C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003JA_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000061759-ENSDARG00000061747 CGP 7955 9:34746176-34835263
GeneTranscriptPositionBiotype
ENSDARG00000061747 (C9HXorf36)
chromosome X open reading frame 36 		ENSDART00000088441 (C9HXorf36-001) 34821310-34835263 protein_coding
ENSDART00000150035 (C9HXorf36-002) 34821310-34835263 protein_coding
ENSDARG00000061759 (kdm6a)
lysine (K)-specific demethylase 6A 		ENSDART00000088469 (kdm6a-201) 34746413-34820186 protein_coding
ENSDART00000131470 (kdm6a-002) 34768233-34794257 processed_transcript
ENSDART00000144623 (kdm6a-001) 34746176-34819911 protein_coding
CIL_0003JA_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000147050-ENSG00000147113 CGP 9606 X:44873177-45200901
GeneTranscriptPositionBiotype
ENSG00000147050 (KDM6A)
lysine (K)-specific demethylase 6A 		ENST00000377967 (KDM6A-001) 44873511-45112602 protein_coding
ENST00000382899 (KDM6A-201) 44873177-45112598 protein_coding
ENST00000414389 (KDM6A-002) 45059346-45112602 protein_coding
ENST00000431196 (KDM6A-008) 45090817-45111662 protein_coding
ENST00000433797 (KDM6A-003) 45060057-45112602 protein_coding
ENST00000451692 (KDM6A-005) 45059282-45063676 protein_coding
ENST00000475233 (KDM6A-004) 44873715-45020730 processed_transcript
ENST00000479423 (KDM6A-009) 45106940-45110249 processed_transcript
ENST00000484732 (KDM6A-007) 45082586-45086225 processed_transcript
ENST00000485072 (KDM6A-006) 45082398-45083523 processed_transcript
ENST00000536777 (KDM6A-202) 44873177-45112598 protein_coding
ENST00000543216 (KDM6A-203) 44873177-45112598 protein_coding
ENST00000611820 (KDM6A-204) 44873177-45112598 protein_coding
ENST00000621147 (KDM6A-205) 44873552-45111411 protein_coding
ENSG00000147113 (CXorf36)
chromosome X open reading frame 36 		ENST00000377934 (CXorf36-003) 45162310-45200901 protein_coding
ENST00000398000 (CXorf36-001) 45148374-45200901 protein_coding
ENST00000477281 (CXorf36-002) 45149900-45191933 processed_transcript
ENST00000492138 (CXorf36-004) 45191393-45191869 processed_transcript
ENSG00000229491 (RP11-342D14.1)
 ENST00000438181 (RP11-342D14.1-002) 45183251-45333557 antisense
ENST00000450246 (RP11-342D14.1-003) 45320458-45325580 antisense
ENST00000450527 (RP11-342D14.1-001) 45183251-45333917 antisense
CIL_0003JA_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000037369-ENSMUSG00000037358 CGP 10090 X:18162575-18461397
GeneTranscriptPositionBiotype
ENSMUSG00000037358 (4930578C19Rik)
RIKEN cDNA 4930578C19 gene 		ENSMUST00000044188 (4930578C19Rik-001) 18418427-18461371 protein_coding
ENSMUST00000147039 (4930578C19Rik-002) 18414881-18461397 processed_transcript
ENSMUSG00000037369 (Kdm6a)
lysine (K)-specific demethylase 6A 		ENSMUST00000044484 (Kdm6a-001) 18162575-18279936 protein_coding
ENSMUST00000052368 (Kdm6a-002) 18162575-18279936 protein_coding
ENSMUST00000130978 (Kdm6a-003) 18162648-18258968 retained_intron
ENSMUST00000155161 (Kdm6a-004) 18274512-18278260 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003JA_0001ENSDARG00000061747ENSDART00000088441ENSDART00000150035ENSDARG00000061759ENSDART00000088469ENSDART00000131470ENSDART00000144623CIL_0003JA_0002ENSG00000147050ENST00000377967ENST00000382899ENST00000414389ENST00000431196ENST00000433797ENST00000451692ENST00000475233ENST00000479423ENST00000484732ENST00000485072ENST00000536777ENST00000543216ENST00000611820ENST00000621147ENSG00000147113ENST00000377934ENST00000398000ENST00000477281ENST00000492138ENSG00000229491ENST00000438181ENST00000450246ENST00000450527CIL_0003JA_0003ENSMUSG00000037358ENSMUST00000044188ENSMUST00000147039ENSMUSG00000037369ENSMUST00000044484ENSMUST00000052368ENSMUST00000130978ENSMUST00000155161
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003JA_0001ENSDARG00000061747ENSDART00000088441ENSDART00000150035ENSDARG00000061759ENSDART00000088469ENSDART00000144623CIL_0003JA_0002ENSG00000147050ENST00000377967ENST00000382899ENST00000414389ENST00000431196ENST00000433797ENST00000479423ENST00000536777ENST00000543216ENST00000611820ENST00000621147ENSG00000147113ENST00000377934ENST00000398000ENST00000477281ENSG00000229491ENST00000438181ENST00000450246CIL_0003JA_0003ENSMUSG00000037358ENSMUST00000044188ENSMUST00000147039ENSMUSG00000037369ENSMUST00000044484ENSMUST00000052368ENSMUST00000130978
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000061747 ENSDART00000088441 N/A N/A N/A 0.379±0.00 N/A N/A 4.343±1.86 0.608±0.00 N/A N/A 0.241±0.00 N/A N/A N/A
ENSDART00000150035 N/A N/A N/A 0.361±0.16 N/A N/A 1.307±0.39 3.346±2.27 N/A N/A N/A N/A N/A N/A
ENSDARG00000061759 ENSDART00000088469 N/A N/A N/A 4.088±1.99 N/A N/A N/A 3.502±0.66 0.090±0.00 N/A N/A N/A N/A N/A
ENSDART00000131470 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000144623 N/A N/A N/A 2.063±1.49 N/A N/A 1.046±0.51 7.177±0.00 0.065±0.00 N/A 0.290±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000147050 ENST00000377967 N/A 0.349±0.00 0.769±0.00 0.370±0.00 0.973±0.00 0.567±0.11 0.586±0.00 N/A 0.564±0.00 2.128±0.00 1.163±0.00 1.165±0.40 0.725±0.21 1.111±0.53
ENST00000382899 0.684±0.00 N/A N/A N/A N/A N/A N/A N/A 0.569±0.00 1.469±0.00 N/A 1.085±0.18 N/A 0.681±0.00
ENST00000414389 1.003±0.00 0.911±0.00 0.937±0.00 0.646±0.00 1.993±0.48 1.055±0.18 N/A 2.038±0.00 1.092±0.00 0.824±0.00 0.424±0.00 1.872±0.53 N/A N/A
ENST00000431196 N/A 3.964±0.00 N/A N/A 4.466±0.00 2.965±0.00 N/A 5.043±0.00 1.441±0.00 N/A N/A 4.910±0.00 1.556±0.00 4.686±0.00
ENST00000433797 N/A N/A N/A 0.418±0.00 0.655±0.00 N/A 0.393±0.00 1.256±0.00 0.734±0.00 N/A N/A 1.238±0.00 0.711±0.11 1.398±0.32
ENST00000451692 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475233 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479423 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.717±0.00
ENST00000484732 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485072 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000536777 N/A N/A N/A 0.981±0.00 N/A N/A N/A N/A 0.175±0.00 N/A 0.875±0.24 N/A 0.288±0.00 N/A
ENST00000543216 N/A 0.461±0.00 N/A N/A N/A N/A 0.547±0.00 N/A N/A N/A N/A 0.633±0.00 0.426±0.00 N/A
ENST00000611820 N/A N/A N/A N/A 1.154±0.00 N/A N/A N/A 0.236±0.00 N/A N/A N/A N/A 1.055±0.00
ENST00000621147 1.189±0.00 N/A N/A N/A N/A N/A 0.606±0.00 0.707±0.00 N/A N/A 1.598±0.00 N/A N/A N/A
ENSG00000147113 ENST00000377934 9.760±0.00 8.754±0.00 0.150±0.00 0.149±0.00 2.151±1.31 1.823±1.43 1.341±0.55 0.484±0.00 0.362±0.26 0.626±0.00 0.401±0.00 0.799±0.42 N/A 0.508±0.41
ENST00000398000 38.757±0.00 11.019±0.00 0.526±0.00 1.456±1.06 6.615±5.64 3.533±3.47 3.314±2.58 1.552±0.00 0.639±0.31 3.286±2.47 2.491±0.92 2.554±1.86 32.559±17.27 2.013±1.68
ENST00000477281 13.408±0.00 N/A N/A N/A 0.464±0.00 0.340±0.00 0.954±0.00 0.238±0.00 0.481±0.00 0.489±0.00 N/A 1.536±0.00 N/A 0.128±0.00
ENST00000492138 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000229491 ENST00000438181 N/A 0.416±0.00 N/A 0.245±0.10 0.264±0.00 0.155±0.00 0.058±0.00 0.254±0.00 0.056±0.00 0.154±0.00 N/A 0.144±0.13 0.162±0.00 0.077±0.02
ENST00000450246 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.110±0.00
ENST00000450527 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000037358 ENSMUST00000044188 3.837±2.19 1.223±0.29 N/A 0.130±0.08 2.190±0.64 0.483±0.14 1.308±0.08 0.492±0.21 0.011±0.00 3.924±1.05 N/A 1.323±0.76 0.074±0.00 0.095±0.03
ENSMUST00000147039 1.236±0.58 0.447±0.26 N/A 0.033±0.00 0.753±0.28 0.146±0.07 N/A 0.262±0.00 0.011±0.00 1.009±0.56 N/A 0.570±0.35 0.092±0.05 0.041±0.02
ENSMUSG00000037369 ENSMUST00000044484 3.260±1.92 4.289±1.12 3.450±0.69 3.535±2.05 3.785±1.85 2.236±1.30 1.764±0.35 2.869±0.38 3.515±2.17 2.265±0.14 1.318±0.27 4.261±1.85 3.290±1.28 0.434±0.18
ENSMUST00000052368 N/A 2.162±1.40 N/A N/A 1.207±0.07 N/A N/A 0.633±0.00 0.516±0.03 N/A 0.368±0.00 2.474±0.52 1.049±0.21 0.448±0.00
ENSMUST00000130978 2.404±1.08 1.201±0.23 N/A 1.165±0.01 3.567±2.40 1.189±0.16 0.910±0.14 1.314±0.42 0.389±0.02 1.239±0.28 N/A 3.226±1.02 0.710±0.00 0.232±0.00
ENSMUST00000155161 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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