C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Region Summary |
| CIL_0003BF_0001 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSG00000121022-ENSG00000104218 | CGP | 9606 | 8:67043079-67196263  |
|
| Gene | Transcript | Position | Biotype | |
ENSG00000066777  (ARFGEF1)ADP-ribosylation factor guanine nucleotide-exchange factor 1 (brefeldin A-inhibited) |
ENST00000262215 (ARFGEF1-001)
|
67197649-67343677 | protein_coding | |
|
ENST00000517631 (ARFGEF1-011)
|
67227234-67228133 | protein_coding | ||
|
ENST00000517955 (ARFGEF1-009)
|
67198405-67201889 | processed_transcript | ||
|
ENST00000518230 (ARFGEF1-007)
|
67199929-67238497 | protein_coding | ||
|
ENST00000518290 (ARFGEF1-005)
|
67197674-67201805 | retained_intron | ||
|
ENST00000518789 (ARFGEF1-006)
|
67199011-67207190 | protein_coding | ||
|
ENST00000519436 (ARFGEF1-002)
|
67299314-67343677 | protein_coding | ||
|
ENST00000520381 (ARFGEF1-003)
|
67173512-67267444 | protein_coding | ||
|
ENST00000522878 (ARFGEF1-010)
|
67175487-67211529 | processed_transcript | ||
|
ENSG00000104218 (CSPP1) centrosome and spindle pole associated protein 1 |
ENST00000262210 (CSPP1-001)
|
67064368-67196263 | protein_coding | |
|
ENST00000519163 (CSPP1-002)
|
67064428-67159036 | nonsense_mediated_decay | ||
|
ENST00000519668 (CSPP1-003)
|
67083848-67195611 | protein_coding | ||
|
ENST00000519701 (CSPP1-004)
|
67064426-67091869 | nonsense_mediated_decay | ||
|
ENST00000521168 (CSPP1-007)
|
67157627-67195518 | processed_transcript | ||
|
ENST00000521324 (CSPP1-006)
|
67172512-67193577 | processed_transcript | ||
|
ENST00000521919 (CSPP1-005)
|
67062426-67093620 | protein_coding | ||
|
ENSG00000121022 (COPS5) COP9 signalosome subunit 5 |
ENST00000357849 (COPS5-001)
|
67043079-67062317 | protein_coding | |
|
ENST00000517406 (COPS5-008)
|
67059416-67062153 | nonsense_mediated_decay | ||
|
ENST00000517736 (COPS5-010)
|
67043079-67064943 | protein_coding | ||
|
ENST00000517793 (COPS5-005)
|
67058098-67064638 | processed_transcript | ||
|
ENST00000518374 (COPS5-004)
|
67043082-67062323 | nonsense_mediated_decay | ||
|
ENST00000518747 (COPS5-006)
|
67056533-67064274 | protein_coding | ||
|
ENST00000518768 (COPS5-011)
|
67061951-67083783 | processed_transcript | ||
|
ENST00000519057 (COPS5-013)
|
67061344-67083744 | processed_transcript | ||
|
ENST00000519963 (COPS5-007)
|
67060473-67083733 | processed_transcript | ||
|
ENST00000521386 (COPS5-003)
|
67043082-67061629 | retained_intron | ||
|
ENST00000521509 (COPS5-002)
|
67043079-67062336 | retained_intron | ||
|
ENST00000523086 (COPS5-009)
|
67043079-67056560 | processed_transcript | ||
|
ENST00000523890 (COPS5-012)
|
67045810-67062029 | nonsense_mediated_decay | ||
|
ENSG00000250869 (RP11-453N18.1) |
ENST00000508335 (RP11-453N18.1-001)
|
67133554-67135911 | processed_pseudogene | |
|
ENSG00000252637 (RNA5SP268) RNA, 5S ribosomal pseudogene 268 |
ENST00000516828 (RNA5SP268-201)
|
67099302-67099425 | rRNA | |
|
ENSG00000266491 (AC109335.1) |
ENST00000578628 (AC109335.1-201)
|
67058906-67059003 | miRNA | |
| CIL_0003BF_0002 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSMUSG00000025917-ENSMUSG00000056763 | CGP | 10090 | 1:10024601-10136768 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSMUSG00000025917 (Cops5) COP9 (constitutive photomorphogenic) homolog, subunit 5 (Arabidopsis thaliana) |
ENSMUST00000027050 (Cops5-001)
|
10024601-10038127 | protein_coding | |
|
ENSMUST00000139578 (Cops5-003)
|
10030920-10037938 | retained_intron | ||
|
ENSMUST00000150509 (Cops5-002)
|
10033040-10038168 | retained_intron | ||
|
ENSMUST00000186528 (Cops5-006)
|
10027198-10037941 | nonsense_mediated_decay | ||
|
ENSMUST00000188619 (Cops5-005)
|
10030687-10038149 | protein_coding | ||
|
ENSMUST00000190155 (Cops5-007)
|
10024843-10035128 | nonsense_mediated_decay | ||
|
ENSMUST00000191296 (Cops5-004)
|
10037280-10037945 | retained_intron | ||
|
ENSMUSG00000056763 (Cspp1) centrosome and spindle pole associated protein 1 |
ENSMUST00000071087 (Cspp1-004)
|
10038217-10136768 | protein_coding | |
|
ENSMUST00000117415 (Cspp1-001)
|
10038262-10067118 | protein_coding | ||
|
ENSMUST00000118263 (Cspp1-003)
|
10039773-10067976 | protein_coding | ||
|
ENSMUST00000119714 (Cspp1-005)
|
10039785-10067102 | protein_coding | ||
|
ENSMUST00000122156 (Cspp1-006)
|
10039773-10068333 | protein_coding | ||
|
ENSMUST00000123261 (Cspp1-011)
|
10087747-10090317 | retained_intron | ||
|
ENSMUST00000128164 (Cspp1-013)
|
10125984-10130018 | retained_intron | ||
|
ENSMUST00000134716 (Cspp1-009)
|
10039823-10059991 | retained_intron | ||
|
ENSMUST00000136283 (Cspp1-012)
|
10115425-10116731 | retained_intron | ||
|
ENSMUST00000136898 (Cspp1-014)
|
10129959-10133461 | retained_intron | ||
|
ENSMUST00000143606 (Cspp1-002)
|
10038226-10061771 | retained_intron | ||
|
ENSMUST00000148663 (Cspp1-015)
|
10133970-10136322 | retained_intron | ||
|
ENSMUST00000149214 (Cspp1-007)
|
10056924-10066575 | protein_coding | ||
|
ENSMUST00000153804 (Cspp1-010)
|
10074860-10084073 | retained_intron | ||
|
ENSMUST00000155974 (Cspp1-008)
|
10040155-10058823 | protein_coding | ||
|
ENSMUST00000185422 (Cspp1-025)
|
10095864-10108554 | retained_intron | ||
|
ENSMUST00000186294 (Cspp1-017)
|
10046493-10136145 | protein_coding | ||
|
ENSMUST00000187226 (Cspp1-027)
|
10112876-10134173 | nonsense_mediated_decay | ||
|
ENSMUST00000188249 (Cspp1-023)
|
10074382-10085817 | retained_intron | ||
|
ENSMUST00000188449 (Cspp1-024)
|
10074913-10090255 | nonsense_mediated_decay | ||
|
ENSMUST00000190063 (Cspp1-022)
|
10039777-10058858 | retained_intron | ||
|
ENSMUST00000190318 (Cspp1-018)
|
10071183-10076191 | retained_intron | ||
|
ENSMUST00000190610 (Cspp1-016)
|
10037987-10039342 | retained_intron | ||
|
ENSMUST00000190625 (Cspp1-026)
|
10104228-10108543 | retained_intron | ||
|
ENSMUST00000191012 (Cspp1-019)
|
10038006-10047534 | protein_coding | ||
|
ENSMUST00000191360 (Cspp1-020)
|
10038249-10059048 | retained_intron | ||
|
ENSMUST00000191521 (Cspp1-021)
|
10039767-10058872 | retained_intron | ||
Expression Patterns
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