C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003O9_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000158158-ENSG00000168763 CGP 9606 2:96760902-96833911
GeneTranscriptPositionBiotype
ENSG00000158158 (CNNM4)
cyclin and CBS domain divalent metal cation transport mediator 4 		ENST00000377075 (CNNM4-001) 96760902-96811891 protein_coding
ENST00000482716 (CNNM4-002) 96788590-96797610 processed_transcript
ENST00000493384 (CNNM4-004) 96788619-96799184 processed_transcript
ENST00000496186 (CNNM4-003) 96788590-96808686 processed_transcript
ENSG00000163126 (ANKRD23)
ankyrin repeat domain 23 		ENST00000318357 (ANKRD23-001) 96837912-96844034 protein_coding
ENST00000331001 (ANKRD23-003) 96837915-96844021 protein_coding
ENST00000418232 (ANKRD23-002) 96837914-96844005 protein_coding
ENST00000462692 (ANKRD23-007) 96840059-96857934 processed_transcript
ENST00000476975 (ANKRD23-008) 96824526-96842117 processed_transcript
ENST00000482175 (ANKRD23-004) 96838732-96841242 retained_intron
ENSG00000168763 (CNNM3)
cyclin and CBS domain divalent metal cation transport mediator 3 		ENST00000305510 (CNNM3-001) 96816250-96833911 protein_coding
ENST00000377060 (CNNM3-002) 96816245-96833911 protein_coding
ENST00000465224 (CNNM3-004) 96825175-96833577 retained_intron
ENST00000480035 (CNNM3-006) 96828566-96832573 processed_transcript
ENST00000494595 (CNNM3-005) 96826833-96827980 retained_intron
ENSG00000273265 (RP11-353K11.1)
 ENST00000608609 (RP11-353K11.1-001) 96812239-96813657 lincRNA

Homo sapiens Ensembl (GRCh38)

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CIL_0003O9_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000037408-ENSMUSG00000001138 CGP 10090 1:36471620-36528237
GeneTranscriptPositionBiotype
ENSMUSG00000001138 (Cnnm3)
cyclin M3 		ENSMUST00000001166 (Cnnm3-001) 36511867-36528237 protein_coding
ENSMUST00000097776 (Cnnm3-002) 36511867-36528237 protein_coding
ENSMUST00000135100 (Cnnm3-004) 36520761-36525600 retained_intron
ENSMUST00000154225 (Cnnm3-003) 36513097-36520435 retained_intron
ENSMUSG00000037408 (Cnnm4)
cyclin M4 		ENSMUST00000153128 (Cnnm4-001) 36471620-36508764 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003O9_0001ENSG00000158158ENST00000377075ENST00000482716ENST00000493384ENST00000496186ENSG00000163126ENST00000318357ENST00000331001ENST00000418232ENST00000462692ENST00000476975ENST00000482175ENSG00000168763ENST00000305510ENST00000377060ENST00000465224ENST00000480035ENST00000494595ENSG00000273265ENST00000608609CIL_0003O9_0002ENSMUSG00000001138ENSMUST00000001166ENSMUST00000097776ENSMUST00000135100ENSMUST00000154225ENSMUSG00000037408ENSMUST00000153128
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003O9_0001ENSG00000158158ENST00000377075ENST00000482716ENST00000493384ENST00000496186ENSG00000163126ENST00000318357ENST00000331001ENST00000418232ENST00000462692ENST00000476975ENSG00000168763ENST00000305510ENST00000377060ENST00000465224ENSG00000273265ENST00000608609CIL_0003O9_0002ENSMUSG00000001138ENSMUST00000001166ENSMUST00000097776ENSMUST00000135100ENSMUSG00000037408ENSMUST00000153128
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000158158 ENST00000377075 0.640±0.00 1.218±0.00 0.452±0.00 1.390±0.67 1.272±0.13 2.902±2.14 0.997±0.25 1.064±0.89 0.667±0.17 2.059±0.89 3.013±2.00 4.914±3.69 2.574±0.63 7.255±2.92
ENST00000482716 N/A N/A N/A N/A N/A N/A N/A 0.679±0.00 N/A N/A N/A N/A N/A N/A
ENST00000493384 N/A N/A 0.443±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496186 N/A N/A N/A N/A N/A N/A 1.885±0.00 N/A N/A N/A 3.032±0.00 N/A N/A N/A
ENSG00000163126 ENST00000318357 N/A N/A N/A N/A 9.178±0.00 N/A 3.249±0.00 N/A N/A N/A 192.405±6.45 N/A N/A N/A
ENST00000331001 N/A N/A N/A N/A N/A N/A 0.480±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000418232 N/A N/A N/A N/A 9.269±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 7.450±0.00
ENST00000462692 N/A N/A 1.447±0.00 N/A N/A N/A 0.710±0.00 N/A 2.054±0.00 N/A N/A N/A N/A N/A
ENST00000476975 N/A 3.849±0.00 N/A N/A N/A N/A N/A N/A N/A 5.863±0.00 N/A N/A N/A N/A
ENST00000482175 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000168763 ENST00000305510 11.101±0.00 5.218±0.00 1.356±0.00 2.479±1.40 3.947±0.00 11.654±0.00 2.488±0.00 5.414±1.99 8.384±0.00 4.440±3.77 N/A 10.836±4.72 6.565±2.82 7.440±0.78
ENST00000377060 N/A N/A N/A N/A 3.946±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465224 N/A N/A N/A N/A 1.879±0.00 N/A 0.524±0.00 N/A N/A N/A N/A 2.983±0.00 N/A N/A
ENST00000480035 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494595 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000273265 ENST00000608609 0.484±0.00 1.066±0.00 N/A 0.300±0.00 0.179±0.00 0.549±0.35 0.160±0.00 0.388±0.00 0.030±0.00 0.772±0.00 0.511±0.00 0.505±0.39 0.396±0.25 1.764±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000001138 ENSMUST00000001166 5.312±0.63 8.772±1.87 5.834±0.76 3.195±1.85 6.046±1.79 7.521±0.87 1.876±0.40 7.331±1.22 3.066±0.89 8.624±2.05 0.618±0.00 6.937±3.06 2.458±1.09 1.531±0.40
ENSMUST00000097776 N/A 2.368±0.43 N/A 3.555±1.92 1.614±0.41 1.401±0.18 1.526±0.32 1.348±0.00 0.328±0.00 N/A 2.212±0.66 3.033±0.40 0.836±0.32 N/A
ENSMUST00000135100 N/A 12.558±1.32 N/A N/A N/A N/A N/A N/A 3.225±0.00 N/A N/A N/A N/A N/A
ENSMUST00000154225 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000037408 ENSMUST00000153128 1.848±0.60 1.293±0.24 3.280±0.16 1.028±0.58 2.659±0.30 105.949±12.48 1.294±0.16 6.489±0.58 0.931±0.25 2.669±0.45 0.760±0.31 3.439±1.20 1.788±0.82 5.862±2.04

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