C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0003B8_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000054771-ENSDARG00000074170 CGP 7955 8:32307225-32549199
GeneTranscriptPositionBiotype
ENSDARG00000054771 (ghra)
growth hormone receptor a
ENSDART00000018886 (ghra-001) 32313264-32454556 protein_coding
ENSDART00000127194 (ghra-201) 32307225-32419602 protein_coding
ENSDARG00000074170 (FBXO4)
F-box protein 4
ENSDART00000141799 (FBXO4-001) 32494073-32549199 protein_coding
ENSDART00000147730 (FBXO4-002) 32540301-32549072 nonsense_mediated_decay
CIL_0003B8_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000055737-ENSMUSG00000022184 CGP 10090 15:3317760-3979573
GeneTranscriptPositionBiotype
ENSMUSG00000022184 (Fbxo4)
F-box protein 4
ENSMUST00000022791 (Fbxo4-001) 3965445-3979573 protein_coding
ENSMUST00000148169 (Fbxo4-003) 3971284-3971982 retained_intron
ENSMUST00000148817 (Fbxo4-002) 3969038-3972860 processed_transcript
ENSMUSG00000055737 (Ghr)
growth hormone receptor
ENSMUST00000069451 (Ghr-005) 3317760-3583230 protein_coding
ENSMUST00000110697 (Ghr-010) 3327539-3471644 protein_coding
ENSMUST00000110698 (Ghr-002) 3327525-3583188 protein_coding
ENSMUST00000159508 (Ghr-006) 3346509-3583211 processed_transcript
ENSMUST00000159912 (Ghr-008) 3543837-3583187 processed_transcript
ENSMUST00000160343 (Ghr-007) 3341029-3583188 processed_transcript
ENSMUST00000161180 (Ghr-004) 3384309-3583492 retained_intron
ENSMUST00000161561 (Ghr-001) 3319009-3581842 protein_coding
ENSMUST00000161770 (Ghr-009) 3333439-3582596 protein_coding
ENSMUST00000162993 (Ghr-003) 3345227-3583212 retained_intron
ENSMUSG00000098177 (Gm4823)
predicted gene 4823
ENSMUST00000181990 (Gm4823-001) 3745892-3746875 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003B8_0001ENSDARG00000054771ENSDART00000018886ENSDART00000127194ENSDARG00000074170ENSDART00000141799ENSDART00000147730CIL_0003B8_0002ENSMUSG00000022184ENSMUST00000022791ENSMUST00000148169ENSMUST00000148817ENSMUSG00000055737ENSMUST00000069451ENSMUST00000110697ENSMUST00000110698ENSMUST00000159508ENSMUST00000159912ENSMUST00000160343ENSMUST00000161180ENSMUST00000161561ENSMUST00000161770ENSMUST00000162993ENSMUSG00000098177ENSMUST00000181990
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003B8_0001ENSDARG00000054771ENSDART00000018886ENSDART00000127194ENSDARG00000074170ENSDART00000141799ENSDART00000147730CIL_0003B8_0002ENSMUSG00000022184ENSMUST00000022791ENSMUST00000148817ENSMUSG00000055737ENSMUST00000069451ENSMUST00000110698ENSMUST00000159508ENSMUST00000161180ENSMUST00000161561ENSMUST00000161770ENSMUSG00000098177ENSMUST00000181990
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000054771 ENSDART00000018886 N/A N/A N/A N/A N/A N/A 0.317±0.00 1.055±0.00 0.577±0.00 N/A N/A N/A N/A N/A
ENSDART00000127194 N/A N/A N/A N/A N/A N/A 0.640±0.09 N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000074170 ENSDART00000141799 N/A N/A N/A 1.432±1.15 N/A N/A 0.889±0.00 0.721±0.31 0.106±0.00 N/A 0.820±0.00 N/A N/A N/A
ENSDART00000147730 N/A N/A N/A N/A N/A N/A N/A N/A 0.093±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022184 ENSMUST00000022791 12.485±0.37 14.755±4.18 10.312±1.29 2.378±1.07 10.615±3.47 7.400±2.13 3.752±0.18 6.076±0.61 3.802±1.28 10.518±1.59 1.239±0.34 7.785±3.11 2.899±1.32 3.903±2.03
ENSMUST00000148169 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148817 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.478±0.00 N/A
ENSMUSG00000055737 ENSMUST00000069451 58.627±42.14 9.995±5.53 12.725±0.19 1.315±0.01 34.739±6.86 4.376±0.91 13.124±0.90 39.957±5.50 21.331±15.77 10.951±1.50 23.158±0.70 9.806±3.52 12.447±11.39 0.150±0.04
ENSMUST00000110697 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000110698 140.647±91.49 N/A 10.264±1.38 1.570±0.00 49.543±9.97 N/A 14.942±2.18 65.065±8.79 42.623±35.91 14.786±2.35 N/A 24.048±2.55 10.656±5.61 0.825±0.50
ENSMUST00000159508 94.203±3.49 110.192±43.34 N/A N/A 164.405±48.12 18.282±2.15 N/A 114.595±9.32 108.925±27.46 33.638±3.22 N/A 39.215±6.28 N/A 0.684±0.00
ENSMUST00000159912 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000160343 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000161180 N/A 4.733±1.80 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000161561 61.413±41.20 6.384±0.00 N/A 0.718±0.00 37.333±17.35 N/A 7.453±1.37 48.293±2.56 21.940±1.12 6.676±0.29 N/A 8.774±2.11 2.018±1.42 0.343±0.19
ENSMUST00000161770 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.478±1.60 N/A 0.468±0.01
ENSMUST00000162993 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000098177 ENSMUST00000181990 N/A N/A N/A N/A 0.086±0.00 N/A N/A 0.060±0.03 0.006±0.00 0.053±0.00 N/A N/A 0.011±0.00 1.982±0.00

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