
musashi RNA-binding protein 2 		ENSMUST00000092794 (Msi2-006) 88343889-88718101 protein_coding
ENSMUST00000107908 (Msi2-005) 88685954-88718182 protein_coding
ENSMUST00000107909 (Msi2-001) 88339382-88718229 protein_coding
ENSMUST00000126293 (Msi2-004) 88712188-88718212 processed_transcript
ENSMUST00000138790 (Msi2-002) 88477964-88718110 retained_intron
ENSMUST00000144699 (Msi2-003) 88590055-88718513 protein_coding
ENSMUST00000148013 (Msi2-007) 88365515-88590147 retained_intron
ENSMUSG00000084411 (Gm11510)
predicted gene 11510 		ENSMUST00000120278 (Gm11510-001) 88432986-88433514 processed_pseudogene
ENSMUSG00000085246 (Gm15893)
predicted gene 15893 		ENSMUST00000143208 (Gm15893-001) 88356291-88363947 antisense
ENSMUSG00000085646 (Gm11493)
predicted gene 11493 		ENSMUST00000134567 (Gm11493-001) 88741011-88743369 lincRNA
ENSMUSG00000087574 (C030037D09Rik)
RIKEN cDNA C030037D09 gene 		ENSMUST00000125967 (C030037D09Rik-003) 88720489-88724173 lincRNA
ENSMUST00000136201 (C030037D09Rik-002) 88718804-88728893 lincRNA
ENSMUST00000138007 (C030037D09Rik-001) 88718645-88722600 lincRNA
ENSMUSG00000092399 (4930556N13Rik)
RIKEN cDNA 4930556N13 gene 		ENSMUST00000173677 (4930556N13Rik-001) 88851604-88881395 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00039S_0001ENSDARG00000006062ENSDART00000025713ENSDART00000112511ENSDART00000134878ENSDART00000136673ENSDART00000138988CIL_00039S_0002ENSMUSG00000018428ENSMUST00000018572ENSMUST00000107903ENSMUST00000107904ENSMUST00000143720ENSMUST00000153787ENSMUST00000153961ENSMUSG00000069769ENSMUST00000092794ENSMUST00000107908ENSMUST00000107909ENSMUST00000126293ENSMUST00000138790ENSMUST00000144699ENSMUST00000148013ENSMUSG00000084411ENSMUST00000120278ENSMUSG00000085246ENSMUST00000143208ENSMUSG00000085646ENSMUST00000134567ENSMUSG00000087574ENSMUST00000125967ENSMUST00000136201ENSMUST00000138007ENSMUSG00000092399ENSMUST00000173677
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00039S_0001ENSDARG00000006062ENSDART00000025713ENSDART00000112511ENSDART00000138988CIL_00039S_0002ENSMUSG00000018428ENSMUST00000018572ENSMUST00000107903ENSMUST00000107904ENSMUST00000143720ENSMUST00000153787ENSMUSG00000069769ENSMUST00000092794ENSMUST00000107909ENSMUST00000144699ENSMUSG00000084411ENSMUST00000120278ENSMUSG00000085246ENSMUST00000143208ENSMUSG00000085646ENSMUST00000134567ENSMUSG00000087574ENSMUST00000125967ENSMUST00000136201ENSMUST00000138007ENSMUSG00000092399ENSMUST00000173677
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000006062 ENSDART00000025713 N/A N/A N/A 3.791±0.02 N/A N/A 2.100±0.41 4.425±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000112511 N/A N/A N/A N/A N/A N/A N/A 9.414±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000134878 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000136673 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000138988 N/A N/A N/A N/A N/A N/A N/A 8.611±0.00 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000018428 ENSMUST00000018572 11.049±5.43 11.185±2.01 13.531±0.72 11.907±4.38 8.304±2.33 11.184±1.36 16.115±2.09 12.579±2.78 11.416±5.23 6.390±1.02 15.012±1.84 9.268±3.03 9.928±4.84 N/A
ENSMUST00000107903 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.540±2.69 9.184±4.96 97.802±8.57
ENSMUST00000107904 14.715±3.86 18.707±3.95 3.916±0.07 9.319±2.94 14.986±3.40 17.623±2.48 18.928±3.15 11.509±2.11 7.065±4.33 5.364±0.13 4.565±1.21 18.387±4.68 6.018±2.95 102.873±60.95
ENSMUST00000143720 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 101.121±46.28
ENSMUST00000153787 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 121.956±0.00
ENSMUST00000153961 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000069769 ENSMUST00000092794 6.829±1.58 25.735±7.10 8.495±0.00 21.924±1.47 9.287±3.68 11.221±1.29 13.250±1.58 12.634±1.17 3.514±1.11 11.590±1.66 11.306±0.00 29.432±6.94 3.254±1.23 27.828±12.33
ENSMUST00000107908 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000107909 5.542±2.15 9.466±5.17 16.579±1.31 20.375±9.94 4.806±1.53 10.528±2.81 4.240±0.00 9.164±2.16 2.559±1.18 13.191±2.08 8.973±3.81 19.936±6.89 1.707±0.52 3.233±2.04
ENSMUST00000126293 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138790 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144699 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 59.535±0.00
ENSMUST00000148013 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000084411 ENSMUST00000120278 N/A N/A 0.209±0.16 0.189±0.02 N/A N/A N/A 0.242±0.00 N/A N/A 0.328±0.13 0.445±0.18 0.101±0.07 N/A
ENSMUSG00000085246 ENSMUST00000143208 0.169±0.11 0.525±0.19 0.189±0.08 0.589±0.31 0.198±0.11 0.226±0.10 0.304±0.07 0.214±0.03 0.080±0.05 0.352±0.06 0.092±0.06 0.577±0.42 0.058±0.03 0.249±0.09
ENSMUSG00000085646 ENSMUST00000134567 N/A N/A N/A N/A N/A N/A N/A N/A 0.016±0.00 N/A N/A 0.156±0.00 0.035±0.00 0.112±0.04
ENSMUSG00000087574 ENSMUST00000125967 N/A N/A N/A N/A N/A 2.969±0.00 N/A N/A N/A N/A N/A N/A 0.353±0.00 N/A
ENSMUST00000136201 N/A 1.099±0.15 1.090±0.06 0.934±0.38 0.662±0.09 0.889±0.00 1.569±0.40 1.110±0.16 0.491±0.06 0.680±0.03 0.931±0.40 0.722±0.02 0.304±0.17 22.063±0.91
ENSMUST00000138007 1.236±0.40 2.310±0.41 0.592±0.01 0.388±0.11 0.722±0.31 1.408±0.30 0.901±0.47 1.352±0.84 0.458±0.22 2.113±0.51 0.109±0.04 2.371±1.07 0.157±0.11 9.837±5.27
ENSMUSG00000092399 ENSMUST00000173677 0.165±0.07 0.215±0.09 0.044±0.01 0.053±0.01 0.106±0.03 0.188±0.05 0.097±0.03 0.156±0.09 0.185±0.18 0.146±0.05 0.056±0.00 0.316±0.17 0.089±0.06 1.773±0.53

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