C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003P6_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000106038-ENSG00000106049 CGP 9606 7:27242700-27662995
GeneTranscriptPositionBiotype
ENSG00000106038 (EVX1)
even-skipped homeobox 1 		ENST00000222761 (EVX1-003) 27242700-27246425 protein_coding
ENST00000496902 (EVX1-001) 27242700-27246573 protein_coding
ENST00000580535 (EVX1-004) 27243368-27247176 protein_coding
ENSG00000106049 (HIBADH)
3-hydroxyisobutyrate dehydrogenase 		ENST00000265395 (HIBADH-001) 27525442-27662995 protein_coding
ENST00000425715 (HIBADH-005) 27531254-27647756 protein_coding
ENST00000428288 (HIBADH-003) 27525475-27662868 nonsense_mediated_decay
ENST00000496814 (HIBADH-004) 27649224-27662857 retained_intron
ENSG00000213781 (PSMC1P2)
proteasome (prosome, macropain) 26S subunit, ATPase, 1 pseudogene 2 		ENST00000423961 (PSMC1P2-001) 27461766-27462969 processed_pseudogene
ENSG00000213783 (RPL35P4)
ribosomal protein L35 pseudogene 4 		ENST00000446039 (RPL35P4-001) 27269357-27269678 processed_pseudogene
ENSG00000224322 (AC004009.3)
 ENST00000412413 (AC004009.3-001) 27361843-27409938 lincRNA
ENSG00000233830 (EIF4HP1)
eukaryotic translation initiation factor 4H pseudogene 1 		ENST00000453115 (EIF4HP1-001) 27458163-27458849 processed_pseudogene
ENSG00000235574 (AC073150.6)
 ENST00000450406 (AC073150.6-001) 27491682-27492765 processed_pseudogene
ENSG00000236569 (HNRNPA1P73)
heterogeneous nuclear ribonucleoprotein A1 pseudogene 73 		ENST00000446472 (HNRNPA1P73-001) 27328607-27329534 processed_pseudogene
ENSG00000253405 (EVX1-AS)
EVX1 antisense RNA 		ENST00000517726 (EVX1-AS-001) 27241429-27247229 antisense
ENST00000519050 (EVX1-AS-003) 27241930-27242962 antisense
ENST00000519218 (EVX1-AS-002) 27241950-27243959 antisense
ENSG00000274981 (RP1-170O19.25)
 ENST00000518886 (RP1-170O19.25-001) 27247368-27250493 lincRNA
ENSG00000279429 (AC004009.2)
 ENST00000623016 (AC004009.2-001) 27412164-27412891 TEC
ENSG00000279655 (AC004009.1)
 ENST00000624160 (AC004009.1-001) 27380562-27381206 TEC
CIL_0003P6_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000005503-ENSMUSG00000029776 CGP 10090 6:52313498-52640389
GeneTranscriptPositionBiotype
ENSMUSG00000005503 (Evx1)
even skipped homeotic gene 1 homolog 		ENSMUST00000031787 (Evx1-001) 52313498-52318378 protein_coding
ENSMUST00000129243 (Evx1-002) 52313552-52316644 protein_coding
ENSMUSG00000029776 (Hibadh)
3-hydroxyisobutyrate dehydrogenase 		ENSMUST00000031788 (Hibadh-001) 52546228-52640389 protein_coding
ENSMUST00000149471 (Hibadh-002) 52548852-52556915 retained_intron
ENSMUST00000155948 (Hibadh-003) 52546696-52630258 retained_intron
ENSMUSG00000059159 (Gm8129)
predicted pseudogene 8129 		ENSMUST00000118230 (Gm8129-001) 52346730-52346942 processed_pseudogene
ENSMUSG00000064792 (Gm24355)
predicted gene, 24355 		ENSMUST00000082858 (Gm24355-201) 52639234-52639355 snoRNA
ENSMUSG00000086126 (5730457N03Rik)
RIKEN cDNA 5730457N03 gene 		ENSMUST00000125305 (5730457N03Rik-001) 52308389-52314832 antisense
ENSMUST00000137258 (5730457N03Rik-002) 52310836-52313505 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003P6_0001ENSG00000106038ENST00000222761ENST00000496902ENST00000580535ENSG00000106049ENST00000265395ENST00000425715ENST00000428288ENST00000496814ENSG00000213781ENST00000423961ENSG00000213783ENST00000446039ENSG00000224322ENST00000412413ENSG00000233830ENST00000453115ENSG00000235574ENST00000450406ENSG00000236569ENST00000446472ENSG00000253405ENST00000517726ENST00000519050ENST00000519218ENSG00000274981ENST00000518886ENSG00000279429ENST00000623016ENSG00000279655ENST00000624160CIL_0003P6_0002ENSMUSG00000005503ENSMUST00000031787ENSMUST00000129243ENSMUSG00000029776ENSMUST00000031788ENSMUST00000149471ENSMUST00000155948ENSMUSG00000059159ENSMUST00000118230ENSMUSG00000064792ENSMUST00000082858ENSMUSG00000086126ENSMUST00000125305ENSMUST00000137258
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003P6_0001ENSG00000106038ENST00000222761ENST00000496902ENST00000580535ENSG00000106049ENST00000265395ENST00000425715ENST00000428288ENSG00000213781ENST00000423961ENSG00000213783ENST00000446039ENSG00000224322ENST00000412413ENSG00000233830ENST00000453115ENSG00000235574ENST00000450406ENSG00000236569ENST00000446472ENSG00000253405ENST00000517726ENST00000519050ENST00000519218ENSG00000274981ENST00000518886ENSG00000279429ENST00000623016ENSG00000279655ENST00000624160CIL_0003P6_0002ENSMUSG00000005503ENSMUST00000031787ENSMUST00000129243ENSMUSG00000029776ENSMUST00000031788ENSMUST00000155948ENSMUSG00000059159ENSMUST00000118230ENSMUSG00000064792ENSMUST00000082858ENSMUSG00000086126ENSMUST00000125305ENSMUST00000137258
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000106038 ENST00000222761 N/A N/A N/A N/A N/A N/A N/A 0.079±0.00 N/A N/A N/A 0.112±0.03 N/A N/A
ENST00000496902 N/A N/A N/A N/A 0.105±0.00 N/A N/A N/A 0.048±0.00 N/A N/A N/A N/A N/A
ENST00000580535 N/A 0.042±0.00 N/A N/A N/A N/A N/A N/A 0.114±0.00 N/A N/A 0.138±0.10 0.084±0.02 0.778±0.00
ENSG00000106049 ENST00000265395 14.394±0.00 6.523±0.00 5.176±0.00 3.835±2.63 14.579±10.17 9.215±5.45 14.398±10.08 14.947±2.87 9.855±7.21 4.394±2.93 9.756±5.91 9.338±8.35 12.409±3.69 9.882±3.49
ENST00000425715 N/A N/A N/A N/A 3.101±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 5.062±0.00
ENST00000428288 8.910±0.00 5.779±0.00 N/A 1.844±0.00 9.010±8.02 8.622±0.00 14.111±0.00 28.596±0.00 15.647±0.00 4.245±0.00 12.619±0.00 9.260±1.91 14.734±6.91 8.366±1.71
ENST00000496814 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000213781 ENST00000423961 0.054±0.00 0.085±0.00 N/A 0.036±0.00 0.045±0.00 0.034±0.00 0.025±0.00 0.046±0.00 N/A N/A 0.098±0.00 0.083±0.10 N/A 0.115±0.00
ENSG00000213783 ENST00000446039 0.065±0.00 0.213±0.00 N/A 0.076±0.00 0.075±0.00 0.206±0.00 N/A N/A 0.131±0.00 0.074±0.00 0.255±0.00 N/A N/A 0.127±0.00
ENSG00000224322 ENST00000412413 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.441±0.00
ENSG00000233830 ENST00000453115 0.134±0.00 N/A N/A 0.200±0.11 0.066±0.01 0.204±0.00 0.523±0.00 0.103±0.07 0.056±0.03 0.133±0.10 0.128±0.00 0.110±0.05 N/A 0.147±0.00
ENSG00000235574 ENST00000450406 N/A N/A 0.104±0.00 N/A N/A N/A N/A N/A 0.072±0.00 N/A N/A 0.096±0.02 N/A 0.206±0.11
ENSG00000236569 ENST00000446472 0.014±0.00 0.015±0.00 N/A 0.031±0.00 0.015±0.00 0.027±0.00 N/A 0.030±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000253405 ENST00000517726 N/A N/A N/A N/A N/A N/A N/A 0.138±0.00 N/A N/A N/A 0.150±0.04 N/A N/A
ENST00000519050 N/A N/A N/A N/A N/A N/A N/A N/A 0.178±0.00 N/A N/A 0.119±0.00 N/A 0.408±0.00
ENST00000519218 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.196±0.09 0.109±0.00 0.922±0.00
ENSG00000274981 ENST00000518886 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.706±0.00
ENSG00000279429 ENST00000623016 0.031±0.00 0.183±0.00 N/A N/A N/A 0.014±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000279655 ENST00000624160 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.748±1.33
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000005503 ENSMUST00000031787 N/A N/A 0.297±0.02 0.686±0.31 N/A 1.052±0.34 N/A 0.013±0.00 0.009±0.00 0.033±0.00 N/A 0.954±0.34 0.098±0.05 0.045±0.01
ENSMUST00000129243 N/A N/A N/A N/A N/A N/A N/A N/A 0.034±0.00 N/A N/A N/A 0.054±0.00 N/A
ENSMUSG00000029776 ENSMUST00000031788 62.354±26.52 58.020±1.44 44.194±1.04 9.683±1.22 55.524±11.76 23.743±1.60 79.262±17.64 171.050±13.17 102.440±71.71 25.888±0.44 61.453±5.32 28.990±10.35 25.870±6.03 10.383±4.54
ENSMUST00000149471 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155948 N/A N/A N/A 6.557±0.00 N/A N/A N/A N/A N/A N/A N/A 13.513±0.00 10.834±0.00 6.646±0.00
ENSMUSG00000059159 ENSMUST00000118230 N/A N/A 0.582±0.00 36.736±0.00 N/A N/A N/A N/A 22.232±37.56 N/A N/A N/A 0.290±0.10 N/A
ENSMUSG00000064792 ENSMUST00000082858 N/A N/A N/A N/A N/A N/A N/A N/A 31.159±0.00 N/A N/A N/A N/A N/A
ENSMUSG00000086126 ENSMUST00000125305 0.011±0.00 N/A 0.214±0.03 0.247±0.25 N/A N/A N/A N/A 0.053±0.00 N/A N/A N/A 0.059±0.05 0.046±0.02
ENSMUST00000137258 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.248±0.00

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