C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003DD_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000020345-ENSDARG00000018000 CGP 7955 19:44296650-44444684
GeneTranscriptPositionBiotype
ENSDARG00000018000 (ubp1)
upstream binding protein 1 (LBP-1a) 		ENSDART00000108775 (ubp1-001) 44409607-44444684 protein_coding
ENSDART00000151653 (ubp1-002) 44409609-44440285 protein_coding
CIL_0003DD_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000033392-ENSMUSG00000009741 CGP 10090 9:113812586-113977199
GeneTranscriptPositionBiotype
ENSMUSG00000009741 (Ubp1)
upstream binding protein 1 		ENSMUST00000009885 (Ubp1-201) 113930934-113977199 protein_coding
ENSMUST00000084885 (Ubp1-202) 113930934-113977199 protein_coding
ENSMUST00000116492 (Ubp1-203) 113931564-113976817 protein_coding
ENSMUSG00000032507 (Fbxl2)
F-box and leucine-rich repeat protein 2 		ENSMUST00000035090 (Fbxl2-001) 113976707-114026761 protein_coding
ENSMUST00000117537 (Fbxl2-005) 113963637-114026729 protein_coding
ENSMUST00000127352 (Fbxl2-006) 113989394-114026774 retained_intron
ENSMUST00000139757 (Fbxl2-003) 113983339-113991504 retained_intron
ENSMUST00000141832 (Fbxl2-004) 114003442-114046191 processed_transcript
ENSMUST00000143180 (Fbxl2-002) 113978037-114026726 nonsense_mediated_decay
ENSMUSG00000033392 (Clasp2)
CLIP associating protein 2 		ENSMUST00000111838 (Clasp2-201) 113812586-113919697 protein_coding
ENSMUST00000163895 (Clasp2-202) 113812600-113918136 protein_coding
ENSMUST00000166734 (Clasp2-203) 113812586-113919697 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003DD_0001ENSDARG00000018000ENSDART00000108775ENSDART00000151653CIL_0003DD_0002ENSMUSG00000009741ENSMUST00000009885ENSMUST00000084885ENSMUST00000116492ENSMUSG00000032507ENSMUST00000035090ENSMUST00000117537ENSMUST00000127352ENSMUST00000139757ENSMUST00000141832ENSMUST00000143180ENSMUSG00000033392ENSMUST00000111838ENSMUST00000163895ENSMUST00000166734
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003DD_0001ENSDARG00000018000ENSDART00000108775ENSDART00000151653CIL_0003DD_0002ENSMUSG00000009741ENSMUST00000009885ENSMUST00000084885ENSMUST00000116492ENSMUSG00000032507ENSMUST00000035090ENSMUST00000143180ENSMUSG00000033392ENSMUST00000111838ENSMUST00000163895ENSMUST00000166734
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000018000 ENSDART00000108775 N/A N/A N/A N/A N/A N/A 1.472±0.00 N/A 0.969±0.00 N/A 7.804±0.00 N/A N/A N/A
ENSDART00000151653 N/A N/A N/A N/A N/A N/A 0.262±0.00 N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000009741 ENSMUST00000009885 8.450±1.73 N/A N/A 19.777±0.00 7.316±1.93 6.529±0.00 3.235±0.71 6.966±2.09 6.417±3.28 6.155±0.76 1.836±0.37 9.851±1.98 6.597±2.22 N/A
ENSMUST00000084885 15.568±2.03 12.523±4.29 8.657±0.32 17.894±14.68 12.235±1.88 11.256±3.32 10.251±0.94 11.647±0.84 7.766±3.02 16.458±4.04 3.794±0.88 14.806±8.71 7.864±3.90 1.668±0.00
ENSMUST00000116492 N/A N/A 10.359±0.00 N/A N/A N/A N/A N/A 17.236±5.56 N/A N/A N/A 9.756±3.93 15.996±1.85
ENSMUSG00000032507 ENSMUST00000035090 N/A N/A N/A 12.731±0.55 N/A N/A N/A N/A N/A N/A 1.119±0.19 4.636±0.32 4.042±0.32 N/A
ENSMUST00000117537 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000127352 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139757 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141832 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143180 N/A N/A N/A 10.098±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000033392 ENSMUST00000111838 N/A 5.189±0.00 N/A 20.292±6.30 1.427±0.30 0.786±0.29 N/A N/A 0.660±0.21 2.778±0.00 N/A 6.068±0.00 N/A N/A
ENSMUST00000163895 N/A N/A N/A 31.890±0.00 N/A N/A N/A N/A N/A N/A N/A 8.161±0.00 2.042±0.08 1.378±0.00
ENSMUST00000166734 4.769±0.53 8.801±2.53 N/A 15.259±0.40 2.389±1.33 0.801±0.30 1.393±0.55 4.068±0.28 1.150±0.87 2.780±0.00 N/A 8.937±6.21 1.332±0.89 0.379±0.14

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