C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003MN_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000056499-ENSDARG00000022456 CGP 7955 23:22929075-22972140
GeneTranscriptPositionBiotype
ENSDARG00000022456 (eno1a)
enolase 1a, (alpha) 		ENSDART00000009337 (eno1a-001) 22950619-22972140 protein_coding
ENSDART00000133322 (eno1a-002) 22950685-22968881 protein_coding
ENSDART00000138086 (eno1a-004) 22950656-22961285 retained_intron
ENSDART00000141498 (eno1a-005) 22968985-22971946 retained_intron
ENSDART00000148136 (eno1a-003) 22950687-22956680 retained_intron
ENSDARG00000056499 (ca6)
carbonic anhydrase VI 		ENSDART00000079007 (ca6-201) 22929076-22944653 protein_coding
ENSDART00000132733 (ca6-001) 22929075-22944810 protein_coding
ENSDART00000139717 (ca6-003) 22937546-22941824 nonsense_mediated_decay
ENSDART00000141127 (ca6-002) 22937806-22944720 nonsense_mediated_decay

Danio rerio Ensembl (Zv9)

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Structures from Ensembl
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CIL_0003MN_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000028972-ENSMUSG00000063524 CGP 10090 4:150187015-150248879
GeneTranscriptPositionBiotype
ENSMUSG00000028972 (Car6)
carbonic anhydrase 6 		ENSMUST00000030817 (Car6-001) 150187015-150201332 protein_coding
ENSMUST00000105683 (Car6-002) 150187015-150198470 protein_coding
ENSMUST00000126449 (Car6-003) 150188239-150198203 processed_transcript
ENSMUST00000134648 (Car6-004) 150187212-150196123 processed_transcript
ENSMUSG00000063524 (Eno1)
enolase 1, alpha non-neuron 		ENSMUST00000080149 (Eno1-002) 150243486-150248873 protein_coding
ENSMUST00000080926 (Eno1-001) 150236952-150248879 protein_coding
ENSMUST00000130632 (Eno1-003) 150237240-150242727 retained_intron
ENSMUST00000133789 (Eno1-007) 150246397-150247557 retained_intron
ENSMUST00000133839 (Eno1-006) 150237240-150245333 protein_coding
ENSMUST00000135063 (Eno1-010) 150244235-150246892 retained_intron
ENSMUST00000136310 (Eno1-011) 150247565-150248629 retained_intron
ENSMUST00000141931 (Eno1-005) 150237700-150242142 protein_coding
ENSMUST00000148605 (Eno1-009) 150237243-150239936 retained_intron
ENSMUST00000150175 (Eno1-004) 150236721-150244289 protein_coding
ENSMUST00000151057 (Eno1-008) 150247460-150248287 retained_intron
ENSMUSG00000082140 (Gm13094)
predicted gene 13094 		ENSMUST00000117930 (Gm13094-001) 150228035-150228443 processed_pseudogene

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003MN_0001ENSDARG00000022456ENSDART00000009337ENSDART00000133322ENSDART00000138086ENSDART00000141498ENSDART00000148136ENSDARG00000056499ENSDART00000079007ENSDART00000132733ENSDART00000139717ENSDART00000141127CIL_0003MN_0002ENSMUSG00000028972ENSMUST00000030817ENSMUST00000105683ENSMUST00000126449ENSMUST00000134648ENSMUSG00000063524ENSMUST00000080149ENSMUST00000080926ENSMUST00000130632ENSMUST00000133789ENSMUST00000133839ENSMUST00000135063ENSMUST00000136310ENSMUST00000141931ENSMUST00000148605ENSMUST00000150175ENSMUST00000151057ENSMUSG00000082140ENSMUST00000117930
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003MN_0001ENSDARG00000022456ENSDART00000009337ENSDART00000133322ENSDART00000141498ENSDART00000148136ENSDARG00000056499ENSDART00000079007ENSDART00000132733CIL_0003MN_0002ENSMUSG00000028972ENSMUST00000030817ENSMUST00000105683ENSMUST00000126449ENSMUST00000134648ENSMUSG00000063524ENSMUST00000080149ENSMUST00000080926ENSMUST00000133839ENSMUST00000135063ENSMUST00000150175ENSMUSG00000082140ENSMUST00000117930
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000022456 ENSDART00000009337 N/A N/A N/A 162.057±146.03 N/A N/A 194.657±95.97 10.539±9.30 1.964±0.00 N/A 103.410±0.00 N/A N/A N/A
ENSDART00000133322 N/A N/A N/A N/A N/A N/A N/A N/A 0.722±0.00 N/A 43.187±0.00 N/A N/A N/A
ENSDART00000138086 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000141498 N/A N/A N/A 86.055±26.72 N/A N/A N/A 38.536±0.00 N/A N/A 47.277±0.00 N/A N/A N/A
ENSDART00000148136 N/A N/A N/A N/A N/A N/A 1.448±0.00 0.343±0.00 N/A N/A N/A N/A N/A N/A
ENSDARG00000056499 ENSDART00000079007 N/A N/A N/A 2.235±1.47 N/A N/A 60.549±40.28 13.942±9.21 0.354±0.00 N/A 3.036±0.00 N/A N/A N/A
ENSDART00000132733 N/A N/A N/A 1.342±0.56 N/A N/A 45.132±0.00 15.507±0.00 N/A N/A 1.345±0.00 N/A N/A N/A
ENSDART00000139717 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000141127 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000028972 ENSMUST00000030817 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.019±0.00 0.037±0.00
ENSMUST00000105683 N/A N/A N/A 0.013±0.00 N/A 0.055±0.00 N/A N/A 0.016±0.01 0.049±0.00 N/A 0.044±0.00 0.126±0.10 0.025±0.00
ENSMUST00000126449 N/A N/A N/A 0.044±0.00 0.197±0.02 N/A N/A N/A 0.192±0.00 0.039±0.03 N/A 0.017±0.00 N/A 0.076±0.00
ENSMUST00000134648 0.098±0.00 N/A N/A N/A 0.129±0.00 N/A N/A N/A N/A N/A N/A 0.114±0.00 0.128±0.10 0.053±0.00
ENSMUSG00000063524 ENSMUST00000080149 N/A 110.120±47.12 N/A N/A N/A 22.898±2.90 N/A N/A 24.989±8.60 N/A N/A 66.951±0.00 N/A N/A
ENSMUST00000080926 254.127±93.61 146.961±42.64 137.343±9.18 151.223±3.39 192.797±87.25 138.764±26.30 44.837±13.03 283.678±14.14 127.159±39.37 58.478±12.92 10.566±4.03 111.242±36.19 173.738±114.22 63.628±6.52
ENSMUST00000130632 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000133789 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000133839 76.179±0.83 N/A N/A N/A 136.033±0.00 N/A 30.545±3.78 N/A N/A N/A 16.636±6.08 62.068±4.36 N/A N/A
ENSMUST00000135063 N/A N/A N/A 365.914±0.00 N/A N/A N/A N/A N/A N/A N/A 241.494±0.00 300.101±114.85 121.214±0.00
ENSMUST00000136310 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141931 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148605 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150175 N/A N/A N/A 2296.950±0.00 N/A N/A N/A N/A N/A N/A N/A 659.399±674.60 1440.464±1623.99 428.176±596.40
ENSMUST00000151057 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000082140 ENSMUST00000117930 0.132±0.01 0.168±0.01 0.080±0.02 0.025±0.00 0.597±0.79 0.180±0.01 0.225±0.12 0.250±0.03 0.119±0.08 0.171±0.05 0.141±0.04 0.495±0.21 0.198±0.16 0.241±0.11

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