C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003DJ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000079496-ENSDARG00000011830 CGP 7955 18:11506755-11681537
GeneTranscriptPositionBiotype
ENSDARG00000011830 (fgd4a)
FYVE, RhoGEF and PH domain containing 4a 		ENSDART00000018144 (fgd4a-201) 11596323-11677985 protein_coding
ENSDART00000125382 (fgd4a-202) 11645361-11681537 protein_coding
ENSDART00000150041 (fgd4a-001) 11596323-11645437 protein_coding
ENSDARG00000079496 (bicd1a)
bicaudal D homolog 1a 		ENSDART00000112671 (bicd1a-201) 11506755-11566641 protein_coding
ENSDART00000140854 (bicd1a-001) 11506755-11561896 protein_coding

Danio rerio Ensembl (Zv9)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_0003DJ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000151746-ENSG00000139132 CGP 9606 12:32106835-32646050
GeneTranscriptPositionBiotype
ENSG00000139132 (FGD4)
FYVE, RhoGEF and PH domain containing 4 		ENST00000395740 (FGD4-003) 32502170-32638929 nonsense_mediated_decay
ENST00000427716 (FGD4-001) 32502160-32646050 protein_coding
ENST00000472289 (FGD4-005) 32502043-32582955 protein_coding
ENST00000473513 (FGD4-008) 32502161-32579640 processed_transcript
ENST00000479023 (FGD4-009) 32502179-32576344 processed_transcript
ENST00000493087 (FGD4-002) 32502134-32640650 nonsense_mediated_decay
ENST00000494275 (FGD4-006) 32502049-32582955 retained_intron
ENST00000494977 (FGD4-004) 32582379-32644751 nonsense_mediated_decay
ENST00000497153 (FGD4-007) 32502131-32576298 processed_transcript
ENST00000525053 (FGD4-011) 32534324-32640737 protein_coding
ENST00000531134 (FGD4-010) 32485972-32640739 protein_coding
ENST00000534526 (FGD4-013) 32399529-32640533 protein_coding
ENST00000546442 (FGD4-015) 32502184-32641519 protein_coding
ENST00000550091 (FGD4-016) 32399856-32582251 processed_transcript
ENST00000551984 (FGD4-014) 32502157-32640748 nonsense_mediated_decay
ENST00000583694 (FGD4-017) 32502217-32576448 protein_coding
ENSG00000151746 (BICD1)
bicaudal D homolog 1 (Drosophila) 		ENST00000281474 (BICD1-002) 32107229-32377877 protein_coding
ENST00000395758 (BICD1-003) 32107252-32377923 nonsense_mediated_decay
ENST00000547680 (BICD1-008) 32328402-32333065 protein_coding
ENST00000548411 (BICD1-001) 32107151-32383633 protein_coding
ENST00000550207 (BICD1-007) 32106885-32108329 protein_coding
ENST00000551086 (BICD1-006) 32107296-32108806 protein_coding
ENST00000551848 (BICD1-005) 32106835-32108796 protein_coding
ENST00000552160 (BICD1-004) 32334517-32338930 protein_coding
ENST00000552226 (BICD1-009) 32337499-32339120 retained_intron
ENST00000614004 (BICD1-010) 32367534-32368062 retained_intron
ENSG00000207176 (Y_RNA)
Y RNA 		ENST00000384447 (Y_RNA.1-699) 32396050-32396147 misc_RNA
ENSG00000258134 (RP11-956A19.1)
 ENST00000549976 (RP11-956A19.1-001) 32227410-32228154 processed_pseudogene
ENSG00000274964 (RP11-817I4.1)
 ENST00000622688 (RP11-817I4.1-001) 32339368-32340724 sense_intronic
ENSG00000276115 (RP11-817I4.2)
 ENST00000614539 (RP11-817I4.2-001) 32352349-32354144 sense_intronic
ENSG00000277342 (RP11-843B15.4)
 ENST00000619744 (RP11-843B15.4-001) 32109076-32109602 sense_intronic

Homo sapiens Ensembl (GRCh38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003DJ_0001ENSDARG00000011830ENSDART00000018144ENSDART00000125382ENSDART00000150041ENSDARG00000079496ENSDART00000112671ENSDART00000140854CIL_0003DJ_0002ENSG00000139132ENST00000395740ENST00000427716ENST00000472289ENST00000473513ENST00000479023ENST00000493087ENST00000494275ENST00000494977ENST00000497153ENST00000525053ENST00000531134ENST00000534526ENST00000546442ENST00000550091ENST00000551984ENST00000583694ENSG00000151746ENST00000281474ENST00000395758ENST00000547680ENST00000548411ENST00000550207ENST00000551086ENST00000551848ENST00000552160ENST00000552226ENST00000614004ENSG00000207176ENST00000384447ENSG00000258134ENST00000549976ENSG00000274964ENST00000622688ENSG00000276115ENST00000614539ENSG00000277342ENST00000619744
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003DJ_0001ENSDARG00000011830ENSDART00000018144ENSDART00000125382ENSDARG00000079496ENSDART00000112671ENSDART00000140854CIL_0003DJ_0002ENSG00000139132ENST00000395740ENST00000427716ENST00000472289ENST00000493087ENST00000525053ENST00000534526ENST00000546442ENST00000551984ENSG00000151746ENST00000281474ENST00000395758ENST00000548411ENST00000550207ENST00000551848ENST00000552160ENSG00000207176ENST00000384447ENSG00000258134ENST00000549976ENSG00000274964ENST00000622688ENSG00000276115ENST00000614539ENSG00000277342ENST00000619744
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000011830 ENSDART00000018144 N/A N/A N/A 3.089±0.00 N/A N/A 5.122±3.14 2.172±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000125382 N/A N/A N/A 7.203±2.01 N/A N/A 3.994±1.19 2.090±0.42 0.237±0.00 N/A 1.818±0.00 N/A N/A N/A
ENSDART00000150041 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000079496 ENSDART00000112671 N/A N/A N/A 2.788±2.02 N/A N/A 0.017±0.00 N/A 0.013±0.00 N/A N/A N/A N/A N/A
ENSDART00000140854 N/A N/A N/A 0.522±0.00 N/A N/A N/A 0.043±0.00 N/A N/A 0.359±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000139132 ENST00000395740 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.014±0.00 N/A N/A N/A
ENST00000427716 0.998±0.00 0.247±0.00 N/A 2.855±0.13 2.336±0.41 N/A 0.784±0.16 4.724±0.00 0.281±0.00 7.853±0.00 0.952±0.82 1.898±0.87 1.332±0.12 2.349±1.58
ENST00000472289 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.279±0.00 N/A N/A N/A
ENST00000473513 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479023 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493087 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.209±0.00
ENST00000494275 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494977 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497153 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000525053 N/A N/A N/A 1.987±0.00 N/A N/A N/A 3.634±0.00 1.140±0.00 N/A N/A 3.043±0.00 N/A N/A
ENST00000531134 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000534526 N/A N/A 2.413±0.00 N/A 1.577±0.00 2.807±0.00 1.752±0.00 N/A 1.425±0.00 N/A N/A 1.136±0.00 N/A 2.589±0.00
ENST00000546442 N/A N/A N/A N/A 1.321±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000550091 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000551984 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.081±0.00 10.442±8.10
ENST00000583694 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000151746 ENST00000281474 N/A 0.847±0.00 N/A N/A 0.885±0.00 N/A 0.403±0.00 N/A N/A 0.707±0.00 N/A 3.581±0.00 0.431±0.00 0.706±0.29
ENST00000395758 0.299±0.00 N/A N/A N/A N/A N/A N/A 0.560±0.00 N/A N/A 0.355±0.00 1.822±0.00 2.883±0.00 N/A
ENST00000547680 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000548411 0.247±0.00 0.436±0.00 0.401±0.00 2.730±0.14 0.561±0.00 0.315±0.00 0.179±0.01 N/A 0.307±0.28 0.694±0.33 0.261±0.06 1.373±0.70 0.482±0.10 0.395±0.14
ENST00000550207 N/A N/A 1.374±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 2.448±0.00 N/A N/A
ENST00000551086 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000551848 N/A 1.116±0.00 N/A N/A N/A N/A N/A N/A 0.081±0.00 0.843±0.00 N/A 2.258±0.00 1.012±0.00 1.067±0.00
ENST00000552160 N/A N/A N/A N/A 1.565±0.00 1.024±0.00 N/A N/A 0.071±0.00 1.825±0.00 0.367±0.04 N/A N/A N/A
ENST00000552226 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000614004 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000207176 ENST00000384447 N/A N/A N/A 0.457±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000258134 ENST00000549976 N/A 0.364±0.00 0.696±0.00 0.097±0.00 0.302±0.00 N/A 0.078±0.00 N/A 0.514±0.00 0.544±0.00 N/A 0.180±0.09 N/A 0.133±0.03
ENSG00000274964 ENST00000622688 0.395±0.00 0.225±0.00 0.052±0.00 0.329±0.07 0.292±0.00 0.134±0.00 0.194±0.13 0.120±0.08 0.054±0.00 0.153±0.00 N/A 0.418±0.00 0.626±0.20 0.282±0.13
ENSG00000276115 ENST00000614539 0.166±0.00 0.821±0.00 0.201±0.00 0.470±0.10 0.493±0.18 0.203±0.11 0.093±0.03 0.255±0.00 0.240±0.23 0.473±0.31 N/A 0.519±0.21 0.180±0.14 0.178±0.00
ENSG00000277342 ENST00000619744 0.017±0.00 0.107±0.00 0.142±0.00 0.119±0.00 0.288±0.12 0.571±0.53 0.507±0.48 0.236±0.00 0.867±0.85 1.289±1.03 N/A 0.993±1.06 0.352±0.00 0.132±0.03

Loading