C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0003JQ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000097465-ENSDARG00000077264 CGP 7955 17:24642960-24663840
GeneTranscriptPositionBiotype
ENSDARG00000059131 (spdya)
speedy homolog A (Xenopus laevis)
ENSDART00000082251 (spdya-001) 24637378-24643377 protein_coding
ENSDART00000130871 (spdya-201) 24637463-24643375 protein_coding
ENSDART00000135282 (spdya-003) 24637413-24638592 retained_intron
ENSDART00000135986 (spdya-005) 24637900-24641134 protein_coding
ENSDART00000141327 (spdya-004) 24637869-24640628 retained_intron
ENSDART00000147871 (spdya-002) 24637409-24640899 protein_coding
ENSDARG00000097465 (TRMT61B)
tRNA methyltransferase 61 homolog B (S. cerevisiae)
ENSDART00000156606 (TRMT61B-001) 24642960-24648716 protein_coding
CIL_0003JQ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000171103-ENSG00000163811 CGP 9606 2:28849821-28948222
GeneTranscriptPositionBiotype
ENSG00000222224 (Y_RNA)
Y RNA
ENST00000410292 (Y_RNA.1-795) 28927243-28927340 misc_RNA
ENSG00000265706 (SNORD53_SNORD92)
Small nucleolar RNA SNORD53/SNORD92
ENST00000577887 (SNORD53_SNORD92.1-201) 28927983-28928060 snoRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003JQ_0001ENSDARG00000059131ENSDART00000082251ENSDART00000130871ENSDART00000135282ENSDART00000135986ENSDART00000141327ENSDART00000147871ENSDARG00000097465ENSDART00000156606CIL_0003JQ_0002ENSG00000222224ENST00000410292ENSG00000265706ENST00000577887
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003JQ_0001ENSDARG00000059131ENSDART00000082251ENSDART00000147871ENSDARG00000097465ENSDART00000156606CIL_0003JQ_0002ENSG00000222224ENST00000410292ENSG00000265706ENST00000577887
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000059131 ENSDART00000082251 N/A N/A N/A N/A N/A N/A N/A 1.506±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000130871 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000135282 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000135986 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000141327 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000147871 N/A N/A N/A N/A N/A N/A N/A 2.967±0.00 0.304±0.00 N/A N/A N/A N/A N/A
ENSDARG00000097465 ENSDART00000156606 N/A N/A N/A 2.450±0.74 N/A N/A 1.475±1.07 2.225±0.78 0.960±0.00 N/A 2.041±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000222224 ENST00000410292 N/A 0.718±0.00 N/A N/A N/A N/A N/A 0.676±0.00 N/A N/A N/A N/A N/A 0.164±0.00
ENSG00000265706 ENST00000577887 0.745±0.00 1.497±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.238±0.00 N/A N/A

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