C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003P4_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000119715-ENSG00000071246 CGP 9606 14:76310614-76783015
GeneTranscriptPositionBiotype
ENSG00000071246 (VASH1)
vasohibin 1 		ENST00000167106 (VASH1-001) 76762189-76783015 protein_coding
ENST00000553518 (VASH1-005) 76769953-76773913 processed_transcript
ENST00000554237 (VASH1-002) 76762329-76773650 protein_coding
ENST00000554743 (VASH1-003) 76778006-76779975 protein_coding
ENST00000556038 (VASH1-006) 76769881-76777999 processed_transcript
ENSG00000119715 (ESRRB)
estrogen-related receptor beta 		ENST00000380887 (ESRRB-003) 76404429-76501841 protein_coding
ENST00000505752 (ESRRB-001) 76371144-76500865 nonsense_mediated_decay
ENST00000507951 (ESRRB-005) 76376357-76482129 processed_transcript
ENST00000509242 (ESRRB-201) 76407402-76501835 protein_coding
ENST00000509323 (ESRRB-004) 76439642-76463427 processed_transcript
ENST00000512784 (ESRRB-002) 76310614-76500704 protein_coding
ENST00000556177 (ESRRB-006) 76407538-76498511 protein_coding
ENST00000611036 (ESRRB-007) 76499646-76501835 retained_intron
ENSG00000242952 (RP11-187O7.1)
 ENST00000464073 (RP11-187O7.1-001) 76634775-76635661 transcribed_processed_pseudogene
ENSG00000258301 (RP11-488C13.5)
 ENST00000554058 (RP11-488C13.5-002) 76782135-76786154 lincRNA
ENST00000556072 (RP11-488C13.5-001) 76781733-76786724 lincRNA
ENSG00000258569 (RP11-99E15.2)
 ENST00000556271 (RP11-99E15.2-001) 76710658-76761388 lincRNA
ENSG00000259124 (RP11-187O7.3)
 ENST00000554926 (RP11-187O7.3-001) 76495363-76726712 lincRNA
ENSG00000271423 (CYCSP1)
cytochrome c, somatic pseudogene 1 		ENST00000604815 (CYCSP1-001) 76633714-76634028 processed_pseudogene
CIL_0003P4_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000021255-ENSMUSG00000021256 CGP 10090 12:86361117-86692091
GeneTranscriptPositionBiotype
ENSMUSG00000021255 (Esrrb)
estrogen related receptor, beta 		ENSMUST00000021680 (Esrrb-006) 86421883-86519800 protein_coding
ENSMUST00000110203 (Esrrb-003) 86421644-86515522 protein_coding
ENSMUST00000110204 (Esrrb-002) 86421644-86521625 protein_coding
ENSMUST00000116402 (Esrrb-001) 86361117-86521628 protein_coding
ENSMUST00000136464 (Esrrb-004) 86504409-86509967 processed_transcript
ENSMUST00000167891 (Esrrb-005) 86470117-86519065 protein_coding
ENSMUSG00000021256 (Vash1)
vasohibin 1 		ENSMUST00000021681 (Vash1-001) 86678700-86692091 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003P4_0001ENSG00000071246ENST00000167106ENST00000553518ENST00000554237ENST00000554743ENST00000556038ENSG00000119715ENST00000380887ENST00000505752ENST00000507951ENST00000509242ENST00000509323ENST00000512784ENST00000556177ENST00000611036ENSG00000242952ENST00000464073ENSG00000258301ENST00000554058ENST00000556072ENSG00000258569ENST00000556271ENSG00000259124ENST00000554926ENSG00000271423ENST00000604815CIL_0003P4_0002ENSMUSG00000021255ENSMUST00000021680ENSMUST00000110203ENSMUST00000110204ENSMUST00000116402ENSMUST00000136464ENSMUST00000167891ENSMUSG00000021256ENSMUST00000021681
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003P4_0001ENSG00000071246ENST00000167106ENST00000554237ENST00000556038ENSG00000119715ENST00000380887ENST00000505752ENST00000507951ENST00000512784ENST00000556177ENST00000611036ENSG00000242952ENST00000464073ENSG00000258301ENST00000554058ENST00000556072ENSG00000258569ENST00000556271ENSG00000259124ENST00000554926ENSG00000271423ENST00000604815CIL_0003P4_0002ENSMUSG00000021255ENSMUST00000021680ENSMUST00000110203ENSMUST00000110204ENSMUST00000116402ENSMUST00000136464ENSMUST00000167891ENSMUSG00000021256ENSMUST00000021681
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000071246 ENST00000167106 3.402±0.00 2.310±0.00 0.315±0.00 2.788±1.99 3.164±2.19 1.648±0.00 1.657±1.31 0.763±0.62 0.732±0.20 1.746±0.85 N/A 3.597±2.72 8.827±4.61 3.988±0.79
ENST00000553518 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554237 N/A N/A 0.459±0.00 1.727±0.00 3.285±0.00 0.429±0.00 N/A N/A 2.185±0.00 N/A 0.203±0.00 N/A N/A N/A
ENST00000554743 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556038 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.095±0.00 N/A N/A
ENSG00000119715 ENST00000380887 N/A N/A N/A N/A 0.050±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505752 N/A N/A N/A N/A 0.115±0.00 N/A N/A 0.057±0.00 N/A N/A N/A N/A N/A 0.190±0.00
ENST00000507951 N/A N/A N/A N/A N/A 0.237±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509242 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509323 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512784 N/A 0.128±0.00 4.170±0.00 N/A N/A N/A N/A N/A 0.040±0.00 N/A N/A 0.104±0.00 0.053±0.00 0.522±0.00
ENST00000556177 0.055±0.00 N/A N/A 0.167±0.00 N/A N/A N/A N/A 0.036±0.00 N/A 1.300±0.42 0.032±0.01 N/A 0.645±0.00
ENST00000611036 0.122±0.00 0.196±0.00 1.497±0.00 0.032±0.02 0.133±0.06 N/A 1.596±0.00 4.408±0.00 N/A N/A 0.361±0.11 0.023±0.01 0.061±0.03 0.256±0.00
ENSG00000242952 ENST00000464073 0.036±0.00 0.113±0.00 N/A 0.041±0.00 0.098±0.00 0.107±0.00 0.034±0.00 0.171±0.00 0.050±0.00 0.071±0.00 0.064±0.00 0.183±0.00 0.278±0.00 0.034±0.00
ENSG00000258301 ENST00000554058 N/A N/A N/A N/A N/A N/A N/A N/A 1.901±0.00 N/A 0.716±0.00 N/A 11.597±0.00 N/A
ENST00000556072 N/A 5.536±0.00 N/A 6.508±0.00 6.639±0.00 5.556±0.00 0.338±0.00 5.612±4.83 6.510±0.00 N/A 0.661±0.38 6.006±3.61 9.752±3.88 N/A
ENSG00000258569 ENST00000556271 N/A N/A N/A 0.151±0.00 0.202±0.00 0.027±0.00 N/A N/A N/A N/A N/A N/A 0.118±0.00 0.296±0.00
ENSG00000259124 ENST00000554926 0.059±0.00 0.061±0.00 N/A 0.034±0.00 0.365±0.18 0.434±0.00 0.257±0.00 N/A 0.054±0.00 0.028±0.00 0.053±0.00 0.112±0.03 0.313±0.19 0.111±0.00
ENSG00000271423 ENST00000604815 N/A N/A N/A 0.122±0.00 0.059±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021255 ENSMUST00000021680 0.029±0.00 0.049±0.01 0.004±0.00 N/A N/A 0.018±0.00 N/A N/A N/A 0.024±0.00 0.472±0.00 0.256±0.03 N/A N/A
ENSMUST00000110203 N/A 0.096±0.02 N/A N/A 0.951±0.00 N/A N/A N/A 0.116±0.00 0.022±0.00 N/A N/A N/A N/A
ENSMUST00000110204 0.036±0.02 0.033±0.01 0.007±0.00 2.087±1.53 0.524±0.12 N/A 2.157±0.31 7.323±1.34 0.139±0.08 0.063±0.01 1.066±0.41 0.249±0.09 1.220±1.18 1.571±0.00
ENSMUST00000116402 0.016±0.00 N/A N/A N/A 0.204±0.03 0.067±0.04 4.504±0.47 1.203±0.43 0.042±0.00 0.150±0.01 0.500±0.34 0.375±0.12 0.773±0.00 N/A
ENSMUST00000136464 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.200±0.61 N/A N/A
ENSMUST00000167891 0.096±0.00 0.066±0.00 0.006±0.00 N/A N/A 0.190±0.06 N/A N/A 0.042±0.00 0.036±0.00 N/A 0.648±0.00 N/A 1.791±0.29
ENSMUSG00000021256 ENSMUST00000021681 2.195±0.97 1.803±0.49 N/A 14.641±1.32 1.826±1.68 1.141±0.27 1.517±0.27 0.439±0.27 0.282±0.06 3.017±0.21 0.897±0.00 4.643±1.95 0.413±0.07 0.860±0.26

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