C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003D3_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000020241-ENSDARG00000012409 CGP 7955 23:21786293-21809324
GeneTranscriptPositionBiotype
ENSDARG00000012409 (rnf207b)
ring finger protein 207b 		ENSDART00000077945 (rnf207b-201) 21794360-21808990 protein_coding
ENSDART00000138415 (rnf207b-001) 21793727-21808488 processed_transcript
ENSDART00000142000 (rnf207b-002) 21794360-21809324 protein_coding
ENSDARG00000020241 (icmt)
isoprenylcysteine carboxyl methyltransferase 		ENSDART00000025487 (icmt-001) 21786293-21793116 protein_coding

Danio rerio Ensembl (Zv9)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_0003D3_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000039662-ENSMUSG00000058498 CGP 10090 4:152297227-152318993
GeneTranscriptPositionBiotype
ENSMUSG00000039662 (Icmt)
isoprenylcysteine carboxyl methyltransferase 		ENSMUST00000048892 (Icmt-001) 152297227-152307121 protein_coding
ENSMUST00000125617 (Icmt-003) 152297656-152300754 processed_transcript
ENSMUST00000134242 (Icmt-004) 152305387-152307068 processed_transcript
ENSMUST00000151372 (Icmt-002) 152297304-152307120 nonsense_mediated_decay
ENSMUSG00000058498 (Rnf207)
ring finger protein 207 		ENSMUST00000076183 (Rnf207-010) 152307019-152318608 protein_coding
ENSMUST00000108688 (Rnf207-012) 152307311-152309033 retained_intron
ENSMUST00000123133 (Rnf207-003) 152314886-152318625 retained_intron
ENSMUST00000127565 (Rnf207-007) 152311716-152313348 retained_intron
ENSMUST00000130008 (Rnf207-001) 152313393-152318481 nonsense_mediated_decay
ENSMUST00000134269 (Rnf207-004) 152314553-152318993 retained_intron
ENSMUST00000135837 (Rnf207-008) 152311557-152313403 retained_intron
ENSMUST00000142427 (Rnf207-009) 152312834-152313400 retained_intron
ENSMUST00000143968 (Rnf207-006) 152313403-152315965 retained_intron
ENSMUST00000145311 (Rnf207-002) 152314555-152318619 retained_intron
ENSMUST00000146496 (Rnf207-005) 152315461-152316328 retained_intron
ENSMUST00000170820 (Rnf207-011) 152311384-152318458 protein_coding

Mus musculus Ensembl (GRCm38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003D3_0001ENSDARG00000012409ENSDART00000077945ENSDART00000138415ENSDART00000142000ENSDARG00000020241ENSDART00000025487CIL_0003D3_0002ENSMUSG00000039662ENSMUST00000048892ENSMUST00000125617ENSMUST00000134242ENSMUST00000151372ENSMUSG00000058498ENSMUST00000076183ENSMUST00000108688ENSMUST00000123133ENSMUST00000127565ENSMUST00000130008ENSMUST00000134269ENSMUST00000135837ENSMUST00000142427ENSMUST00000143968ENSMUST00000145311ENSMUST00000146496ENSMUST00000170820
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003D3_0001ENSDARG00000012409ENSDART00000077945ENSDART00000138415ENSDART00000142000ENSDARG00000020241ENSDART00000025487CIL_0003D3_0002ENSMUSG00000039662ENSMUST00000048892ENSMUST00000151372ENSMUSG00000058498ENSMUST00000076183ENSMUST00000123133
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000012409 ENSDART00000077945 N/A N/A N/A 0.138±0.00 N/A N/A N/A 0.282±0.00 0.059±0.00 N/A N/A N/A N/A N/A
ENSDART00000138415 N/A N/A N/A 0.098±0.07 N/A N/A 31.162±1.26 1.722±0.76 N/A N/A 1.709±0.00 N/A N/A N/A
ENSDART00000142000 N/A N/A N/A N/A N/A N/A 51.351±2.79 0.213±0.00 N/A N/A 0.335±0.00 N/A N/A N/A
ENSDARG00000020241 ENSDART00000025487 N/A N/A N/A 3.035±1.85 N/A N/A 5.797±2.02 6.702±0.50 1.282±0.00 N/A 2.061±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000039662 ENSMUST00000048892 13.670±2.48 33.658±1.20 12.467±0.71 4.176±0.56 10.800±3.52 17.698±1.75 10.646±0.98 13.435±0.62 6.073±2.09 17.587±1.21 6.986±0.84 17.928±4.90 4.729±0.99 22.243±6.36
ENSMUST00000125617 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134242 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151372 3.173±0.97 5.262±0.15 N/A 2.902±0.20 3.501±0.54 3.839±0.69 N/A 2.408±0.38 1.412±0.40 3.995±0.48 1.311±0.00 3.323±0.66 1.538±0.98 2.531±0.86
ENSMUSG00000058498 ENSMUST00000076183 N/A N/A 10.792±2.17 N/A N/A N/A 31.640±2.79 N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000108688 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000123133 N/A N/A N/A N/A N/A N/A 7.627±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000127565 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000130008 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134269 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135837 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142427 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143968 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145311 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146496 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000170820 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Loading