C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003I0_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000140749-ENSG00000155719 CGP 9606 16:21639537-21760729
GeneTranscriptPositionBiotype
ENSG00000140749 (IGSF6)
immunoglobulin superfamily, member 6 		ENST00000268389 (IGSF6-001) 21639537-21652660 protein_coding
ENST00000565499 (IGSF6-002) 21646386-21652608 retained_intron
ENST00000569602 (IGSF6-003) 21644290-21652606 protein_coding
ENSG00000155719 (OTOA)
otoancorin 		ENST00000286149 (OTOA-003) 21678514-21760548 protein_coding
ENST00000388956 (OTOA-002) 21684429-21760729 protein_coding
ENST00000388957 (OTOA-004) 21704963-21760728 protein_coding
ENST00000388958 (OTOA-001) 21678514-21760729 protein_coding
ENST00000563506 (OTOA-006) 21729571-21760723 retained_intron
ENST00000563871 (OTOA-005) 21704969-21760726 retained_intron
ENST00000569064 (OTOA-007) 21704967-21709948 processed_transcript
ENSG00000197006 (METTL9)
methyltransferase like 9 		ENST00000358154 (METTL9-001) 21599476-21657473 protein_coding
ENST00000396014 (METTL9-002) 21599558-21656119 protein_coding
ENST00000562379 (METTL9-003) 21599592-21625114 nonsense_mediated_decay
ENST00000562961 (METTL9-006) 21612100-21625115 protein_coding
ENST00000563026 (METTL9-009) 21597218-21598007 processed_transcript
ENST00000564733 (METTL9-010) 21651869-21657471 retained_intron
ENST00000567404 (METTL9-005) 21597222-21655324 protein_coding
ENST00000568826 (METTL9-004) 21612700-21655281 protein_coding
ENST00000569290 (METTL9-008) 21617898-21625233 protein_coding
ENST00000570074 (METTL9-007) 21599718-21618009 nonsense_mediated_decay
ENST00000615720 (METTL9-201) 21599794-21657473 protein_coding
ENSG00000207042 (RNU6-196P)
RNA, U6 small nuclear 196, pseudogene 		ENST00000384315 (RNU6-196P-201) 21642294-21642400 snRNA
ENSG00000207248 (RNU6-1005P)
RNA, U6 small nuclear 1005, pseudogene 		ENST00000384519 (RNU6-1005P-201) 21642054-21642160 snRNA
CIL_0003I0_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000035004-ENSMUSG00000034990 CGP 10090 7:121064067-121163097
GeneTranscriptPositionBiotype
ENSMUSG00000030876 (Mettl9)
methyltransferase like 9 		ENSMUST00000033163 (Mettl9-201) 121034445-121076834 protein_coding
ENSMUSG00000034990 (Otoa)
otoancorin 		ENSMUST00000047025 (Otoa-001) 121083322-121163097 protein_coding
ENSMUST00000163275 (Otoa-003) 121118390-121163091 processed_transcript
ENSMUST00000165409 (Otoa-002) 121118385-121160768 retained_intron
ENSMUST00000168311 (Otoa-005) 121083424-121091577 protein_coding
ENSMUST00000170106 (Otoa-006) 121083408-121102728 protein_coding
ENSMUST00000171880 (Otoa-004) 121083424-121091595 protein_coding
ENSMUSG00000035004 (Igsf6)
immunoglobulin superfamily, member 6 		ENSMUST00000047194 (Igsf6-201) 121064067-121074530 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003I0_0001ENSG00000140749ENST00000268389ENST00000565499ENST00000569602ENSG00000155719ENST00000286149ENST00000388956ENST00000388957ENST00000388958ENST00000563506ENST00000563871ENST00000569064ENSG00000197006ENST00000358154ENST00000396014ENST00000562379ENST00000562961ENST00000563026ENST00000564733ENST00000567404ENST00000568826ENST00000569290ENST00000570074ENST00000615720ENSG00000207042ENST00000384315ENSG00000207248ENST00000384519CIL_0003I0_0002ENSMUSG00000030876ENSMUST00000033163ENSMUSG00000034990ENSMUST00000047025ENSMUST00000163275ENSMUST00000165409ENSMUST00000168311ENSMUST00000170106ENSMUST00000171880ENSMUSG00000035004ENSMUST00000047194
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003I0_0001ENSG00000140749ENST00000268389ENSG00000155719ENST00000286149ENST00000388956ENST00000388957ENST00000388958ENST00000563506ENST00000563871ENSG00000197006ENST00000358154ENST00000396014ENST00000564733ENST00000615720ENSG00000207042ENST00000384315ENSG00000207248ENST00000384519CIL_0003I0_0002ENSMUSG00000030876ENSMUST00000033163ENSMUSG00000034990ENSMUST00000047025ENSMUST00000163275ENSMUST00000165409ENSMUST00000168311ENSMUST00000170106ENSMUSG00000035004ENSMUST00000047194
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000140749 ENST00000268389 N/A 8.290±0.00 N/A N/A 3.671±0.53 0.777±0.00 N/A 0.929±0.00 1.307±0.14 4.385±0.47 N/A 2.290±0.64 3.520±0.36 N/A
ENST00000565499 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569602 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000155719 ENST00000286149 N/A N/A N/A N/A N/A N/A N/A N/A 0.018±0.00 N/A N/A 0.016±0.00 N/A 0.126±0.00
ENST00000388956 N/A N/A N/A 0.013±0.00 N/A N/A N/A N/A N/A N/A N/A 0.060±0.00 N/A N/A
ENST00000388957 N/A N/A N/A N/A N/A N/A 0.049±0.03 N/A N/A 0.013±0.00 N/A 0.027±0.00 0.066±0.02 1.022±0.34
ENST00000388958 0.024±0.00 N/A N/A 0.031±0.00 N/A N/A 0.035±0.00 N/A N/A N/A N/A N/A 0.028±0.00 N/A
ENST00000563506 N/A N/A N/A 0.009±0.00 N/A 0.009±0.00 N/A N/A N/A N/A 0.042±0.00 N/A N/A N/A
ENST00000563871 0.028±0.00 0.104±0.00 N/A 0.027±0.00 0.038±0.00 0.026±0.00 0.005±0.00 0.079±0.00 0.030±0.00 0.046±0.03 0.005±0.00 0.016±0.01 N/A 0.256±0.00
ENST00000569064 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000197006 ENST00000358154 N/A N/A 4.335±0.00 3.786±0.00 3.270±1.13 1.217±0.00 3.364±2.03 0.522±0.00 1.625±0.75 4.649±2.49 2.689±0.53 4.587±2.07 6.078±3.52 N/A
ENST00000396014 24.445±0.00 18.536±0.00 4.673±0.00 11.317±5.13 12.314±6.79 13.431±8.01 7.886±5.35 20.667±19.80 4.873±1.91 16.186±8.96 10.323±5.77 18.611±8.04 19.025±10.87 14.604±0.00
ENST00000562379 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000562961 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563026 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564733 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.408±0.00 N/A 0.570±0.00
ENST00000567404 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568826 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569290 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000570074 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000615720 7.962±0.00 4.709±0.00 N/A 7.805±0.99 N/A 7.780±0.00 N/A 8.683±0.00 N/A N/A 2.391±0.00 6.772±1.22 7.293±3.33 3.903±2.02
ENSG00000207042 ENST00000384315 N/A N/A N/A N/A N/A 0.711±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000207248 ENST00000384519 N/A N/A N/A 0.384±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.688±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030876 ENSMUST00000033163 18.244±3.60 25.980±11.82 24.705±2.54 32.930±15.74 15.104±6.80 21.909±6.15 14.621±1.55 21.360±2.06 14.387±5.49 15.452±3.99 8.634±0.69 24.987±7.53 26.517±9.92 6.150±0.50
ENSMUSG00000034990 ENSMUST00000047025 N/A 0.108±0.02 0.020±0.00 0.020±0.00 N/A N/A 0.014±0.00 0.097±0.00 0.003±0.00 0.019±0.00 0.032±0.01 N/A 1.099±0.99 0.045±0.02
ENSMUST00000163275 0.028±0.01 0.225±0.10 0.018±0.00 0.039±0.00 0.047±0.01 0.021±0.00 0.021±0.01 0.109±0.02 0.013±0.01 0.028±0.00 0.051±0.00 0.146±0.07 1.212±0.98 0.097±0.04
ENSMUST00000165409 N/A 0.123±0.04 N/A 0.058±0.00 N/A N/A N/A 0.112±0.03 N/A N/A N/A 0.143±0.12 0.128±0.00 0.031±0.00
ENSMUST00000168311 N/A N/A 0.088±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000170106 0.057±0.01 0.421±0.01 N/A 0.058±0.00 0.147±0.00 N/A N/A N/A 0.009±0.00 N/A 0.101±0.00 0.228±0.01 N/A N/A
ENSMUST00000171880 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000035004 ENSMUST00000047194 1.398±0.54 0.996±0.29 1.208±0.00 0.526±0.00 1.799±0.54 0.569±0.23 0.529±0.05 0.200±0.10 3.445±3.36 1.444±0.69 0.112±0.04 1.595±0.47 0.460±0.14 0.117±0.04

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