C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003DJ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000079496-ENSDARG00000011830 CGP 7955 18:11506755-11681537
GeneTranscriptPositionBiotype
ENSDARG00000011830 (fgd4a)
FYVE, RhoGEF and PH domain containing 4a 		ENSDART00000018144 (fgd4a-201) 11596323-11677985 protein_coding
ENSDART00000125382 (fgd4a-202) 11645361-11681537 protein_coding
ENSDART00000150041 (fgd4a-001) 11596323-11645437 protein_coding
ENSDARG00000079496 (bicd1a)
bicaudal D homolog 1a 		ENSDART00000112671 (bicd1a-201) 11506755-11566641 protein_coding
ENSDART00000140854 (bicd1a-001) 11506755-11561896 protein_coding
CIL_0003DJ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000151746-ENSG00000139132 CGP 9606 12:32106835-32646050
GeneTranscriptPositionBiotype
ENSG00000139132 (FGD4)
FYVE, RhoGEF and PH domain containing 4 		ENST00000395740 (FGD4-003) 32502170-32638929 nonsense_mediated_decay
ENST00000427716 (FGD4-001) 32502160-32646050 protein_coding
ENST00000472289 (FGD4-005) 32502043-32582955 protein_coding
ENST00000473513 (FGD4-008) 32502161-32579640 processed_transcript
ENST00000479023 (FGD4-009) 32502179-32576344 processed_transcript
ENST00000493087 (FGD4-002) 32502134-32640650 nonsense_mediated_decay
ENST00000494275 (FGD4-006) 32502049-32582955 retained_intron
ENST00000494977 (FGD4-004) 32582379-32644751 nonsense_mediated_decay
ENST00000497153 (FGD4-007) 32502131-32576298 processed_transcript
ENST00000525053 (FGD4-011) 32534324-32640737 protein_coding
ENST00000531134 (FGD4-010) 32485972-32640739 protein_coding
ENST00000534526 (FGD4-013) 32399529-32640533 protein_coding
ENST00000546442 (FGD4-015) 32502184-32641519 protein_coding
ENST00000550091 (FGD4-016) 32399856-32582251 processed_transcript
ENST00000551984 (FGD4-014) 32502157-32640748 nonsense_mediated_decay
ENST00000583694 (FGD4-017) 32502217-32576448 protein_coding
ENSG00000151746 (BICD1)
bicaudal D homolog 1 (Drosophila) 		ENST00000281474 (BICD1-002) 32107229-32377877 protein_coding
ENST00000395758 (BICD1-003) 32107252-32377923 nonsense_mediated_decay
ENST00000547680 (BICD1-008) 32328402-32333065 protein_coding
ENST00000548411 (BICD1-001) 32107151-32383633 protein_coding
ENST00000550207 (BICD1-007) 32106885-32108329 protein_coding
ENST00000551086 (BICD1-006) 32107296-32108806 protein_coding
ENST00000551848 (BICD1-005) 32106835-32108796 protein_coding
ENST00000552160 (BICD1-004) 32334517-32338930 protein_coding
ENST00000552226 (BICD1-009) 32337499-32339120 retained_intron
ENST00000614004 (BICD1-010) 32367534-32368062 retained_intron
ENSG00000207176 (Y_RNA)
Y RNA 		ENST00000384447 (Y_RNA.1-699) 32396050-32396147 misc_RNA
ENSG00000258134 (RP11-956A19.1)
 ENST00000549976 (RP11-956A19.1-001) 32227410-32228154 processed_pseudogene
ENSG00000274964 (RP11-817I4.1)
 ENST00000622688 (RP11-817I4.1-001) 32339368-32340724 sense_intronic
ENSG00000276115 (RP11-817I4.2)
 ENST00000614539 (RP11-817I4.2-001) 32352349-32354144 sense_intronic
ENSG00000277342 (RP11-843B15.4)
 ENST00000619744 (RP11-843B15.4-001) 32109076-32109602 sense_intronic

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003DJ_0001ENSDARG00000011830ENSDART00000018144ENSDART00000125382ENSDART00000150041ENSDARG00000079496ENSDART00000112671ENSDART00000140854CIL_0003DJ_0002ENSG00000139132ENST00000395740ENST00000427716ENST00000472289ENST00000473513ENST00000479023ENST00000493087ENST00000494275ENST00000494977ENST00000497153ENST00000525053ENST00000531134ENST00000534526ENST00000546442ENST00000550091ENST00000551984ENST00000583694ENSG00000151746ENST00000281474ENST00000395758ENST00000547680ENST00000548411ENST00000550207ENST00000551086ENST00000551848ENST00000552160ENST00000552226ENST00000614004ENSG00000207176ENST00000384447ENSG00000258134ENST00000549976ENSG00000274964ENST00000622688ENSG00000276115ENST00000614539ENSG00000277342ENST00000619744
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003DJ_0001ENSDARG00000011830ENSDART00000018144ENSDART00000125382ENSDARG00000079496ENSDART00000112671ENSDART00000140854CIL_0003DJ_0002ENSG00000139132ENST00000395740ENST00000427716ENST00000472289ENST00000493087ENST00000525053ENST00000534526ENST00000546442ENST00000551984ENSG00000151746ENST00000281474ENST00000395758ENST00000548411ENST00000550207ENST00000551848ENST00000552160ENSG00000207176ENST00000384447ENSG00000258134ENST00000549976ENSG00000274964ENST00000622688ENSG00000276115ENST00000614539ENSG00000277342ENST00000619744
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000011830 ENSDART00000018144 N/A N/A N/A 3.089±0.00 N/A N/A 5.122±3.14 2.172±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000125382 N/A N/A N/A 7.203±2.01 N/A N/A 3.994±1.19 2.090±0.42 0.237±0.00 N/A 1.818±0.00 N/A N/A N/A
ENSDART00000150041 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000079496 ENSDART00000112671 N/A N/A N/A 2.788±2.02 N/A N/A 0.017±0.00 N/A 0.013±0.00 N/A N/A N/A N/A N/A
ENSDART00000140854 N/A N/A N/A 0.522±0.00 N/A N/A N/A 0.043±0.00 N/A N/A 0.359±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000139132 ENST00000395740 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.014±0.00 N/A N/A N/A
ENST00000427716 0.998±0.00 0.247±0.00 N/A 2.855±0.13 2.336±0.41 N/A 0.784±0.16 4.724±0.00 0.281±0.00 7.853±0.00 0.952±0.82 1.898±0.87 1.332±0.12 2.349±1.58
ENST00000472289 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.279±0.00 N/A N/A N/A
ENST00000473513 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479023 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493087 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.209±0.00
ENST00000494275 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494977 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497153 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000525053 N/A N/A N/A 1.987±0.00 N/A N/A N/A 3.634±0.00 1.140±0.00 N/A N/A 3.043±0.00 N/A N/A
ENST00000531134 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000534526 N/A N/A 2.413±0.00 N/A 1.577±0.00 2.807±0.00 1.752±0.00 N/A 1.425±0.00 N/A N/A 1.136±0.00 N/A 2.589±0.00
ENST00000546442 N/A N/A N/A N/A 1.321±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000550091 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000551984 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.081±0.00 10.442±8.10
ENST00000583694 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000151746 ENST00000281474 N/A 0.847±0.00 N/A N/A 0.885±0.00 N/A 0.403±0.00 N/A N/A 0.707±0.00 N/A 3.581±0.00 0.431±0.00 0.706±0.29
ENST00000395758 0.299±0.00 N/A N/A N/A N/A N/A N/A 0.560±0.00 N/A N/A 0.355±0.00 1.822±0.00 2.883±0.00 N/A
ENST00000547680 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000548411 0.247±0.00 0.436±0.00 0.401±0.00 2.730±0.14 0.561±0.00 0.315±0.00 0.179±0.01 N/A 0.307±0.28 0.694±0.33 0.261±0.06 1.373±0.70 0.482±0.10 0.395±0.14
ENST00000550207 N/A N/A 1.374±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 2.448±0.00 N/A N/A
ENST00000551086 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000551848 N/A 1.116±0.00 N/A N/A N/A N/A N/A N/A 0.081±0.00 0.843±0.00 N/A 2.258±0.00 1.012±0.00 1.067±0.00
ENST00000552160 N/A N/A N/A N/A 1.565±0.00 1.024±0.00 N/A N/A 0.071±0.00 1.825±0.00 0.367±0.04 N/A N/A N/A
ENST00000552226 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000614004 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000207176 ENST00000384447 N/A N/A N/A 0.457±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000258134 ENST00000549976 N/A 0.364±0.00 0.696±0.00 0.097±0.00 0.302±0.00 N/A 0.078±0.00 N/A 0.514±0.00 0.544±0.00 N/A 0.180±0.09 N/A 0.133±0.03
ENSG00000274964 ENST00000622688 0.395±0.00 0.225±0.00 0.052±0.00 0.329±0.07 0.292±0.00 0.134±0.00 0.194±0.13 0.120±0.08 0.054±0.00 0.153±0.00 N/A 0.418±0.00 0.626±0.20 0.282±0.13
ENSG00000276115 ENST00000614539 0.166±0.00 0.821±0.00 0.201±0.00 0.470±0.10 0.493±0.18 0.203±0.11 0.093±0.03 0.255±0.00 0.240±0.23 0.473±0.31 N/A 0.519±0.21 0.180±0.14 0.178±0.00
ENSG00000277342 ENST00000619744 0.017±0.00 0.107±0.00 0.142±0.00 0.119±0.00 0.288±0.12 0.571±0.53 0.507±0.48 0.236±0.00 0.867±0.85 1.289±1.03 N/A 0.993±1.06 0.352±0.00 0.132±0.03

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