C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003N9_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000188215-ENSG00000102897 CGP 9606 16:20854925-20925006
GeneTranscriptPositionBiotype
ENSG00000102897 (LYRM1)
LYR motif containing 1 		ENST00000219168 (LYRM1-201) 20900753-20925004 protein_coding
ENST00000396052 (LYRM1-001) 20901104-20925006 protein_coding
ENST00000412082 (LYRM1-002) 20900235-20925004 protein_coding
ENST00000439021 (LYRM1-202) 20900235-20925004 protein_coding
ENST00000562740 (LYRM1-005) 20900666-20924381 protein_coding
ENST00000564457 (LYRM1-007) 20899868-20900491 processed_transcript
ENST00000567165 (LYRM1-003) 20900411-20921463 nonsense_mediated_decay
ENST00000567954 (LYRM1-006) 20900799-20924116 protein_coding
ENST00000568663 (LYRM1-008) 20899902-20924263 protein_coding
ENST00000568820 (LYRM1-004) 20900491-20922007 nonsense_mediated_decay
ENST00000569023 (LYRM1-009) 20900450-20924116 protein_coding
ENSG00000188215 (DCUN1D3)
DCN1, defective in cullin neddylation 1, domain containing 3 		ENST00000324344 (DCUN1D3-001) 20854925-20900384 protein_coding
ENST00000563934 (DCUN1D3-002) 20858996-20868980 protein_coding
CIL_0003N9_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000048787-ENSMUSG00000030922 CGP 10090 7:119853163-119916756
GeneTranscriptPositionBiotype
ENSMUSG00000030922 (Lyrm1)
LYR motif containing 1 		ENSMUST00000054440 (Lyrm1-002) 119895867-119916285 protein_coding
ENSMUST00000106516 (Lyrm1-003) 119900108-119916756 protein_coding
ENSMUST00000106517 (Lyrm1-004) 119896292-119916750 protein_coding
ENSMUST00000106518 (Lyrm1-001) 119895861-119916754 protein_coding
ENSMUSG00000048787 (Dcun1d3)
DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae) 		ENSMUST00000059851 (Dcun1d3-001) 119853163-119895745 protein_coding
ENSMUST00000098080 (Dcun1d3-003) 119855813-119895543 protein_coding
ENSMUST00000106519 (Dcun1d3-002) 119857325-119896291 protein_coding
ENSMUST00000137888 (Dcun1d3-005) 119859621-119861804 protein_coding
ENSMUST00000142120 (Dcun1d3-004) 119857993-119861832 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003N9_0001ENSG00000102897ENST00000219168ENST00000396052ENST00000412082ENST00000439021ENST00000562740ENST00000564457ENST00000567165ENST00000567954ENST00000568663ENST00000568820ENST00000569023ENSG00000188215ENST00000324344ENST00000563934CIL_0003N9_0002ENSMUSG00000030922ENSMUST00000054440ENSMUST00000106516ENSMUST00000106517ENSMUST00000106518ENSMUSG00000048787ENSMUST00000059851ENSMUST00000098080ENSMUST00000106519ENSMUST00000137888ENSMUST00000142120
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003N9_0001ENSG00000102897ENST00000219168ENST00000412082ENST00000439021ENST00000567954ENSG00000188215ENST00000324344ENST00000563934CIL_0003N9_0002ENSMUSG00000030922ENSMUST00000054440ENSMUST00000106516ENSMUST00000106517ENSMUST00000106518ENSMUSG00000048787ENSMUST00000059851ENSMUST00000098080ENSMUST00000106519ENSMUST00000137888ENSMUST00000142120
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000102897 ENST00000219168 N/A N/A N/A 7.956±0.00 N/A N/A 2.885±0.00 N/A N/A N/A 2.586±0.00 N/A N/A N/A
ENST00000396052 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000412082 N/A N/A N/A 10.292±0.00 N/A N/A N/A N/A N/A N/A 4.404±0.00 11.510±0.00 17.495±0.00 N/A
ENST00000439021 10.855±0.00 13.465±0.00 N/A N/A 17.920±0.00 14.823±0.00 21.370±0.00 14.002±4.89 32.121±0.00 9.647±0.00 1.368±0.00 19.378±0.00 N/A N/A
ENST00000562740 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564457 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567165 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567954 N/A N/A N/A 10.167±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568663 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568820 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569023 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000188215 ENST00000324344 4.828±0.00 3.497±0.00 N/A 2.089±0.00 9.111±0.00 N/A 3.310±0.00 3.500±0.85 4.043±0.73 2.029±0.44 0.966±0.00 6.863±2.84 3.289±0.69 N/A
ENST00000563934 8.808±0.00 N/A N/A N/A 14.304±0.00 N/A N/A N/A 7.245±0.00 N/A 1.461±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030922 ENSMUST00000054440 0.278±0.00 0.553±0.00 N/A 1.635±0.00 0.890±0.12 0.543±0.29 1.182±0.00 N/A 0.347±0.12 N/A 0.953±0.00 0.551±0.12 0.963±0.35 11.519±0.00
ENSMUST00000106516 0.775±0.45 N/A 0.436±0.00 0.496±0.08 N/A 0.476±0.00 0.384±0.07 0.869±0.24 0.325±0.19 0.604±0.09 0.880±0.20 0.097±0.00 0.423±0.08 N/A
ENSMUST00000106517 0.311±0.24 0.422±0.15 0.558±0.16 0.939±0.06 0.395±0.25 0.252±0.09 0.360±0.10 0.460±0.00 0.178±0.06 0.287±0.09 0.854±0.24 0.448±0.26 0.206±0.08 3.275±0.00
ENSMUST00000106518 0.801±0.32 0.507±0.21 2.696±0.55 2.281±0.30 1.183±0.69 0.569±0.32 1.617±0.25 1.807±0.79 0.789±0.20 0.545±0.41 3.136±0.76 1.066±0.69 1.870±0.95 N/A
ENSMUSG00000048787 ENSMUST00000059851 2.513±0.18 1.380±0.21 2.916±0.08 3.458±2.40 2.305±0.29 0.848±0.29 0.813±0.35 1.943±0.28 0.798±0.30 2.743±0.47 1.419±0.24 1.880±0.93 0.993±0.36 3.724±1.52
ENSMUST00000098080 1.244±0.22 0.446±0.17 1.267±0.13 0.830±0.01 1.597±0.67 0.360±0.09 0.442±0.10 1.122±0.18 0.584±0.17 0.953±0.17 0.812±0.22 0.785±0.37 1.407±0.27 N/A
ENSMUST00000106519 N/A 0.646±0.11 N/A N/A 1.037±0.00 N/A N/A N/A N/A N/A N/A 1.542±0.00 1.430±0.20 20.240±14.04
ENSMUST00000137888 N/A 6.398±1.36 N/A N/A 5.006±0.00 5.225±1.79 N/A N/A 3.978±0.00 N/A N/A 9.896±2.73 N/A N/A
ENSMUST00000142120 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.929±0.47 N/A N/A

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