C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003EW_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000177830-ENSG00000183020 CGP 9606 11:867860-1012245
GeneTranscriptPositionBiotype
ENSG00000177830 (CHID1)
chitinase domain containing 1 		ENST00000323578 (CHID1-001) 868396-911461 protein_coding
ENST00000429789 (CHID1-003) 869762-910835 protein_coding
ENST00000436108 (CHID1-004) 869767-910831 protein_coding
ENST00000449825 (CHID1-201) 867860-915058 protein_coding
ENST00000454838 (CHID1-202) 867860-904816 protein_coding
ENST00000524538 (CHID1-014) 869780-870751 retained_intron
ENST00000524832 (CHID1-012) 882328-902322 processed_transcript
ENST00000525225 (CHID1-011) 902971-910816 protein_coding
ENST00000525840 (CHID1-008) 904701-914801 protein_coding
ENST00000526714 (CHID1-020) 870419-904864 processed_transcript
ENST00000528154 (CHID1-007) 904737-914774 protein_coding
ENST00000528426 (CHID1-010) 899353-910791 nonsense_mediated_decay
ENST00000528521 (CHID1-017) 870122-884163 nonsense_mediated_decay
ENST00000528534 (CHID1-013) 874722-883279 processed_transcript
ENST00000528581 (CHID1-002) 869763-910810 protein_coding
ENST00000529539 (CHID1-024) 868395-883249 protein_coding
ENST00000530939 (CHID1-009) 902245-910821 protein_coding
ENST00000531010 (CHID1-016) 882980-884151 retained_intron
ENST00000531859 (CHID1-015) 883146-908659 protein_coding
ENST00000532909 (CHID1-021) 868395-870486 nonsense_mediated_decay
ENST00000533056 (CHID1-005) 902197-915058 protein_coding
ENST00000533059 (CHID1-006) 902235-914820 protein_coding
ENST00000534207 (CHID1-023) 868399-883178 nonsense_mediated_decay
ENST00000534254 (CHID1-018) 884068-908664 nonsense_mediated_decay
ENSG00000183020 (AP2A2)
adaptor-related protein complex 2, alpha 2 subunit 		ENST00000332231 (AP2A2-201) 925809-1012245 protein_coding
ENST00000448903 (AP2A2-001) 925881-1012239 protein_coding
ENST00000524559 (AP2A2-019) 946461-977120 protein_coding
ENST00000524952 (AP2A2-014) 985538-988827 retained_intron
ENST00000525796 (AP2A2-023) 925872-985477 protein_coding
ENST00000525891 (AP2A2-012) 996064-1009216 processed_transcript
ENST00000526376 (AP2A2-010) 1003732-1007040 retained_intron
ENST00000526401 (AP2A2-025) 1003667-1009774 retained_intron
ENST00000526753 (AP2A2-016) 942279-972197 protein_coding
ENST00000527024 (AP2A2-020) 940735-972216 protein_coding
ENST00000527917 (AP2A2-015) 985384-986846 retained_intron
ENST00000528195 (AP2A2-013) 925945-1000483 processed_transcript
ENST00000528815 (AP2A2-002) 925900-1010919 nonsense_mediated_decay
ENST00000528816 (AP2A2-009) 1009355-1010237 retained_intron
ENST00000529427 (AP2A2-011) 1006544-1008282 retained_intron
ENST00000529438 (AP2A2-024) 1001326-1009366 processed_transcript
ENST00000529818 (AP2A2-021) 924894-977193 processed_transcript
ENST00000529858 (AP2A2-008) 925870-970233 processed_transcript
ENST00000530801 (AP2A2-022) 943100-972191 protein_coding
ENST00000531497 (AP2A2-005) 1006709-1010926 retained_intron
ENST00000531548 (AP2A2-017) 932693-977157 protein_coding
ENST00000534328 (AP2A2-004) 925880-1010919 protein_coding
ENST00000534485 (AP2A2-018) 933561-977207 protein_coding
ENSG00000222561 (RNU6-1025P)
RNA, U6 small nuclear 1025, pseudogene 		ENST00000410629 (RNU6-1025P-201) 948421-948524 snRNA
ENSG00000264671 (AP006477.1)
 ENST00000584406 (AP006477.1-201) 951295-951364 miRNA

Homo sapiens Ensembl (GRCh38)

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CIL_0003EW_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000025512-ENSMUSG00000002957 CGP 10090 7:141493136-141633011
GeneTranscriptPositionBiotype
ENSMUSG00000002957 (Ap2a2)
adaptor-related protein complex 2, alpha 2 subunit 		ENSMUST00000003038 (Ap2a2-201) 141562180-141633011 protein_coding
ENSMUSG00000025511 (Tspan4)
tetraspanin 4 		ENSMUST00000026585 (Tspan4-001) 141475240-141493427 protein_coding
ENSMUST00000117634 (Tspan4-002) 141476400-141493421 protein_coding
ENSMUST00000130402 (Tspan4-006) 141491489-141492960 retained_intron
ENSMUST00000138092 (Tspan4-003) 141475510-141491803 protein_coding
ENSMUST00000140858 (Tspan4-005) 141475736-141489620 protein_coding
ENSMUST00000146305 (Tspan4-004) 141475513-141491816 protein_coding
ENSMUSG00000097170 (Gm16982)
predicted gene, 16982 		ENSMUST00000181275 (Gm16982-201) 141610066-141613747 lincRNA
ENSMUSG00000098759 (Mir7063)
microRNA 7063 		ENSMUST00000184158 (Mir7063-201) 141620701-141620791 miRNA

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003EW_0001ENSG00000177830ENST00000323578ENST00000429789ENST00000436108ENST00000449825ENST00000454838ENST00000524538ENST00000524832ENST00000525225ENST00000525840ENST00000526714ENST00000528154ENST00000528426ENST00000528521ENST00000528534ENST00000528581ENST00000529539ENST00000530939ENST00000531010ENST00000531859ENST00000532909ENST00000533056ENST00000533059ENST00000534207ENST00000534254ENSG00000183020ENST00000332231ENST00000448903ENST00000524559ENST00000524952ENST00000525796ENST00000525891ENST00000526376ENST00000526401ENST00000526753ENST00000527024ENST00000527917ENST00000528195ENST00000528815ENST00000528816ENST00000529427ENST00000529438ENST00000529818ENST00000529858ENST00000530801ENST00000531497ENST00000531548ENST00000534328ENST00000534485ENSG00000222561ENST00000410629ENSG00000264671ENST00000584406CIL_0003EW_0002ENSMUSG00000002957ENSMUST00000003038ENSMUSG00000025511ENSMUST00000026585ENSMUST00000117634ENSMUST00000130402ENSMUST00000138092ENSMUST00000140858ENSMUST00000146305ENSMUSG00000097170ENSMUST00000181275ENSMUSG00000098759ENSMUST00000184158
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003EW_0001ENSG00000177830ENST00000323578ENST00000429789ENST00000436108ENST00000454838ENST00000524832ENST00000526714ENST00000528426ENST00000528581ENST00000529539ENST00000530939ENST00000533059ENST00000534207ENSG00000183020ENST00000332231ENST00000448903ENST00000528815ENST00000531497ENST00000534328ENST00000534485ENSG00000222561ENST00000410629ENSG00000264671ENST00000584406CIL_0003EW_0002ENSMUSG00000002957ENSMUST00000003038ENSMUSG00000025511ENSMUST00000026585ENSMUST00000117634ENSMUST00000138092ENSMUSG00000097170ENSMUST00000181275ENSMUSG00000098759ENSMUST00000184158
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000177830 ENST00000323578 N/A 3.918±0.00 0.214±0.00 N/A N/A 2.371±0.00 N/A 4.192±0.00 N/A N/A N/A 5.382±0.00 N/A N/A
ENST00000429789 N/A 8.368±0.00 N/A 3.847±2.52 6.633±0.00 4.697±4.11 6.638±0.00 N/A 9.056±0.00 8.653±0.00 4.783±3.56 7.834±6.02 18.180±1.09 12.338±0.00
ENST00000436108 9.113±0.00 8.026±0.00 1.769±0.00 6.044±4.28 6.776±4.98 4.599±3.92 1.962±1.24 12.419±9.10 7.982±6.99 7.454±4.74 2.934±0.00 50.478±9.05 50.035±1.61 17.473±7.54
ENST00000449825 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000454838 N/A N/A N/A N/A N/A N/A N/A N/A 0.195±0.00 N/A N/A N/A N/A N/A
ENST00000524538 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000524832 7.104±0.00 N/A N/A N/A 2.244±0.00 N/A N/A N/A N/A N/A N/A 56.016±0.00 38.420±0.00 34.092±0.00
ENST00000525225 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000525840 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000526714 N/A N/A 0.697±0.00 3.627±2.08 14.118±0.00 N/A 5.070±0.00 3.690±0.00 15.780±0.00 9.303±0.00 2.283±0.00 N/A 12.712±0.00 17.138±0.00
ENST00000528154 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000528426 N/A N/A 0.840±0.00 N/A 2.039±0.00 N/A 0.606±0.00 N/A N/A N/A N/A 10.009±8.51 N/A 17.981±0.00
ENST00000528521 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000528534 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000528581 9.004±0.00 11.499±0.00 N/A 4.783±0.00 10.728±0.00 4.405±0.00 N/A 8.696±0.00 N/A N/A 4.822±0.00 12.481±0.00 20.859±0.00 19.947±4.99
ENST00000529539 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.060±0.00 N/A N/A N/A
ENST00000530939 N/A N/A N/A N/A N/A N/A N/A N/A 2.825±0.00 N/A 1.834±0.00 N/A N/A N/A
ENST00000531010 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000531859 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000532909 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000533056 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000533059 N/A N/A N/A N/A N/A N/A 0.538±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000534207 N/A N/A N/A N/A N/A 0.832±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000534254 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000183020 ENST00000332231 N/A N/A N/A 3.865±0.00 1.891±1.18 2.624±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000448903 5.835±0.00 6.945±0.00 2.040±0.00 13.008±0.00 6.987±0.00 5.016±3.00 1.969±1.53 8.420±5.15 2.987±1.64 0.721±0.00 2.497±1.75 9.240±5.68 11.528±0.00 11.162±0.02
ENST00000524559 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000524952 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000525796 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000525891 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000526376 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000526401 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000526753 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000527024 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000527917 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000528195 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000528815 15.656±0.00 7.320±0.00 2.088±0.00 6.597±1.98 6.285±3.62 4.196±0.75 3.666±2.71 9.475±6.23 5.574±3.24 6.061±3.94 8.063±0.00 13.526±8.57 19.625±2.07 24.521±7.01
ENST00000528816 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000529427 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000529438 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000529818 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000529858 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000530801 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000531497 N/A 2.031±0.00 N/A N/A 1.089±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000531548 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000534328 N/A N/A N/A N/A N/A 3.731±0.00 0.795±0.00 N/A N/A N/A N/A N/A 10.761±0.00 13.899±0.00
ENST00000534485 N/A N/A N/A N/A N/A N/A N/A 10.803±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000222561 ENST00000410629 N/A 0.586±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000264671 ENST00000584406 N/A 0.470±0.00 N/A N/A 0.469±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000002957 ENSMUST00000003038 31.643±2.22 20.525±2.77 9.604±2.15 28.301±11.56 21.612±10.12 22.218±2.43 10.518±2.38 41.855±3.51 18.136±3.87 27.867±0.58 11.045±1.02 20.766±3.29 38.087±13.19 4.059±1.91
ENSMUSG00000025511 ENSMUST00000026585 33.124±3.78 71.574±6.17 26.200±0.00 5.138±0.50 38.640±6.90 7.180±0.86 8.638±2.03 24.359±4.67 22.760±3.99 24.598±11.80 1.979±0.11 114.336±42.70 26.356±0.01 N/A
ENSMUST00000117634 35.927±13.47 48.776±12.06 33.035±2.82 9.282±2.94 28.280±11.15 10.258±1.27 16.826±3.77 31.385±6.12 14.804±2.08 30.798±11.01 4.507±1.48 46.530±18.74 N/A N/A
ENSMUST00000130402 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138092 N/A 79.802±17.22 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140858 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146305 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000097170 ENSMUST00000181275 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.486±2.79
ENSMUSG00000098759 ENSMUST00000184158 9307.420±0.00 N/A N/A N/A N/A N/A N/A N/A 5475.750±0.00 N/A N/A N/A N/A N/A

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