C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003HI_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000140057-ENSG00000090060 CGP 9606 14:96392111-96567111
GeneTranscriptPositionBiotype
ENSG00000090060 (PAPOLA)
poly(A) polymerase alpha 		ENST00000216277 (PAPOLA-001) 96502373-96567111 protein_coding
ENST00000392990 (PAPOLA-005) 96502558-96565428 protein_coding
ENST00000553357 (PAPOLA-011) 96502382-96532338 nonsense_mediated_decay
ENST00000553461 (PAPOLA-025) 96527442-96534889 protein_coding
ENST00000553689 (PAPOLA-003) 96502398-96565048 nonsense_mediated_decay
ENST00000553940 (PAPOLA-021) 96560438-96565059 retained_intron
ENST00000554130 (PAPOLA-012) 96502412-96531728 processed_transcript
ENST00000554135 (PAPOLA-019) 96547688-96552983 retained_intron
ENST00000554666 (PAPOLA-026) 96536895-96547904 retained_intron
ENST00000554887 (PAPOLA-010) 96501433-96527496 processed_transcript
ENST00000555021 (PAPOLA-016) 96535525-96537047 retained_intron
ENST00000555131 (PAPOLA-015) 96534223-96537059 retained_intron
ENST00000555224 (PAPOLA-024) 96521063-96532696 retained_intron
ENST00000555508 (PAPOLA-022) 96562458-96565106 retained_intron
ENST00000555626 (PAPOLA-006) 96502851-96564988 protein_coding
ENST00000555701 (PAPOLA-009) 96542182-96553532 retained_intron
ENST00000555912 (PAPOLA-007) 96525981-96531725 retained_intron
ENST00000556248 (PAPOLA-014) 96504289-96521072 processed_transcript
ENST00000556283 (PAPOLA-018) 96542729-96555950 retained_intron
ENST00000556459 (PAPOLA-020) 96547896-96565407 protein_coding
ENST00000556619 (PAPOLA-013) 96502542-96528002 protein_coding
ENST00000556787 (PAPOLA-017) 96541907-96552543 retained_intron
ENST00000557320 (PAPOLA-002) 96502401-96534885 protein_coding
ENST00000557406 (PAPOLA-023) 96521016-96531731 retained_intron
ENST00000557471 (PAPOLA-004) 96502441-96532248 protein_coding
ENSG00000140057 (AK7)
adenylate kinase 7 		ENST00000267584 (AK7-001) 96392111-96489427 protein_coding
ENST00000554313 (AK7-004) 96398198-96421566 processed_transcript
ENST00000554706 (AK7-005) 96482982-96488275 protein_coding
ENST00000555570 (AK7-002) 96392133-96399292 protein_coding
ENST00000556643 (AK7-003) 96392144-96405052 retained_intron
ENSG00000240051 (RPL23AP10)
ribosomal protein L23a pseudogene 10 		ENST00000489946 (RPL23AP10-001) 96456576-96457041 processed_pseudogene
ENSG00000259059 (PEBP1P1)
phosphatidylethanolamine binding protein 1 pseudogene 1 		ENST00000554856 (PEBP1P1-001) 96423700-96424209 processed_pseudogene
ENSG00000276182 (RP11-872J21.5)
 ENST00000618976 (RP11-872J21.5-001) 96537170-96537904 sense_intronic

Homo sapiens Ensembl (GRCh38)

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CIL_0003HI_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000041323-ENSMUSG00000021111 CGP 10090 12:105705982-105838944
GeneTranscriptPositionBiotype
ENSMUSG00000041323 (Ak7)
adenylate kinase 7 		ENSMUST00000040876 (Ak7-201) 105705982-105782447 protein_coding

Mus musculus Ensembl (GRCm38)

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Structures from Ensembl
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Transcripts
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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003HI_0001ENSG00000090060ENST00000216277ENST00000392990ENST00000553357ENST00000553461ENST00000553689ENST00000553940ENST00000554130ENST00000554135ENST00000554666ENST00000554887ENST00000555021ENST00000555131ENST00000555224ENST00000555508ENST00000555626ENST00000555701ENST00000555912ENST00000556248ENST00000556283ENST00000556459ENST00000556619ENST00000556787ENST00000557320ENST00000557406ENST00000557471ENSG00000140057ENST00000267584ENST00000554313ENST00000554706ENST00000555570ENST00000556643ENSG00000240051ENST00000489946ENSG00000259059ENST00000554856ENSG00000276182ENST00000618976CIL_0003HI_0002ENSMUSG00000041323ENSMUST00000040876
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003HI_0001ENSG00000090060ENST00000216277ENST00000554130ENST00000554887ENST00000557320ENSG00000140057ENST00000267584ENST00000554313ENST00000554706ENST00000555570ENST00000556643ENSG00000240051ENST00000489946ENSG00000259059ENST00000554856ENSG00000276182ENST00000618976CIL_0003HI_0002ENSMUSG00000041323ENSMUST00000040876
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000090060 ENST00000216277 20.531±0.00 18.137±0.00 3.182±0.00 5.956±0.00 13.355±2.89 18.145±12.79 11.530±7.85 11.066±3.94 11.549±0.66 9.829±5.43 11.517±0.00 19.003±8.73 15.807±1.15 27.001±10.64
ENST00000392990 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553357 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553461 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553689 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553940 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554130 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 33.644±0.00 49.591±0.00 92.679±0.00
ENST00000554135 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554666 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554887 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 31.502±0.00 45.019±0.00 86.347±0.00
ENST00000555021 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555131 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555224 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555508 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555626 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555701 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555912 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556248 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556283 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556459 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556619 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556787 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557320 N/A N/A 3.073±0.00 7.358±0.85 7.814±0.00 6.279±0.00 3.186±0.00 N/A N/A 7.994±2.02 2.216±0.00 6.017±0.00 N/A N/A
ENST00000557406 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557471 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000140057 ENST00000267584 0.136±0.00 0.142±0.00 0.205±0.00 1.290±0.00 0.192±0.00 0.365±0.15 0.053±0.00 0.722±0.67 0.147±0.12 2.322±1.53 0.093±0.04 0.869±0.64 0.084±0.03 4.293±1.31
ENST00000554313 N/A N/A N/A N/A N/A N/A 0.170±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000554706 N/A 0.644±0.00 N/A N/A 0.252±0.00 0.398±0.00 0.248±0.00 N/A N/A 1.247±0.00 0.270±0.00 N/A 0.107±0.02 N/A
ENST00000555570 0.131±0.00 0.459±0.00 N/A N/A 0.267±0.14 N/A 0.095±0.00 N/A 0.169±0.00 0.453±0.00 N/A N/A 0.090±0.03 N/A
ENST00000556643 N/A N/A N/A 1.388±0.00 N/A N/A N/A 0.397±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000240051 ENST00000489946 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.072±0.00 N/A 0.272±0.00 N/A 0.042±0.00
ENSG00000259059 ENST00000554856 N/A N/A N/A 0.068±0.00 N/A N/A 0.054±0.00 N/A N/A N/A N/A N/A N/A 0.158±0.00
ENSG00000276182 ENST00000618976 0.162±0.00 0.449±0.00 2.556±0.00 1.575±0.67 1.005±0.56 2.909±1.87 0.775±0.17 1.401±0.63 1.179±0.74 4.606±4.07 0.348±0.00 0.952±0.87 0.153±0.13 0.981±0.26
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000041323 ENSMUST00000040876 0.040±0.02 0.044±0.01 0.008±0.00 0.683±0.23 0.025±0.01 0.151±0.09 0.195±0.14 0.547±0.02 0.030±0.01 3.099±1.46 0.031±0.02 3.966±3.32 0.655±0.56 39.810±22.81

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