C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003G8_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000196683-ENSG00000122591 CGP 9606 7:22812628-23014130
GeneTranscriptPositionBiotype
ENSG00000122591 (FAM126A)
family with sequence similarity 126, member A 		ENST00000409763 (FAM126A-008) 22978164-23014074 protein_coding
ENST00000409923 (FAM126A-006) 22944509-23014084 protein_coding
ENST00000421730 (FAM126A-009) 22889371-22941190 processed_transcript
ENST00000432176 (FAM126A-001) 22934211-23014129 protein_coding
ENST00000440481 (FAM126A-002) 22941269-23014130 protein_coding
ENST00000465661 (FAM126A-003) 22983994-23014130 processed_transcript
ENST00000467005 (FAM126A-005) 22983750-23014091 retained_intron
ENST00000477349 (FAM126A-004) 22976769-23014088 processed_transcript
ENST00000498833 (FAM126A-007) 22945983-22961316 processed_transcript
ENSG00000196683 (TOMM7)
translocase of outer mitochondrial membrane 7 homolog (yeast) 		ENST00000358435 (TOMM7-001) 22812632-22822851 protein_coding
ENST00000372879 (TOMM7-004) 22812973-22822791 protein_coding
ENST00000405021 (TOMM7-005) 22812971-22822344 protein_coding
ENST00000463284 (TOMM7-002) 22812628-22822849 processed_transcript
ENST00000483581 (TOMM7-006) 22812971-22818335 retained_intron
ENST00000496129 (TOMM7-003) 22817663-22822810 retained_intron
ENST00000621567 (TOMM7-201) 22817340-22822852 protein_coding
ENSG00000221740 (SNORD93)
small nucleolar RNA, C/D box 93 		ENST00000408813 (SNORD93-201) 22856613-22856686 snoRNA
ENSG00000226279 (AC005682.7)
 ENST00000413498 (AC005682.7-001) 22881893-22882390 processed_pseudogene
ENSG00000226329 (AC005682.6)
 ENST00000452069 (AC005682.6-001) 22863874-22881350 unprocessed_pseudogene
ENSG00000228649 (AC005682.5)
 ENST00000415611 (AC005682.5-001) 22854178-22859487 lincRNA
ENST00000422542 (AC005682.5-002) 22856528-22861402 lincRNA
ENST00000432668 (AC005682.5-003) 22856086-22857075 retained_intron

Homo sapiens Ensembl (GRCh38)

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Structures from Ensembl
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CIL_0003G8_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000028998-ENSMUSG00000028995 CGP 10090 5:23838944-24030690
GeneTranscriptPositionBiotype
ENSMUSG00000028995 (Fam126a)
family with sequence similarity 126, member A 		ENSMUST00000030849 (Fam126a-001) 23960931-24030690 protein_coding
ENSMUST00000101513 (Fam126a-002) 23915277-24030312 protein_coding
ENSMUST00000115109 (Fam126a-004) 23964481-24000019 protein_coding
ENSMUST00000126828 (Fam126a-005) 23915276-23922904 processed_transcript
ENSMUST00000147179 (Fam126a-003) 23988850-24030305 processed_transcript
ENSMUSG00000028998 (Tomm7)
translocase of outer mitochondrial membrane 7 homolog (yeast) 		ENSMUST00000030851 (Tomm7-001) 23838944-23844161 protein_coding
ENSMUSG00000097180 (2700038G22Rik)
RIKEN cDNA 2700038G22 gene 		ENSMUST00000181574 (2700038G22Rik-201) 23850597-23854924 lincRNA

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003G8_0001ENSG00000122591ENST00000409763ENST00000409923ENST00000421730ENST00000432176ENST00000440481ENST00000465661ENST00000467005ENST00000477349ENST00000498833ENSG00000196683ENST00000358435ENST00000372879ENST00000405021ENST00000463284ENST00000483581ENST00000496129ENST00000621567ENSG00000221740ENST00000408813ENSG00000226279ENST00000413498ENSG00000226329ENST00000452069ENSG00000228649ENST00000415611ENST00000422542ENST00000432668CIL_0003G8_0002ENSMUSG00000028995ENSMUST00000030849ENSMUST00000101513ENSMUST00000115109ENSMUST00000126828ENSMUST00000147179ENSMUSG00000028998ENSMUST00000030851ENSMUSG00000097180ENSMUST00000181574
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003G8_0001ENSG00000122591ENST00000409763ENST00000409923ENST00000432176ENST00000440481ENST00000498833ENSG00000196683ENST00000358435ENST00000372879ENST00000405021ENST00000621567ENSG00000221740ENST00000408813ENSG00000226279ENST00000413498ENSG00000226329ENST00000452069ENSG00000228649ENST00000415611ENST00000422542ENST00000432668CIL_0003G8_0002ENSMUSG00000028995ENSMUST00000030849ENSMUST00000101513ENSMUST00000115109ENSMUSG00000028998ENSMUST00000030851ENSMUSG00000097180ENSMUST00000181574
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000122591 ENST00000409763 N/A N/A 3.210±0.00 N/A N/A 4.593±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000409923 1.976±0.00 N/A N/A 0.571±0.00 2.815±0.00 0.727±0.00 1.262±0.14 0.551±0.00 3.723±0.00 3.398±0.00 N/A 0.814±0.25 1.829±1.19 4.394±0.00
ENST00000421730 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000432176 N/A 0.391±0.00 N/A 0.226±0.00 0.366±0.00 0.407±0.00 N/A 0.238±0.05 0.506±0.00 0.618±0.00 N/A 0.202±0.09 N/A N/A
ENST00000440481 4.071±0.00 2.518±0.00 0.809±0.00 2.509±0.00 2.520±0.81 2.837±2.08 1.442±0.61 1.268±0.13 1.752±0.77 3.482±0.00 3.160±1.53 1.632±0.65 2.270±0.78 4.836±0.00
ENST00000465661 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467005 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477349 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000498833 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.512±0.00 7.869±0.00 9.362±0.00
ENSG00000196683 ENST00000358435 N/A N/A 19.083±0.00 47.526±0.00 23.138±0.00 21.710±0.00 19.933±0.00 20.762±0.00 35.504±0.00 29.059±0.00 57.147±0.00 100.540±51.30 60.999±19.74 N/A
ENST00000372879 N/A 44.820±0.00 N/A N/A 28.568±0.00 N/A 27.796±0.00 N/A 13.108±0.00 44.146±0.00 N/A N/A N/A N/A
ENST00000405021 72.763±0.00 70.276±0.00 N/A 99.070±0.00 44.203±0.00 200.035±0.00 85.430±0.00 92.219±0.00 30.031±0.00 126.072±0.00 65.759±42.26 257.187±142.57 163.462±128.87 199.630±87.68
ENST00000463284 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483581 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496129 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000621567 234.333±0.00 276.813±0.00 N/A 183.684±0.00 211.687±0.00 439.245±0.00 238.962±0.00 161.383±0.00 79.168±0.00 495.044±0.00 293.245±0.00 331.468±116.96 184.766±130.48 297.496±54.03
ENSG00000221740 ENST00000408813 N/A N/A N/A N/A N/A 2.618±0.00 N/A N/A 0.649±0.00 1.611±0.00 N/A N/A N/A N/A
ENSG00000226279 ENST00000413498 0.340±0.00 0.720±0.00 N/A 0.277±0.00 0.332±0.00 0.166±0.00 0.080±0.00 0.090±0.00 0.026±0.00 0.057±0.00 0.311±0.00 0.295±0.25 0.221±0.00 0.246±0.10
ENSG00000226329 ENST00000452069 N/A N/A N/A 0.068±0.00 0.241±0.00 0.910±0.00 N/A 0.162±0.00 0.053±0.00 N/A N/A 0.102±0.00 0.235±0.06 N/A
ENSG00000228649 ENST00000415611 N/A 1.812±0.00 N/A 0.183±0.02 0.421±0.00 0.559±0.00 0.518±0.00 0.098±0.00 N/A 0.482±0.23 0.288±0.03 1.087±0.58 0.161±0.07 0.424±0.28
ENST00000422542 0.656±0.00 1.786±0.00 0.202±0.00 N/A 1.764±0.00 0.845±0.00 0.406±0.25 N/A 0.082±0.00 0.363±0.00 N/A 1.358±0.91 0.157±0.03 0.689±0.45
ENST00000432668 0.295±0.00 N/A N/A 0.154±0.00 N/A N/A N/A 0.204±0.00 0.162±0.00 0.268±0.00 0.918±0.00 0.424±0.00 0.175±0.00 0.115±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000028995 ENSMUST00000030849 3.139±0.43 12.991±2.58 1.246±0.07 6.778±4.24 2.282±0.69 1.916±0.78 1.163±0.67 1.873±0.46 6.360±5.71 3.546±0.79 0.383±0.14 9.333±3.66 4.892±3.55 9.500±0.42
ENSMUST00000101513 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 18.524±2.97
ENSMUST00000115109 N/A N/A N/A 2.395±0.00 N/A N/A N/A N/A N/A N/A N/A 53.133±0.00 8.353±8.48 28.916±0.00
ENSMUST00000126828 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147179 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000028998 ENSMUST00000030851 31.611±4.88 27.336±5.41 51.243±7.40 34.704±9.97 20.636±6.58 28.170±2.88 30.396±7.13 50.332±8.59 43.144±15.04 30.159±2.95 27.924±1.22 18.081±8.52 44.287±7.49 80.551±18.15
ENSMUSG00000097180 ENSMUST00000181574 2.632±1.47 1.069±0.37 2.236±0.88 2.819±1.75 2.244±0.51 3.291±1.39 1.095±0.33 1.021±0.25 4.959±5.32 1.279±0.54 0.435±0.13 3.782±1.29 2.607±2.00 0.798±0.28

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