C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003F4_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000104313-ENSG00000178860 CGP 9606 8:71197433-71844468
GeneTranscriptPositionBiotype
ENSG00000104313 (EYA1)
EYA transcriptional coactivator and phosphatase 1 		ENST00000303824 (EYA1-010) 71197439-71361860 protein_coding
ENST00000340726 (EYA1-001) 71197433-71362232 protein_coding
ENST00000388740 (EYA1-201) 71197435-71356689 protein_coding
ENST00000388741 (EYA1-012) 71198128-71362136 protein_coding
ENST00000388742 (EYA1-002) 71197433-71356678 protein_coding
ENST00000388743 (EYA1-011) 71199069-71356609 protein_coding
ENST00000419131 (EYA1-005) 71199320-71356486 protein_coding
ENST00000422295 (EYA1-007) 71317659-71322461 retained_intron
ENST00000465115 (EYA1-003) 71197433-71361731 nonsense_mediated_decay
ENST00000493349 (EYA1-008) 71215495-71299108 nonsense_mediated_decay
ENST00000496494 (EYA1-004) 71199241-71356633 retained_intron
ENSG00000178860 (MSC)
musculin 		ENST00000325509 (MSC-001) 71841549-71844468 protein_coding
ENST00000518440 (MSC-002) 71842349-71842992 processed_transcript
ENST00000521739 (MSC-003) 71842420-71843413 processed_transcript
ENSG00000235531 (RP11-383H13.1)
 ENST00000457356 (RP11-383H13.1-003) 71844103-72056312 antisense
ENST00000512290 (RP11-383H13.1-010) 72029726-72053322 antisense
ENST00000518700 (RP11-383H13.1-005) 71961934-71966779 antisense
ENST00000518916 (RP11-383H13.1-011) 71844158-72118393 antisense
ENST00000519068 (RP11-383H13.1-007) 71962922-72062292 antisense
ENST00000519751 (RP11-383H13.1-008) 71844144-72052607 antisense
ENST00000521467 (RP11-383H13.1-006) 71828167-72002405 antisense
ENST00000522519 (RP11-383H13.1-001) 71843123-72053047 antisense
ENST00000523133 (RP11-383H13.1-009) 71970666-72002394 antisense
ENST00000524152 (RP11-383H13.1-004) 71843561-72052713 antisense
ENSG00000253124 (TRAPPC2P2)
trafficking protein particle complex 2 pseudogene 2 		ENST00000517589 (TRAPPC2P2-001) 71448811-71449219 processed_pseudogene
ENSG00000253287 (RP11-281N10.1)
 ENST00000517848 (RP11-281N10.1-001) 71779605-71792875 lincRNA
ENSG00000253379 (RP11-1102P16.1)
 ENST00000518177 (RP11-1102P16.1-003) 71530872-71592025 lincRNA
ENST00000519927 (RP11-1102P16.1-002) 71529407-71548187 lincRNA
ENST00000521794 (RP11-1102P16.1-004) 71568173-71585200 lincRNA
ENST00000523327 (RP11-1102P16.1-005) 71549989-71568767 lincRNA
ENST00000523987 (RP11-1102P16.1-001) 71403440-71547657 lincRNA
ENSG00000254277 (RP11-1144P22.1)
 ENST00000519840 (RP11-1144P22.1-002) 71675300-71702786 lincRNA
ENST00000521131 (RP11-1144P22.1-001) 71675377-71702435 lincRNA
CIL_0003F4_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000025932-ENSMUSG00000025930 CGP 10090 1:14168954-14755992
GeneTranscriptPositionBiotype
ENSMUSG00000025930 (Msc)
musculin 		ENSMUST00000027062 (Msc-001) 14753346-14755990 protein_coding
ENSMUST00000188982 (Msc-004) 14753935-14754665 retained_intron
ENSMUST00000190471 (Msc-002) 14754767-14755992 retained_intron
ENSMUST00000190719 (Msc-003) 14753746-14755353 protein_coding
ENSMUSG00000025932 (Eya1)
eyes absent 1 homolog (Drosophila) 		ENSMUST00000027066 (Eya1-201) 14168954-14310200 protein_coding
ENSMUST00000080664 (Eya1-002) 14169666-14310119 protein_coding
ENSMUST00000168081 (Eya1-001) 14168958-14310235 protein_coding
ENSMUST00000185329 (Eya1-003) 14301204-14310051 retained_intron
ENSMUST00000185453 (Eya1-006) 14270707-14304628 protein_coding
ENSMUST00000187790 (Eya1-005) 14270775-14309836 protein_coding
ENSMUST00000188857 (Eya1-007) 14252600-14304619 protein_coding
ENSMUST00000189526 (Eya1-008) 14207926-14231492 protein_coding
ENSMUST00000190337 (Eya1-004) 14170643-14304570 protein_coding
ENSMUSG00000054493 (Gm9947)
predicted gene 9947 		ENSMUST00000067599 (Gm9947-001) 14755454-14758373 antisense
ENSMUST00000187401 (Gm9947-002) 14752937-14776931 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003F4_0001ENSG00000104313ENST00000303824ENST00000340726ENST00000388740ENST00000388741ENST00000388742ENST00000388743ENST00000419131ENST00000422295ENST00000465115ENST00000493349ENST00000496494ENSG00000178860ENST00000325509ENST00000518440ENST00000521739ENSG00000235531ENST00000457356ENST00000512290ENST00000518700ENST00000518916ENST00000519068ENST00000519751ENST00000521467ENST00000522519ENST00000523133ENST00000524152ENSG00000253124ENST00000517589ENSG00000253287ENST00000517848ENSG00000253379ENST00000518177ENST00000519927ENST00000521794ENST00000523327ENST00000523987ENSG00000254277ENST00000519840ENST00000521131CIL_0003F4_0002ENSMUSG00000025930ENSMUST00000027062ENSMUST00000188982ENSMUST00000190471ENSMUST00000190719ENSMUSG00000025932ENSMUST00000027066ENSMUST00000080664ENSMUST00000168081ENSMUST00000185329ENSMUST00000185453ENSMUST00000187790ENSMUST00000188857ENSMUST00000189526ENSMUST00000190337ENSMUSG00000054493ENSMUST00000067599ENSMUST00000187401
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003F4_0001ENSG00000104313ENST00000303824ENST00000388740ENST00000388741ENST00000388742ENST00000388743ENST00000419131ENST00000422295ENST00000465115ENST00000493349ENST00000496494ENSG00000178860ENST00000325509ENSG00000235531ENST00000457356ENST00000512290ENST00000523133ENSG00000253124ENST00000517589ENSG00000253287ENST00000517848ENSG00000253379ENST00000518177ENST00000519927ENST00000521794ENST00000523327ENST00000523987ENSG00000254277ENST00000519840ENST00000521131CIL_0003F4_0002ENSMUSG00000025930ENSMUST00000027062ENSMUST00000188982ENSMUST00000190471ENSMUST00000190719ENSMUSG00000025932ENSMUST00000027066ENSMUST00000080664ENSMUST00000168081ENSMUST00000185329ENSMUST00000185453ENSMUST00000187790ENSMUST00000188857ENSMUST00000189526ENSMUST00000190337ENSMUSG00000054493ENSMUST00000067599ENSMUST00000187401
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000104313 ENST00000303824 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.124±0.00
ENST00000340726 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000388740 N/A N/A N/A 0.348±0.00 0.096±0.00 N/A N/A N/A N/A N/A N/A N/A 0.047±0.00 N/A
ENST00000388741 0.031±0.00 N/A N/A N/A 0.116±0.00 0.031±0.00 N/A 0.050±0.00 0.649±0.00 0.329±0.00 N/A 0.022±0.00 N/A 0.243±0.00
ENST00000388742 N/A N/A N/A 0.232±0.00 N/A N/A 1.960±0.00 N/A N/A N/A N/A 0.102±0.00 N/A N/A
ENST00000388743 N/A N/A N/A 0.410±0.10 N/A 0.140±0.12 0.998±0.09 N/A 0.411±0.39 N/A 0.470±0.00 0.103±0.00 0.018±0.00 0.754±0.00
ENST00000419131 N/A N/A N/A 1.156±0.00 N/A 0.087±0.00 0.813±0.00 N/A 1.715±0.00 0.299±0.11 N/A N/A 0.039±0.02 N/A
ENST00000422295 N/A N/A 1.754±0.00 N/A N/A 1.043±0.00 N/A N/A N/A N/A N/A N/A 0.218±0.00 N/A
ENST00000465115 N/A N/A N/A 0.362±0.00 0.265±0.00 N/A N/A N/A N/A 0.379±0.00 0.617±0.31 N/A 0.012±0.00 0.290±0.00
ENST00000493349 0.110±0.00 0.017±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496494 N/A N/A N/A N/A N/A N/A 0.531±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000178860 ENST00000325509 9.146±0.00 20.313±0.00 N/A 2.858±1.97 10.484±8.39 2.892±0.00 1.839±0.60 3.011±0.00 0.331±0.00 8.971±0.00 0.661±0.19 10.741±6.67 15.582±3.81 10.240±6.74
ENST00000518440 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521739 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000235531 ENST00000457356 N/A N/A N/A N/A 0.808±0.00 0.622±0.00 0.196±0.00 N/A N/A 0.403±0.00 0.069±0.00 N/A N/A 0.650±0.30
ENST00000512290 N/A N/A N/A 2.586±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 3.115±0.00 2.261±0.00
ENST00000518700 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000518916 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519068 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519751 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521467 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522519 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523133 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.973±0.00 1.326±0.00 N/A N/A N/A
ENST00000524152 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000253124 ENST00000517589 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.151±0.00
ENSG00000253287 ENST00000517848 0.014±0.00 0.130±0.00 N/A 0.084±0.00 0.081±0.00 0.229±0.00 N/A 0.014±0.00 N/A 0.120±0.00 N/A N/A N/A 0.169±0.15
ENSG00000253379 ENST00000518177 N/A N/A N/A 0.109±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519927 N/A N/A N/A 0.027±0.00 N/A N/A 0.020±0.00 N/A 0.204±0.00 0.129±0.00 N/A 0.030±0.00 N/A 0.171±0.14
ENST00000521794 N/A 0.092±0.00 N/A N/A N/A N/A N/A 0.013±0.00 0.108±0.10 N/A N/A N/A N/A N/A
ENST00000523327 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.130±0.00 N/A N/A N/A 1.869±0.00
ENST00000523987 0.071±0.00 0.080±0.00 N/A 0.157±0.00 0.011±0.00 0.005±0.00 0.017±0.00 N/A 0.090±0.07 0.147±0.04 0.005±0.00 0.059±0.03 N/A N/A
ENSG00000254277 ENST00000519840 0.028±0.00 0.026±0.00 N/A 0.029±0.00 0.012±0.00 N/A N/A 0.076±0.00 N/A N/A N/A N/A N/A 0.042±0.03
ENST00000521131 0.043±0.00 N/A N/A 0.066±0.00 N/A 0.153±0.00 0.044±0.00 N/A N/A N/A 0.146±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025930 ENSMUST00000027062 2.258±0.73 0.107±0.04 0.380±0.08 0.491±0.07 6.318±1.20 0.709±0.13 1.353±0.57 0.195±0.14 0.270±0.16 0.829±0.10 0.532±0.21 0.972±0.37 0.323±0.15 0.085±0.01
ENSMUST00000188982 N/A N/A N/A N/A N/A N/A N/A N/A 0.105±0.01 N/A 0.315±0.07 0.528±0.15 0.380±0.21 0.066±0.00
ENSMUST00000190471 1.016±0.35 0.079±0.04 0.389±0.00 0.175±0.00 3.885±0.90 0.624±0.14 0.556±0.00 0.112±0.07 0.173±0.11 0.513±0.09 0.194±0.09 0.749±0.31 0.171±0.04 0.097±0.04
ENSMUST00000190719 N/A N/A N/A 1.078±0.00 N/A N/A N/A 0.211±0.10 N/A N/A 0.278±0.08 0.738±0.15 0.247±0.00 0.140±0.04
ENSMUSG00000025932 ENSMUST00000027066 0.106±0.00 0.294±0.00 0.375±0.09 0.196±0.06 0.217±0.02 0.235±0.15 N/A 0.078±0.02 0.008±0.01 0.293±0.07 N/A 0.202±0.09 0.015±0.00 N/A
ENSMUST00000080664 0.176±0.07 0.279±0.08 N/A 0.316±0.04 0.144±0.09 0.070±0.02 0.124±0.00 0.038±0.00 0.010±0.00 N/A N/A 0.139±0.06 0.017±0.00 0.144±0.00
ENSMUST00000168081 0.103±0.03 0.708±0.19 0.150±0.00 N/A 0.071±0.00 0.201±0.00 0.139±0.06 N/A 0.003±0.00 N/A 1.057±0.00 0.238±0.09 0.033±0.00 0.118±0.00
ENSMUST00000185329 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.188±0.00 N/A N/A
ENSMUST00000185453 N/A N/A N/A N/A N/A 0.115±0.03 N/A 0.267±0.11 0.024±0.00 N/A N/A N/A N/A N/A
ENSMUST00000187790 0.550±0.00 N/A N/A N/A N/A N/A N/A N/A 0.017±0.00 N/A N/A N/A N/A N/A
ENSMUST00000188857 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.793±0.00 N/A N/A
ENSMUST00000189526 N/A N/A N/A N/A N/A N/A N/A N/A 0.045±0.00 N/A N/A N/A 0.629±0.00 N/A
ENSMUST00000190337 0.317±0.05 0.626±0.15 N/A 0.581±0.25 0.499±0.18 0.176±0.08 0.167±0.05 0.127±0.06 0.004±0.00 0.563±0.12 2.088±0.00 0.559±0.38 0.099±0.02 0.344±0.15
ENSMUSG00000054493 ENSMUST00000067599 N/A N/A 0.099±0.00 N/A N/A N/A N/A N/A 0.047±0.02 N/A 0.093±0.00 N/A N/A 0.019±0.01
ENSMUST00000187401 N/A N/A N/A N/A N/A N/A N/A 0.068±0.00 N/A N/A N/A 0.380±0.00 0.255±0.09 N/A

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