C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003D3_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000020241-ENSDARG00000012409 CGP 7955 23:21786293-21809324
GeneTranscriptPositionBiotype
ENSDARG00000012409 (rnf207b)
ring finger protein 207b 		ENSDART00000077945 (rnf207b-201) 21794360-21808990 protein_coding
ENSDART00000138415 (rnf207b-001) 21793727-21808488 processed_transcript
ENSDART00000142000 (rnf207b-002) 21794360-21809324 protein_coding
ENSDARG00000020241 (icmt)
isoprenylcysteine carboxyl methyltransferase 		ENSDART00000025487 (icmt-001) 21786293-21793116 protein_coding
CIL_0003D3_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000039662-ENSMUSG00000058498 CGP 10090 4:152297227-152318993
GeneTranscriptPositionBiotype
ENSMUSG00000039662 (Icmt)
isoprenylcysteine carboxyl methyltransferase 		ENSMUST00000048892 (Icmt-001) 152297227-152307121 protein_coding
ENSMUST00000125617 (Icmt-003) 152297656-152300754 processed_transcript
ENSMUST00000134242 (Icmt-004) 152305387-152307068 processed_transcript
ENSMUST00000151372 (Icmt-002) 152297304-152307120 nonsense_mediated_decay
ENSMUSG00000058498 (Rnf207)
ring finger protein 207 		ENSMUST00000076183 (Rnf207-010) 152307019-152318608 protein_coding
ENSMUST00000108688 (Rnf207-012) 152307311-152309033 retained_intron
ENSMUST00000123133 (Rnf207-003) 152314886-152318625 retained_intron
ENSMUST00000127565 (Rnf207-007) 152311716-152313348 retained_intron
ENSMUST00000130008 (Rnf207-001) 152313393-152318481 nonsense_mediated_decay
ENSMUST00000134269 (Rnf207-004) 152314553-152318993 retained_intron
ENSMUST00000135837 (Rnf207-008) 152311557-152313403 retained_intron
ENSMUST00000142427 (Rnf207-009) 152312834-152313400 retained_intron
ENSMUST00000143968 (Rnf207-006) 152313403-152315965 retained_intron
ENSMUST00000145311 (Rnf207-002) 152314555-152318619 retained_intron
ENSMUST00000146496 (Rnf207-005) 152315461-152316328 retained_intron
ENSMUST00000170820 (Rnf207-011) 152311384-152318458 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003D3_0001ENSDARG00000012409ENSDART00000077945ENSDART00000138415ENSDART00000142000ENSDARG00000020241ENSDART00000025487CIL_0003D3_0002ENSMUSG00000039662ENSMUST00000048892ENSMUST00000125617ENSMUST00000134242ENSMUST00000151372ENSMUSG00000058498ENSMUST00000076183ENSMUST00000108688ENSMUST00000123133ENSMUST00000127565ENSMUST00000130008ENSMUST00000134269ENSMUST00000135837ENSMUST00000142427ENSMUST00000143968ENSMUST00000145311ENSMUST00000146496ENSMUST00000170820
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003D3_0001ENSDARG00000012409ENSDART00000077945ENSDART00000138415ENSDART00000142000ENSDARG00000020241ENSDART00000025487CIL_0003D3_0002ENSMUSG00000039662ENSMUST00000048892ENSMUST00000151372ENSMUSG00000058498ENSMUST00000076183ENSMUST00000123133
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000012409 ENSDART00000077945 N/A N/A N/A 0.138±0.00 N/A N/A N/A 0.282±0.00 0.059±0.00 N/A N/A N/A N/A N/A
ENSDART00000138415 N/A N/A N/A 0.098±0.07 N/A N/A 31.162±1.26 1.722±0.76 N/A N/A 1.709±0.00 N/A N/A N/A
ENSDART00000142000 N/A N/A N/A N/A N/A N/A 51.351±2.79 0.213±0.00 N/A N/A 0.335±0.00 N/A N/A N/A
ENSDARG00000020241 ENSDART00000025487 N/A N/A N/A 3.035±1.85 N/A N/A 5.797±2.02 6.702±0.50 1.282±0.00 N/A 2.061±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000039662 ENSMUST00000048892 13.670±2.48 33.658±1.20 12.467±0.71 4.176±0.56 10.800±3.52 17.698±1.75 10.646±0.98 13.435±0.62 6.073±2.09 17.587±1.21 6.986±0.84 17.928±4.90 4.729±0.99 22.243±6.36
ENSMUST00000125617 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134242 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151372 3.173±0.97 5.262±0.15 N/A 2.902±0.20 3.501±0.54 3.839±0.69 N/A 2.408±0.38 1.412±0.40 3.995±0.48 1.311±0.00 3.323±0.66 1.538±0.98 2.531±0.86
ENSMUSG00000058498 ENSMUST00000076183 N/A N/A 10.792±2.17 N/A N/A N/A 31.640±2.79 N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000108688 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000123133 N/A N/A N/A N/A N/A N/A 7.627±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000127565 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000130008 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134269 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135837 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142427 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143968 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145311 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146496 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000170820 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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