C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003M2_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000029358-ENSDARG00000042126 CGP 7955 25:17762426-17835572
GeneTranscriptPositionBiotype
ENSDARG00000029358 (e2f4)
E2F transcription factor 4 		ENSDART00000018119 (e2f4-001) 17762426-17776315 protein_coding
ENSDART00000153967 (e2f4-002) 17767312-17773661 processed_transcript
ENSDARG00000042126 (ELMO3)
engulfment and cell motility 3 		ENSDART00000061738 (ELMO3-201) 17790723-17835572 protein_coding
CIL_0003M2_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000205250-ENSG00000102890 CGP 9606 16:67192169-67204029
GeneTranscriptPositionBiotype
ENSG00000102890 (ELMO3)
engulfment and cell motility 3 		ENST00000360833 (ELMO3-001) 67199111-67204029 protein_coding
ENST00000393997 (ELMO3-003) 67199111-67204029 protein_coding
ENST00000477898 (ELMO3-002) 67199509-67204029 protein_coding
ENST00000571587 (ELMO3-004) 67199166-67201548 nonsense_mediated_decay
ENST00000571638 (ELMO3-005) 67199951-67201599 processed_transcript
ENSG00000205250 (E2F4)
E2F transcription factor 4, p107/p130-binding 		ENST00000379378 (E2F4-001) 67192169-67198918 protein_coding
ENST00000561904 (E2F4-013) 67192215-67194918 retained_intron
ENST00000563238 (E2F4-007) 67192213-67193484 retained_intron
ENST00000564718 (E2F4-011) 67192495-67194825 processed_transcript
ENST00000565226 (E2F4-005) 67194952-67198229 protein_coding
ENST00000565849 (E2F4-010) 67192190-67194819 nonsense_mediated_decay
ENST00000566368 (E2F4-012) 67192527-67193060 retained_intron
ENST00000567007 (E2F4-002) 67192185-67198917 retained_intron
ENST00000567228 (E2F4-004) 67195651-67198219 retained_intron
ENST00000568485 (E2F4-009) 67192174-67193278 retained_intron
ENST00000568693 (E2F4-003) 67193978-67194799 retained_intron
ENST00000568839 (E2F4-006) 67192207-67196008 nonsense_mediated_decay
ENST00000569573 (E2F4-008) 67192208-67196008 nonsense_mediated_decay
CIL_0003M2_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000014859-ENSMUSG00000014791 CGP 10090 8:105297663-105310623
GeneTranscriptPositionBiotype
ENSMUSG00000014791 (Elmo3)
engulfment and cell motility 3 		ENSMUST00000109375 (Elmo3-201) 105305601-105310623 protein_coding
ENSMUSG00000014859 (E2f4)
E2F transcription factor 4 		ENSMUST00000015003 (E2f4-201) 105297663-105305369 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003M2_0001ENSDARG00000029358ENSDART00000018119ENSDART00000153967ENSDARG00000042126ENSDART00000061738CIL_0003M2_0002ENSG00000102890ENST00000360833ENST00000393997ENST00000477898ENST00000571587ENST00000571638ENSG00000205250ENST00000379378ENST00000561904ENST00000563238ENST00000564718ENST00000565226ENST00000565849ENST00000566368ENST00000567007ENST00000567228ENST00000568485ENST00000568693ENST00000568839ENST00000569573CIL_0003M2_0003ENSMUSG00000014791ENSMUST00000109375ENSMUSG00000014859ENSMUST00000015003
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003M2_0001ENSDARG00000029358ENSDART00000018119ENSDARG00000042126ENSDART00000061738CIL_0003M2_0002ENSG00000102890ENST00000360833ENST00000393997ENST00000477898ENST00000571638ENSG00000205250ENST00000379378ENST00000561904ENST00000563238ENST00000564718ENST00000565849ENST00000567007CIL_0003M2_0003ENSMUSG00000014791ENSMUST00000109375ENSMUSG00000014859ENSMUST00000015003
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000029358 ENSDART00000018119 N/A N/A N/A 6.515±0.84 N/A N/A 4.049±1.58 2.410±1.56 1.096±0.00 N/A 2.969±0.00 N/A N/A N/A
ENSDART00000153967 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000042126 ENSDART00000061738 N/A N/A N/A 1.561±0.19 N/A N/A 5.299±1.48 2.543±0.00 0.116±0.00 N/A 0.696±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000102890 ENST00000360833 N/A 0.234±0.00 N/A N/A 0.438±0.00 N/A N/A N/A 0.058±0.00 N/A N/A 0.510±0.00 1.776±0.00 N/A
ENST00000393997 N/A N/A N/A N/A 0.858±0.00 N/A N/A 3.161±0.00 0.097±0.00 1.011±0.00 N/A 0.945±0.29 3.145±0.21 N/A
ENST00000477898 N/A 0.920±0.00 0.426±0.00 0.084±0.06 1.034±0.00 1.349±0.20 0.114±0.00 2.626±2.38 N/A N/A 0.065±0.00 0.310±0.00 5.192±1.61 4.120±0.00
ENST00000571587 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000571638 N/A N/A N/A N/A 0.656±0.00 N/A 0.158±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000205250 ENST00000379378 16.930±0.00 32.809±0.00 0.839±0.00 4.178±1.70 9.076±5.79 8.491±4.48 7.383±6.31 12.098±8.86 5.200±0.44 9.908±8.62 10.316±7.63 24.515±14.12 37.755±9.34 20.631±2.61
ENST00000561904 N/A N/A N/A N/A N/A N/A 0.550±0.00 N/A N/A 1.288±0.00 N/A 2.312±0.00 N/A 11.992±0.00
ENST00000563238 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 15.249±0.00 14.455±0.00
ENST00000564718 N/A N/A 1.356±0.00 N/A N/A 2.043±0.00 N/A N/A N/A 1.153±0.00 N/A 14.347±0.00 17.431±0.00 N/A
ENST00000565226 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565849 N/A N/A N/A N/A 3.390±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566368 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567007 N/A N/A N/A 1.004±0.41 N/A N/A N/A N/A N/A 0.360±0.00 N/A N/A N/A N/A
ENST00000567228 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568485 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568693 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568839 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569573 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000014791 ENSMUST00000109375 7.663±0.47 6.166±0.31 8.464±1.30 0.623±0.06 6.730±2.34 31.381±5.49 0.880±0.26 18.587±2.20 7.839±3.81 16.674±0.26 0.569±0.10 6.970±3.28 2.808±1.34 2.150±0.00
ENSMUSG00000014859 ENSMUST00000015003 37.865±6.82 39.922±2.63 26.188±5.12 29.076±10.69 43.292±15.25 46.174±6.67 18.215±2.69 30.901±2.17 96.411±92.55 43.727±1.71 12.939±1.04 53.914±19.98 41.278±6.85 14.825±6.67

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