C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003IT_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000137274-ENSG00000137267 CGP 9606 6:3118374-3157526
GeneTranscriptPositionBiotype
ENSG00000137267 (TUBB2A)
tubulin, beta 2A class IIa 		ENST00000333628 (TUBB2A-001) 3153669-3157526 protein_coding
ENST00000489942 (TUBB2A-002) 3154579-3157526 processed_transcript
ENSG00000137274 (BPHL)
biphenyl hydrolase-like (serine hydrolase) 		ENST00000380368 (BPHL-201) 3118808-3138083 protein_coding
ENST00000380375 (BPHL-202) 3119326-3152669 protein_coding
ENST00000380379 (BPHL-001) 3118692-3153578 protein_coding
ENST00000423798 (BPHL-010) 3140425-3153028 protein_coding
ENST00000424847 (BPHL-002) 3118376-3152669 nonsense_mediated_decay
ENST00000430655 (BPHL-004) 3118376-3153195 nonsense_mediated_decay
ENST00000433912 (BPHL-005) 3118692-3152645 nonsense_mediated_decay
ENST00000434640 (BPHL-007) 3118374-3152575 protein_coding
ENST00000464040 (BPHL-003) 3150014-3153046 processed_transcript
ENST00000479273 (BPHL-008) 3118728-3124143 retained_intron
ENST00000488487 (BPHL-009) 3126796-3152533 retained_intron
ENST00000490918 (BPHL-006) 3118726-3153062 retained_intron
ENSG00000228170 (RP1-40E16.11)
 ENST00000447644 (RP1-40E16.11-001) 3138394-3153062 antisense

Homo sapiens Ensembl (GRCh38)

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CIL_0003IT_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000038286-ENSMUSG00000058672 CGP 10090 13:34037641-34078008
GeneTranscriptPositionBiotype
ENSMUSG00000038286 (Bphl)
biphenyl hydrolase-like (serine hydrolase, breast epithelial mucin-associated antigen) 		ENSMUST00000040656 (Bphl-201) 34037641-34074074 protein_coding
ENSMUSG00000058672 (Tubb2a)
tubulin, beta 2A class IIA 		ENSMUST00000056427 (Tubb2a-201) 34074301-34078008 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

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Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003IT_0001ENSG00000137267ENST00000333628ENST00000489942ENSG00000137274ENST00000380368ENST00000380375ENST00000380379ENST00000423798ENST00000424847ENST00000430655ENST00000433912ENST00000434640ENST00000464040ENST00000479273ENST00000488487ENST00000490918ENSG00000228170ENST00000447644CIL_0003IT_0002ENSMUSG00000038286ENSMUST00000040656ENSMUSG00000058672ENSMUST00000056427
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003IT_0001ENSG00000137267ENST00000333628ENST00000489942ENSG00000137274ENST00000380368ENST00000380375ENST00000380379ENST00000433912ENST00000434640ENST00000479273ENST00000488487ENST00000490918ENSG00000228170ENST00000447644CIL_0003IT_0002ENSMUSG00000038286ENSMUST00000040656ENSMUSG00000058672ENSMUST00000056427
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000137267 ENST00000333628 6.063±0.00 3.618±0.00 0.793±0.00 71.496±22.80 17.249±15.51 4.159±3.68 1.821±1.41 9.690±5.83 5.495±4.41 2.834±2.54 1.824±0.85 5.639±3.46 26.138±8.76 2.968±2.09
ENST00000489942 N/A N/A 0.278±0.00 N/A 0.390±0.00 0.543±0.00 N/A N/A 2.007±0.00 N/A N/A N/A N/A N/A
ENSG00000137274 ENST00000380368 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.535±0.00 N/A 3.561±0.00 2.391±0.00 N/A
ENST00000380375 N/A N/A 2.706±0.00 3.693±0.00 N/A N/A N/A N/A 0.766±0.00 0.418±0.00 0.578±0.00 2.231±0.13 2.407±0.05 N/A
ENST00000380379 N/A N/A 3.427±0.00 1.136±0.00 1.651±1.22 0.844±0.46 0.877±0.00 4.212±0.41 2.372±0.00 0.899±0.00 0.356±0.00 1.199±0.00 N/A 0.995±0.00
ENST00000423798 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000424847 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000430655 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000433912 2.049±0.00 2.541±0.00 N/A 1.088±0.00 0.807±0.00 2.467±0.00 1.504±0.00 7.387±0.00 4.433±3.59 N/A 0.669±0.00 2.439±0.29 1.920±0.14 2.261±0.00
ENST00000434640 2.341±0.00 N/A N/A 3.446±0.00 6.537±0.00 N/A 1.952±0.00 3.848±0.00 N/A 2.892±0.00 N/A N/A 1.830±0.00 3.043±0.00
ENST00000464040 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479273 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.670±0.00 N/A N/A N/A N/A
ENST00000488487 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.618±0.00 N/A 1.131±0.00 1.199±0.00
ENST00000490918 0.534±0.00 0.459±0.00 0.472±0.00 0.400±0.14 0.968±0.42 N/A N/A 0.794±0.00 N/A 0.103±0.00 N/A 1.189±0.23 N/A 0.904±0.50
ENSG00000228170 ENST00000447644 4.261±0.00 3.995±0.00 7.824±0.00 4.042±0.16 6.658±4.15 3.689±0.68 3.041±0.17 17.372±7.84 7.126±4.60 2.323±1.65 1.040±0.45 6.118±2.01 3.678±1.00 3.094±1.12
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000038286 ENSMUST00000040656 31.019±8.01 61.888±9.42 37.105±2.68 10.722±0.00 23.613±1.91 17.176±2.76 15.614±0.47 206.956±18.20 82.647±51.10 22.985±1.65 14.999±1.29 30.416±5.94 7.661±4.89 3.761±1.99
ENSMUSG00000058672 ENSMUST00000056427 69.933±9.61 16.006±2.78 57.639±7.81 113.522±0.00 42.434±3.75 35.799±3.29 25.444±0.88 36.091±2.07 109.168±46.58 75.254±14.57 3.897±0.44 54.235±20.89 26.210±13.51 4.724±1.66

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