C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Region Summary |
| CIL_0003GP_0001 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSG00000182093-ENSG00000157578 | CGP | 9606 | 21:39380244-39445805  |
|
| Gene | Transcript | Position | Biotype | |
ENSG00000157578  (LCA5L)Leber congenital amaurosis 5-like |
ENST00000288350 (LCA5L-001)
|
39405844-39445777 | protein_coding | |
|
ENST00000358268 (LCA5L-002)
|
39405860-39445733 | protein_coding | ||
|
ENST00000380671 (LCA5L-201)
|
39405844-39428522 | protein_coding | ||
|
ENST00000411566 (LCA5L-013)
|
39428215-39445733 | protein_coding | ||
|
ENST00000415863 (LCA5L-010)
|
39428285-39445769 | protein_coding | ||
|
ENST00000418018 (LCA5L-019)
|
39423245-39445760 | protein_coding | ||
|
ENST00000426783 (LCA5L-015)
|
39428305-39445769 | protein_coding | ||
|
ENST00000434281 (LCA5L-018)
|
39428208-39445803 | protein_coding | ||
|
ENST00000438404 (LCA5L-009)
|
39428210-39445719 | protein_coding | ||
|
ENST00000448288 (LCA5L-014)
|
39428172-39445778 | protein_coding | ||
|
ENST00000451131 (LCA5L-008)
|
39428462-39445752 | protein_coding | ||
|
ENST00000456017 (LCA5L-017)
|
39428402-39445780 | protein_coding | ||
|
ENST00000459939 (LCA5L-021)
|
39422988-39445761 | processed_transcript | ||
|
ENST00000466954 (LCA5L-012)
|
39423420-39445733 | processed_transcript | ||
|
ENST00000468009 (LCA5L-022)
|
39428222-39438936 | processed_transcript | ||
|
ENST00000480612 (LCA5L-011)
|
39443459-39445753 | retained_intron | ||
|
ENST00000484878 (LCA5L-016)
|
39411718-39445752 | processed_transcript | ||
|
ENST00000485895 (LCA5L-006)
|
39421560-39445777 | protein_coding | ||
|
ENST00000490184 (LCA5L-007)
|
39423240-39445775 | processed_transcript | ||
|
ENST00000491625 (LCA5L-003)
|
39422412-39445805 | retained_intron | ||
|
ENST00000495240 (LCA5L-020)
|
39405978-39411147 | processed_transcript | ||
|
ENSG00000182093 (WRB) tryptophan rich basic protein |
ENST00000333781 (WRB-001)
|
39380244-39397889 | protein_coding | |
|
ENST00000380708 (WRB-004)
|
39387765-39397889 | protein_coding | ||
|
ENST00000380713 (WRB-009)
|
39386093-39393280 | protein_coding | ||
|
ENST00000398753 (WRB-002)
|
39380458-39397116 | protein_coding | ||
|
ENST00000415847 (WRB-013)
|
39391778-39406446 | protein_coding | ||
|
ENST00000442773 (WRB-003)
|
39380487-39390803 | protein_coding | ||
|
ENST00000466787 (WRB-006)
|
39387791-39397254 | nonsense_mediated_decay | ||
|
ENST00000471468 (WRB-008)
|
39380414-39391205 | retained_intron | ||
|
ENST00000476914 (WRB-017)
|
39425871-39428528 | processed_transcript | ||
|
ENST00000478273 (WRB-018)
|
39410869-39428528 | protein_coding | ||
|
ENST00000480690 (WRB-016)
|
39425919-39428528 | processed_transcript | ||
|
ENST00000487869 (WRB-005)
|
39380394-39392046 | retained_intron | ||
|
ENST00000490860 (WRB-007)
|
39392896-39397104 | retained_intron | ||
|
ENST00000623703 (WRB-019)
|
39380354-39414288 | nonsense_mediated_decay | ||
| CIL_0003GP_0002 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSMUSG00000023147-ENSMUSG00000045275 | CGP | 10090 | 16:96145407-96192257 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSMUSG00000023147 (Wrb) tryptophan rich basic protein |
ENSMUST00000023913 (Wrb-001)
|
96145407-96157852 | protein_coding | |
|
ENSMUST00000135448 (Wrb-004)
|
96145411-96151840 | protein_coding | ||
|
ENSMUST00000138198 (Wrb-003)
|
96145407-96146764 | processed_transcript | ||
|
ENSMUST00000140476 (Wrb-002)
|
96145407-96154775 | retained_intron | ||
|
ENSMUSG00000045275 (Lca5l) Leber congenital amaurosis 5-like |
ENSMUST00000054855 (Lca5l-201)
|
96159068-96192257 | protein_coding | |
|
ENSMUST00000113804 (Lca5l-001)
|
96158407-96192250 | protein_coding | ||
|
ENSMUST00000142620 (Lca5l-002)
|
96160499-96192250 | retained_intron | ||
|
ENSMUST00000154445 (Lca5l-003)
|
96181433-96192257 | processed_transcript | ||
Expression Patterns
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