C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003A1_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000214102-ENSG00000106028 CGP 9606 7:141708353-141787922
GeneTranscriptPositionBiotype
ENSG00000106028 (SSBP1)
single-stranded DNA binding protein 1, mitochondrial 		ENST00000265304 (SSBP1-001) 141738321-141750461 protein_coding
ENST00000461433 (SSBP1-004) 141738401-141740714 retained_intron
ENST00000463093 (SSBP1-008) 141738401-141745545 protein_coding
ENST00000465167 (SSBP1-013) 141738406-141750332 processed_transcript
ENST00000465582 (SSBP1-014) 141738400-141787922 protein_coding
ENST00000467681 (SSBP1-007) 141738396-141750314 protein_coding
ENST00000468267 (SSBP1-009) 141738409-141739756 retained_intron
ENST00000469123 (SSBP1-012) 141738391-141750456 processed_transcript
ENST00000473783 (SSBP1-011) 141738603-141742229 protein_coding
ENST00000481508 (SSBP1-006) 141738607-141750461 protein_coding
ENST00000484178 (SSBP1-010) 141738600-141750461 protein_coding
ENST00000489378 (SSBP1-003) 141738365-141746526 retained_intron
ENST00000496622 (SSBP1-002) 141738358-141741690 retained_intron
ENST00000498107 (SSBP1-005) 141738358-141750354 protein_coding
ENST00000612337 (SSBP1-201) 141738334-141750488 protein_coding
ENSG00000127362 (TAS2R3)
taste receptor, type 2, member 3 		ENST00000247879 (TAS2R3-001) 141764097-141765197 protein_coding
ENSG00000127364 (TAS2R4)
taste receptor, type 2, member 4 		ENST00000247881 (TAS2R4-001) 141778442-141780819 protein_coding
CIL_0003A1_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000037159-ENSMUSG00000029911 CGP 10090 6:40442863-40481823
GeneTranscriptPositionBiotype
ENSMUSG00000029911 (Ssbp1)
single-stranded DNA binding protein 1 		ENSMUST00000031971 (Ssbp1-002) 40471415-40478587 protein_coding
ENSMUST00000114779 (Ssbp1-001) 40471352-40481823 protein_coding
ENSMUST00000117411 (Ssbp1-004) 40471475-40480992 protein_coding
ENSMUST00000117830 (Ssbp1-005) 40471526-40476511 protein_coding
ENSMUST00000121360 (Ssbp1-003) 40471468-40480995 protein_coding
ENSMUST00000141801 (Ssbp1-006) 40476479-40477450 retained_intron
ENSMUSG00000037159 (Wee2)
WEE1 homolog 2 (S. pombe) 		ENSMUST00000038907 (Wee2-001) 40442863-40466813 protein_coding
ENSMUST00000141490 (Wee2-002) 40442937-40444154 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003A1_0001ENSG00000106028ENST00000265304ENST00000461433ENST00000463093ENST00000465167ENST00000465582ENST00000467681ENST00000468267ENST00000469123ENST00000473783ENST00000481508ENST00000484178ENST00000489378ENST00000496622ENST00000498107ENST00000612337ENSG00000127362ENST00000247879ENSG00000127364ENST00000247881CIL_0003A1_0002ENSMUSG00000029911ENSMUST00000031971ENSMUST00000114779ENSMUST00000117411ENSMUST00000117830ENSMUST00000121360ENSMUST00000141801ENSMUSG00000037159ENSMUST00000038907ENSMUST00000141490
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003A1_0001ENSG00000106028ENST00000265304ENST00000463093ENST00000465167ENST00000465582ENST00000469123ENST00000496622ENST00000498107ENST00000612337ENSG00000127362ENST00000247879ENSG00000127364ENST00000247881CIL_0003A1_0002ENSMUSG00000029911ENSMUST00000031971ENSMUST00000114779ENSMUST00000117411ENSMUST00000121360ENSMUSG00000037159ENSMUST00000038907ENSMUST00000141490
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000106028 ENST00000265304 41.966±0.00 62.331±0.00 N/A 20.279±4.83 39.064±16.09 34.599±13.18 25.247±11.51 29.930±14.02 22.867±12.73 15.526±3.21 12.802±7.23 59.328±25.65 52.173±13.39 54.919±22.62
ENST00000461433 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000463093 16.308±0.00 N/A N/A 13.920±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465167 N/A N/A 16.013±0.00 N/A N/A 18.740±0.00 N/A N/A 14.516±0.00 N/A N/A N/A N/A N/A
ENST00000465582 N/A N/A N/A 13.060±0.00 7.786±0.00 N/A 6.428±0.00 5.669±0.00 11.896±0.00 N/A 4.873±0.00 N/A N/A N/A
ENST00000467681 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468267 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000469123 N/A N/A 14.721±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000473783 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000481508 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484178 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489378 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496622 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.437±0.00 N/A N/A N/A N/A
ENST00000498107 N/A 28.574±0.00 N/A 11.258±7.13 N/A 17.354±0.00 12.979±0.00 27.039±0.00 N/A 10.893±0.00 6.379±4.00 25.772±1.78 14.138±2.33 18.280±5.50
ENST00000612337 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.942±0.00 N/A N/A
ENSG00000127362 ENST00000247879 N/A 0.074±0.00 0.601±0.00 0.168±0.08 0.548±0.00 0.049±0.00 0.054±0.04 0.740±0.00 0.705±0.00 1.630±0.00 N/A 0.174±0.16 N/A 0.011±0.00
ENSG00000127364 ENST00000247881 0.014±0.00 0.357±0.00 0.439±0.00 0.337±0.01 0.250±0.06 0.295±0.22 0.191±0.14 0.448±0.18 0.298±0.28 0.347±0.33 0.034±0.00 0.521±0.44 0.099±0.09 0.292±0.13
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029911 ENSMUST00000031971 1.570±0.45 N/A N/A 4.297±0.00 2.290±1.17 N/A 2.111±0.83 1.708±0.48 7.148±4.70 1.405±0.31 N/A 4.665±0.24 N/A 0.900±0.07
ENSMUST00000114779 N/A N/A N/A 2.925±1.37 0.957±0.40 N/A 1.106±0.39 1.065±0.31 1.185±0.25 0.994±0.03 1.746±0.34 4.194±0.31 N/A 0.616±0.16
ENSMUST00000117411 4.030±0.77 15.922±5.12 6.539±0.32 7.368±0.04 3.373±1.41 3.398±1.39 4.748±0.78 4.078±0.92 7.908±4.86 3.255±0.55 12.664±1.07 11.056±7.07 15.283±11.23 4.053±5.32
ENSMUST00000117830 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000121360 4.223±1.09 7.655±2.53 13.783±4.03 7.270±3.16 8.998±5.44 7.580±2.58 1.230±0.14 3.974±1.84 6.914±3.95 5.598±1.04 2.995±0.86 13.270±6.17 6.713±0.77 2.322±1.07
ENSMUST00000141801 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000037159 ENSMUST00000038907 N/A N/A 0.002±0.00 0.029±0.02 N/A 0.037±0.00 0.021±0.00 N/A 0.004±0.00 N/A N/A 0.559±0.35 0.008±0.01 0.033±0.01
ENSMUST00000141490 N/A N/A N/A N/A N/A 0.158±0.01 N/A N/A N/A N/A N/A 1.113±0.64 0.011±0.00 0.048±0.00

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