C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003P0_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000119669-ENSG00000198894 CGP 9606 14:77024543-77117287
GeneTranscriptPositionBiotype
ENSG00000119669 (IRF2BPL)
interferon regulatory factor 2 binding protein-like 		ENST00000238647 (IRF2BPL-001) 77024543-77028699 protein_coding
ENSG00000165548 (TMEM63C)
transmembrane protein 63C 		ENST00000298351 (TMEM63C-001) 77181827-77259495 protein_coding
ENST00000554346 (TMEM63C-006) 77181827-77218963 protein_coding
ENST00000554766 (TMEM63C-005) 77181623-77231730 protein_coding
ENST00000555338 (TMEM63C-002) 77175850-77219501 protein_coding
ENST00000555588 (TMEM63C-004) 77175856-77213630 retained_intron
ENST00000556514 (TMEM63C-003) 77175853-77218922 protein_coding
ENST00000557408 (TMEM63C-007) 77116568-77218884 protein_coding
ENST00000557504 (TMEM63C-008) 77251709-77256794 retained_intron
ENSG00000198894 (CIPC)
CLOCK-interacting pacemaker 		ENST00000361786 (CIPC-001) 77098097-77117287 protein_coding
ENST00000554447 (CIPC-007) 77099113-77113572 protein_coding
ENST00000554658 (CIPC-005) 77098312-77113522 protein_coding
ENST00000555200 (CIPC-008) 77099176-77113542 protein_coding
ENST00000555437 (CIPC-002) 77098126-77113566 protein_coding
ENST00000555611 (CIPC-004) 77098282-77113545 protein_coding
ENST00000556863 (CIPC-003) 77098258-77106090 retained_intron
ENST00000557115 (CIPC-006) 77098366-77113588 protein_coding
ENSG00000246548 (RP11-7F17.5)
 ENST00000500215 (RP11-7F17.5-001) 77041064-77069503 lincRNA
ENSG00000258473 (RP11-7F17.4)
 ENST00000554043 (RP11-7F17.4-001) 77048172-77086446 lincRNA
ENSG00000258819 (RP11-7F17.3)
 ENST00000555512 (RP11-7F17.3-002) 77070663-77076344 lincRNA
ENST00000556781 (RP11-7F17.3-003) 77074542-77076142 lincRNA
ENST00000557526 (RP11-7F17.3-001) 77069180-77076191 lincRNA
ENSG00000273729 (RP11-7F17.8)
 ENST00000619017 (RP11-7F17.8-001) 77028086-77031572 antisense

Homo sapiens Ensembl (GRCh38)

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Structures from Ensembl
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Structures from Ensembl
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CIL_0003P0_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000034168-ENSMUSG00000034157 CGP 10090 12:86880703-86965362
GeneTranscriptPositionBiotype
ENSMUSG00000034157 (Cipc)
CLOCK interacting protein, circadian 		ENSMUST00000038369 (Cipc-201) 86947343-86965362 protein_coding
ENSMUST00000185434 (Cipc-002) 86947043-86963807 nonsense_mediated_decay
ENSMUST00000185783 (Cipc-005) 86947454-86960390 nonsense_mediated_decay
ENSMUST00000186499 (Cipc-010) 86947466-86960307 protein_coding
ENSMUST00000187814 (Cipc-001) 86947343-86965362 protein_coding
ENSMUST00000188046 (Cipc-006) 86947418-86960391 nonsense_mediated_decay
ENSMUST00000188901 (Cipc-008) 86947396-86953165 retained_intron
ENSMUST00000189246 (Cipc-004) 86947043-86962158 protein_coding
ENSMUST00000190588 (Cipc-007) 86947490-86961883 nonsense_mediated_decay
ENSMUST00000191032 (Cipc-003) 86947099-86961967 nonsense_mediated_decay
ENSMUST00000191463 (Cipc-009) 86952657-86962833 protein_coding
ENSMUSG00000034168 (Irf2bpl)
interferon regulatory factor 2 binding protein-like 		ENSMUST00000038422 (Irf2bpl-201) 86880703-86884814 protein_coding
ENSMUSG00000097208 (Gm26698)
predicted gene, 26698 		ENSMUST00000181290 (Gm26698-201) 86891404-86892567 lincRNA

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003P0_0001ENSG00000119669ENST00000238647ENSG00000165548ENST00000298351ENST00000554346ENST00000554766ENST00000555338ENST00000555588ENST00000556514ENST00000557408ENST00000557504ENSG00000198894ENST00000361786ENST00000554447ENST00000554658ENST00000555200ENST00000555437ENST00000555611ENST00000556863ENST00000557115ENSG00000246548ENST00000500215ENSG00000258473ENST00000554043ENSG00000258819ENST00000555512ENST00000556781ENST00000557526ENSG00000273729ENST00000619017CIL_0003P0_0002ENSMUSG00000034157ENSMUST00000038369ENSMUST00000185434ENSMUST00000185783ENSMUST00000186499ENSMUST00000187814ENSMUST00000188046ENSMUST00000188901ENSMUST00000189246ENSMUST00000190588ENSMUST00000191032ENSMUST00000191463ENSMUSG00000034168ENSMUST00000038422ENSMUSG00000097208ENSMUST00000181290
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003P0_0001ENSG00000119669ENST00000238647ENSG00000165548ENST00000298351ENSG00000198894ENST00000361786ENSG00000246548ENST00000500215ENSG00000258473ENST00000554043ENSG00000258819ENST00000555512ENST00000556781ENST00000557526ENSG00000273729ENST00000619017CIL_0003P0_0002ENSMUSG00000034157ENSMUST00000038369ENSMUST00000185434ENSMUST00000191463ENSMUSG00000034168ENSMUST00000038422ENSMUSG00000097208ENSMUST00000181290
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000119669 ENST00000238647 17.922±0.00 13.443±0.00 1.351±0.00 8.581±6.30 11.534±9.59 10.411±9.79 3.154±2.41 13.965±13.10 6.114±3.37 16.621±15.42 4.645±4.49 24.855±21.09 17.719±2.33 21.752±4.55
ENSG00000165548 ENST00000298351 N/A N/A N/A 5.587±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.377±0.07 4.012±1.16
ENST00000554346 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554766 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555338 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555588 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556514 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557408 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557504 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000198894 ENST00000361786 6.245±0.00 1.574±0.00 N/A 11.487±2.01 3.712±1.79 6.164±0.00 8.219±2.75 3.291±0.00 2.519±0.52 4.013±1.18 13.580±7.02 3.572±1.96 2.065±1.06 6.444±0.28
ENST00000554447 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554658 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555200 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555437 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555611 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556863 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557115 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000246548 ENST00000500215 N/A 0.318±0.00 N/A 0.183±0.00 0.120±0.00 N/A 0.054±0.00 0.283±0.00 0.098±0.00 0.108±0.03 N/A 0.045±0.03 N/A 0.119±0.01
ENSG00000258473 ENST00000554043 N/A 0.069±0.00 N/A 0.046±0.00 0.022±0.00 N/A N/A N/A N/A 0.155±0.00 N/A N/A N/A 0.056±0.00
ENSG00000258819 ENST00000555512 N/A N/A N/A 0.127±0.00 N/A N/A N/A N/A 0.211±0.00 0.434±0.00 N/A N/A N/A N/A
ENST00000556781 N/A N/A N/A 0.185±0.00 N/A N/A 0.067±0.00 0.327±0.03 N/A 0.254±0.01 0.313±0.00 N/A N/A N/A
ENST00000557526 0.782±0.00 0.503±0.00 0.118±0.00 0.064±0.03 0.200±0.08 0.194±0.17 0.061±0.00 N/A N/A 0.215±0.14 N/A 0.063±0.02 N/A 0.243±0.13
ENSG00000273729 ENST00000619017 N/A 1.417±0.00 0.336±0.00 1.284±0.00 1.050±0.00 0.660±0.00 0.421±0.04 0.538±0.00 N/A 0.422±0.00 0.343±0.00 0.646±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000034157 ENSMUST00000038369 4.557±1.30 5.235±1.87 21.517±0.08 14.208±6.24 5.468±0.97 13.394±2.77 4.778±0.90 6.236±2.02 4.261±1.53 6.722±2.91 9.502±1.13 6.936±3.06 2.223±1.27 12.055±1.49
ENSMUST00000185434 2.314±0.41 N/A N/A N/A 2.659±1.29 N/A N/A N/A N/A 2.302±0.00 N/A N/A 1.396±0.00 N/A
ENSMUST00000185783 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000186499 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000187814 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000188046 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000188901 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000189246 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000190588 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000191032 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000191463 4.130±0.87 16.157±1.56 N/A N/A 6.752±0.73 22.674±2.71 4.519±0.00 4.564±1.30 5.843±1.13 5.328±1.77 N/A 12.033±3.33 1.688±0.02 7.864±0.36
ENSMUSG00000034168 ENSMUST00000038422 16.971±3.23 41.424±3.94 17.907±1.01 27.807±9.72 23.201±12.07 25.769±2.77 7.657±1.65 11.456±1.45 3.169±1.22 26.262±5.22 6.773±1.05 26.890±8.81 4.469±2.76 1.428±0.60
ENSMUSG00000097208 ENSMUST00000181290 0.138±0.06 0.180±0.05 0.139±0.06 0.043±0.00 0.273±0.14 0.318±0.12 0.104±0.00 0.327±0.05 0.130±0.08 0.239±0.08 0.102±0.07 0.309±0.15 0.101±0.12 0.054±0.01

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