C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003NU_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000142327-ENSG00000142330 CGP 9606 2:240565804-240617705
GeneTranscriptPositionBiotype
ENSG00000142327 (RNPEPL1)
arginyl aminopeptidase (aminopeptidase B)-like 1 		ENST00000270357 (RNPEPL1-001) 240568687-240581372 protein_coding
ENST00000437406 (RNPEPL1-004) 240575502-240578724 protein_coding
ENST00000451363 (RNPEPL1-005) 240565804-240576727 protein_coding
ENST00000460884 (RNPEPL1-008) 240574819-240575610 retained_intron
ENST00000464550 (RNPEPL1-007) 240574722-240577690 processed_transcript
ENST00000471657 (RNPEPL1-010) 240575298-240577642 retained_intron
ENST00000481757 (RNPEPL1-003) 240573870-240578724 retained_intron
ENST00000486058 (RNPEPL1-002) 240568861-240578727 retained_intron
ENST00000493398 (RNPEPL1-006) 240574554-240576966 retained_intron
ENST00000498042 (RNPEPL1-009) 240575074-240575776 retained_intron
ENSG00000142330 (CAPN10)
calpain 10 		ENST00000270361 (CAPN10-008) 240586871-240599084 nonsense_mediated_decay
ENST00000270364 (CAPN10-006) 240586772-240617705 protein_coding
ENST00000352879 (CAPN10-002) 240586871-240599084 protein_coding
ENST00000354082 (CAPN10-007) 240586871-240599084 protein_coding
ENST00000357048 (CAPN10-003) 240586871-240599084 nonsense_mediated_decay
ENST00000391983 (CAPN10-009) 240586871-240599109 nonsense_mediated_decay
ENST00000391984 (CAPN10-001) 240586716-240599109 protein_coding
ENST00000404753 (CAPN10-005) 240586739-240599104 protein_coding
ENST00000416591 (CAPN10-004) 240586871-240599084 nonsense_mediated_decay
ENST00000426297 (CAPN10-016) 240598024-240607520 nonsense_mediated_decay
ENST00000432084 (CAPN10-017) 240590992-240592878 protein_coding
ENST00000463653 (CAPN10-012) 240586734-240589810 retained_intron
ENST00000465943 (CAPN10-013) 240594241-240595103 retained_intron
ENST00000483602 (CAPN10-014) 240595146-240596702 retained_intron
ENST00000493058 (CAPN10-015) 240595234-240598399 retained_intron
ENST00000494738 (CAPN10-010) 240589884-240599103 retained_intron
ENSG00000144504 (ANKMY1)
ankyrin repeat and MYND domain containing 1 		ENST00000272972 (ANKMY1-001) 240479422-240557974 protein_coding
ENST00000361678 (ANKMY1-002) 240479422-240558021 protein_coding
ENST00000373318 (ANKMY1-012) 240479422-240557962 protein_coding
ENST00000391987 (ANKMY1-201) 240479422-240558021 protein_coding
ENST00000391988 (ANKMY1-023) 240500544-240520527 protein_coding
ENST00000401804 (ANKMY1-010) 240479609-240558002 protein_coding
ENST00000403283 (ANKMY1-005) 240479427-240561110 protein_coding
ENST00000405002 (ANKMY1-006) 240521938-240561091 protein_coding
ENST00000405523 (ANKMY1-009) 240519755-240558021 protein_coding
ENST00000406958 (ANKMY1-011) 240479422-240557963 protein_coding
ENST00000407275 (ANKMY1-024) 240480993-240500104 protein_coding
ENST00000411765 (ANKMY1-017) 240554979-240560826 protein_coding
ENST00000418505 (ANKMY1-022) 240532076-240569209 protein_coding
ENST00000418708 (ANKMY1-021) 240529041-240569177 protein_coding
ENST00000441168 (ANKMY1-016) 240525685-240561091 protein_coding
ENST00000443318 (ANKMY1-019) 240525804-240560776 protein_coding
ENST00000459901 (ANKMY1-014) 240523258-240555560 retained_intron
ENST00000462004 (ANKMY1-020) 240526237-240560769 processed_transcript
ENST00000464991 (ANKMY1-003) 240552742-240561445 retained_intron
ENST00000477316 (ANKMY1-018) 240553034-240557406 retained_intron
ENST00000480230 (ANKMY1-015) 240521939-240527881 retained_intron
ENST00000484526 (ANKMY1-004) 240521939-240561091 retained_intron
ENST00000489677 (ANKMY1-025) 240500524-240507809 retained_intron
ENST00000496300 (ANKMY1-007) 240523823-240560768 retained_intron
ENSG00000178623 (GPR35)
G protein-coupled receptor 35 		ENST00000319838 (GPR35-002) 240605431-240631259 protein_coding
ENST00000403859 (GPR35-003) 240605445-240631170 protein_coding
ENST00000407714 (GPR35-004) 240625245-240630882 protein_coding
ENST00000430267 (GPR35-201) 240618943-240631258 protein_coding
ENST00000438013 (GPR35-001) 240627433-240631253 protein_coding
ENSG00000260942 (CAPN10-AS1)
CAPN10 antisense RNA 1 (head to head) 		ENST00000567819 (CAPN10-AS1-001) 240582700-240586699 antisense
CIL_0003NU_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000026269-ENSMUSG00000026270 CGP 10090 1:92910783-92947941
GeneTranscriptPositionBiotype
ENSMUSG00000026269 (Rnpepl1)
arginyl aminopeptidase (aminopeptidase B)-like 1 		ENSMUST00000027487 (Rnpepl1-001) 92910783-92920841 protein_coding
ENSMUST00000178116 (Rnpepl1-008) 92911121-92916737 nonsense_mediated_decay
ENSMUST00000178361 (Rnpepl1-009) 92917012-92918073 retained_intron
ENSMUST00000178662 (Rnpepl1-012) 92916805-92919216 retained_intron
ENSMUST00000178778 (Rnpepl1-010) 92917416-92919217 retained_intron
ENSMUST00000178816 (Rnpepl1-003) 92915844-92920572 retained_intron
ENSMUST00000179127 (Rnpepl1-004) 92916791-92920572 protein_coding
ENSMUST00000179531 (Rnpepl1-005) 92919614-92924384 nonsense_mediated_decay
ENSMUST00000179837 (Rnpepl1-011) 92917147-92919065 protein_coding
ENSMUST00000179854 (Rnpepl1-002) 92910825-92920572 retained_intron
ENSMUST00000179993 (Rnpepl1-007) 92911209-92915933 protein_coding
ENSMUST00000180306 (Rnpepl1-006) 92910853-92913408 retained_intron
ENSMUSG00000026270 (Capn10)
calpain 10 		ENSMUST00000027488 (Capn10-001) 92934376-92947941 protein_coding
ENSMUST00000117814 (Capn10-002) 92934766-92940972 protein_coding
ENSMUST00000128429 (Capn10-004) 92942704-92943744 retained_intron
ENSMUST00000136598 (Capn10-006) 92946885-92947590 retained_intron
ENSMUST00000152983 (Capn10-003) 92934833-92947929 nonsense_mediated_decay
ENSMUST00000153828 (Capn10-005) 92946553-92946955 processed_transcript
ENSMUST00000187342 (Capn10-007) 92940459-92945103 nonsense_mediated_decay

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003NU_0001ENSG00000142327ENST00000270357ENST00000437406ENST00000464550ENST00000471657ENST00000486058ENST00000493398ENSG00000142330ENST00000270361ENST00000352879ENST00000354082ENST00000391983ENST00000391984ENST00000404753ENST00000416591ENST00000426297ENST00000432084ENST00000463653ENST00000483602ENST00000494738ENSG00000144504ENST00000272972ENST00000405002ENST00000406958ENST00000443318ENST00000459901ENST00000464991ENST00000484526ENSG00000178623ENST00000319838ENST00000403859ENST00000430267ENST00000438013ENSG00000260942ENST00000567819CIL_0003NU_0002ENSMUSG00000026269ENSMUST00000027487ENSMUST00000178116ENSMUST00000178816ENSMUST00000179127ENSMUST00000179837ENSMUST00000179854ENSMUST00000180306ENSMUSG00000026270ENSMUST00000027488ENSMUST00000117814ENSMUST00000152983
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000142327 ENST00000270357 N/A N/A 0.265±0.00 N/A N/A 0.450±0.00 0.347±0.00 0.239±0.00 0.335±0.00 0.895±0.00 N/A N/A N/A N/A
ENST00000437406 22.527±0.00 29.322±0.00 N/A N/A 29.312±27.04 24.508±0.00 16.363±14.83 35.850±0.00 19.565±0.00 22.260±0.00 27.122±0.00 20.049±10.70 21.293±2.79 18.155±0.00
ENST00000451363 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000460884 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464550 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 36.303±0.00 N/A N/A
ENST00000471657 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.139±0.00 49.789±0.00 28.990±0.00 N/A
ENST00000481757 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486058 7.748±0.00 17.989±0.00 N/A 5.604±0.00 N/A 5.235±3.59 N/A 0.941±0.00 8.079±7.18 10.294±0.00 14.279±0.00 9.917±2.45 9.624±0.00 12.269±0.00
ENST00000493398 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 40.911±0.00 16.431±0.00 N/A
ENST00000498042 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000142330 ENST00000270361 1.528±0.00 N/A N/A 2.143±0.00 2.158±0.00 4.837±0.00 3.247±0.00 8.959±0.00 2.002±0.00 3.823±0.00 N/A 5.415±0.00 2.047±0.43 4.866±0.00
ENST00000270364 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000352879 N/A N/A N/A 1.890±1.35 N/A N/A 3.223±0.00 N/A 1.851±0.00 4.416±0.00 0.902±0.00 N/A N/A N/A
ENST00000354082 N/A 3.064±0.00 N/A N/A N/A N/A N/A N/A N/A 0.561±0.00 N/A 2.458±0.00 1.166±0.33 N/A
ENST00000357048 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000391983 N/A N/A 0.227±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000391984 N/A 2.031±0.00 N/A 0.228±0.00 N/A N/A 1.463±0.00 N/A N/A N/A N/A 5.495±1.91 1.614±0.20 4.923±0.00
ENST00000404753 0.488±0.00 N/A 0.137±0.00 N/A 1.461±0.53 N/A 1.896±0.00 N/A 0.246±0.00 N/A 0.544±0.00 N/A N/A 2.733±0.00
ENST00000416591 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.245±0.00 N/A 0.585±0.18 1.738±0.00
ENST00000426297 N/A N/A 0.793±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000432084 N/A N/A N/A N/A N/A N/A N/A 0.672±0.00 N/A N/A N/A N/A N/A N/A
ENST00000463653 N/A N/A N/A N/A N/A N/A N/A 1.385±0.00 0.433±0.00 N/A N/A N/A N/A N/A
ENST00000465943 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483602 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.958±0.00 N/A N/A N/A
ENST00000493058 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494738 N/A N/A N/A N/A N/A N/A 0.247±0.00 0.074±0.00 N/A N/A N/A N/A N/A 1.780±0.00
ENSG00000144504 ENST00000272972 N/A N/A N/A 2.754±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 21.983±0.00
ENST00000361678 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000373318 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000391987 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000391988 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000401804 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000403283 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000405002 N/A N/A N/A 0.393±0.00 N/A N/A N/A N/A N/A N/A N/A 0.828±0.00 N/A N/A
ENST00000405523 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000406958 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.337±0.00
ENST00000407275 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000411765 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000418505 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000418708 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000441168 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000443318 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.758±0.00 N/A N/A N/A
ENST00000459901 N/A N/A N/A N/A 0.812±0.00 0.549±0.00 N/A N/A N/A 1.265±0.00 N/A N/A N/A N/A
ENST00000462004 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464991 N/A N/A 1.002±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477316 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480230 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484526 N/A 6.250±0.00 N/A N/A N/A 0.943±0.00 N/A 0.277±0.00 N/A 3.251±0.00 N/A 3.554±0.00 N/A N/A
ENST00000489677 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496300 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000178623 ENST00000319838 N/A N/A N/A N/A N/A 0.985±0.00 N/A N/A N/A N/A N/A 13.936±9.22 N/A N/A
ENST00000403859 N/A N/A N/A N/A N/A 1.254±0.00 N/A N/A N/A 0.349±0.00 N/A N/A N/A N/A
ENST00000407714 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000430267 0.763±0.00 3.256±0.00 N/A N/A N/A 7.224±0.00 N/A N/A N/A 0.454±0.00 0.279±0.00 7.776±0.00 N/A N/A
ENST00000438013 N/A N/A N/A N/A 0.750±0.00 1.392±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000260942 ENST00000567819 0.117±0.00 0.649±0.00 0.096±0.00 0.270±0.20 0.070±0.00 0.210±0.10 0.146±0.05 0.311±0.22 0.150±0.00 0.189±0.03 0.025±0.00 0.604±0.18 0.141±0.02 0.651±0.17
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026269 ENSMUST00000027487 32.784±6.98 34.017±3.83 14.963±3.54 9.931±0.07 27.216±9.26 50.043±13.36 13.411±5.05 40.376±8.16 11.537±4.22 39.764±5.53 12.794±2.46 25.648±13.47 7.416±4.67 18.509±3.27
ENSMUST00000178116 N/A 84.030±26.19 N/A N/A 41.740±6.21 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000178361 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000178662 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000178778 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000178816 13.835±0.45 26.193±5.33 8.092±2.00 6.600±0.85 13.863±4.62 27.735±5.65 6.003±2.16 11.546±3.07 5.944±2.83 25.381±5.20 3.692±0.00 9.960±2.26 4.922±1.85 8.196±2.58
ENSMUST00000179127 N/A 28.054±0.00 N/A N/A 16.153±3.63 31.903±0.00 16.300±0.00 14.138±1.39 11.773±0.98 N/A 7.009±0.82 8.541±1.96 7.220±3.19 11.041±2.87
ENSMUST00000179531 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000179837 N/A N/A N/A 27.456±0.00 N/A N/A N/A N/A N/A N/A N/A 59.540±0.00 21.635±6.55 N/A
ENSMUST00000179854 N/A N/A 1.946±0.00 2.286±0.41 N/A N/A N/A N/A N/A N/A N/A 7.091±2.44 N/A N/A
ENSMUST00000179993 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000180306 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.687±0.00
ENSMUSG00000026270 ENSMUST00000027488 6.125±0.97 9.498±2.23 7.456±0.67 14.344±10.12 7.312±1.57 10.984±2.29 2.462±0.40 11.997±1.22 10.930±4.04 9.203±1.63 1.645±0.33 12.098±6.06 6.421±3.84 13.970±0.37
ENSMUST00000117814 2.633±0.38 8.599±0.80 2.886±0.52 5.373±0.81 2.244±0.00 4.688±0.58 0.877±0.21 5.349±1.22 2.099±0.29 N/A N/A 4.566±0.13 4.126±1.38 N/A
ENSMUST00000128429 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136598 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152983 N/A N/A N/A 5.703±0.00 N/A N/A N/A N/A N/A N/A 0.730±0.26 5.002±2.31 5.816±1.78 7.807±0.00
ENSMUST00000153828 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000187342 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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