C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003PQ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000156030-ENSG00000140043 CGP 9606 14:73715122-73886827
GeneTranscriptPositionBiotype
ENSG00000156030 (ELMSAN1)
ELM2 and Myb/SANT-like domain containing 1 		ENST00000286523 (ELMSAN1-201) 73715131-73760298 protein_coding
ENST00000394071 (ELMSAN1-001) 73715122-73787258 protein_coding
ENST00000421708 (ELMSAN1-008) 73739812-73755016 protein_coding
ENST00000423556 (ELMSAN1-003) 73718907-73740255 protein_coding
ENST00000435371 (ELMSAN1-002) 73719383-73760298 protein_coding
ENST00000451078 (ELMSAN1-004) 73719382-73739474 nonsense_mediated_decay
ENST00000462716 (ELMSAN1-005) 73723162-73729176 retained_intron
ENST00000476562 (ELMSAN1-006) 73715124-73727133 retained_intron
ENST00000478847 (ELMSAN1-010) 73719370-73721624 retained_intron
ENST00000483269 (ELMSAN1-009) 73722366-73725339 retained_intron
ENST00000486739 (ELMSAN1-007) 73740031-73790285 processed_transcript
ENSG00000258586 (RP5-1021I20.2)
 ENST00000555539 (RP5-1021I20.2-001) 73822559-73830135 lincRNA
ENSG00000259065 (RP5-1021I20.1)
 ENST00000553470 (RP5-1021I20.1-002) 73788965-73803270 antisense
ENST00000556194 (RP5-1021I20.1-001) 73787360-73803217 antisense
ENSG00000264741 (MIR4505)
microRNA 4505 		ENST00000582238 (MIR4505-201) 73758747-73758819 miRNA

Homo sapiens Ensembl (GRCh38)

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CIL_0003PQ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000042507-ENSMUSG00000072946 CGP 10090 12:84149176-84315832
GeneTranscriptPositionBiotype
ENSMUSG00000042507 (Elmsan1)
ELM2 and Myb/SANT-like domain containing 1 		ENSMUST00000046266 (Elmsan1-201) 84149176-84218881 protein_coding
ENSMUST00000110294 (Elmsan1-001) 84149278-84194015 protein_coding
ENSMUST00000130038 (Elmsan1-002) 84156528-84160138 processed_transcript
ENSMUST00000137562 (Elmsan1-003) 84152945-84155232 processed_transcript
ENSMUSG00000042962 (Gm5436)
predicted pseudogene 5436 		ENSMUST00000058103 (Gm5436-201) 84258332-84258973 processed_pseudogene
ENSMUSG00000072946 (Ptgr2)
prostaglandin reductase 2 		ENSMUST00000123614 (Ptgr2-001) 84285232-84315832 protein_coding
ENSMUST00000123693 (Ptgr2-003) 84285413-84314102 nonsense_mediated_decay
ENSMUST00000128158 (Ptgr2-007) 84285381-84298366 retained_intron
ENSMUST00000128541 (Ptgr2-008) 84285384-84308432 processed_transcript
ENSMUST00000135001 (Ptgr2-002) 84285400-84314102 protein_coding
ENSMUST00000138733 (Ptgr2-004) 84285365-84304023 retained_intron
ENSMUST00000146377 (Ptgr2-006) 84285406-84314854 protein_coding
ENSMUST00000147363 (Ptgr2-005) 84285374-84309953 protein_coding
ENSMUST00000150720 (Ptgr2-009) 84285399-84306079 processed_transcript

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003PQ_0001ENSG00000156030ENST00000286523ENST00000394071ENST00000421708ENST00000423556ENST00000435371ENST00000451078ENST00000462716ENST00000476562ENST00000478847ENST00000483269ENST00000486739ENSG00000258586ENST00000555539ENSG00000259065ENST00000553470ENST00000556194ENSG00000264741ENST00000582238CIL_0003PQ_0002ENSMUSG00000042507ENSMUST00000046266ENSMUST00000110294ENSMUST00000130038ENSMUST00000137562ENSMUSG00000042962ENSMUST00000058103ENSMUSG00000072946ENSMUST00000123614ENSMUST00000123693ENSMUST00000128158ENSMUST00000128541ENSMUST00000135001ENSMUST00000138733ENSMUST00000146377ENSMUST00000147363ENSMUST00000150720
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003PQ_0001ENSG00000156030ENST00000286523ENST00000394071ENST00000423556ENST00000435371ENST00000451078ENST00000462716ENST00000476562ENSG00000258586ENST00000555539ENSG00000259065ENST00000553470ENST00000556194ENSG00000264741ENST00000582238CIL_0003PQ_0002ENSMUSG00000042507ENSMUST00000046266ENSMUST00000110294ENSMUSG00000042962ENSMUST00000058103ENSMUSG00000072946ENSMUST00000123614ENSMUST00000123693ENSMUST00000135001ENSMUST00000146377ENSMUST00000150720
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000156030 ENST00000286523 N/A N/A 1.134±0.00 1.566±0.30 0.916±0.00 2.466±0.00 0.498±0.00 N/A 0.784±0.18 1.359±0.00 N/A 6.671±0.00 2.088±0.00 1.095±0.00
ENST00000394071 N/A 2.112±0.00 N/A 1.508±0.00 1.233±0.70 N/A 0.651±0.00 1.289±0.00 N/A N/A N/A 0.949±0.42 1.954±0.99 2.376±0.95
ENST00000421708 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000423556 N/A N/A N/A N/A 1.503±0.00 N/A N/A 0.948±0.00 N/A N/A 1.047±0.00 N/A N/A N/A
ENST00000435371 N/A N/A N/A N/A N/A N/A N/A N/A 1.310±0.00 N/A 0.536±0.00 1.269±0.00 N/A N/A
ENST00000451078 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.839±0.00 N/A N/A
ENST00000462716 N/A N/A 0.760±0.00 N/A 0.747±0.00 0.801±0.00 N/A N/A 0.876±0.00 0.815±0.00 N/A 0.867±0.00 N/A N/A
ENST00000476562 N/A N/A N/A N/A N/A N/A 0.554±0.00 1.206±0.00 N/A 1.573±0.00 1.215±0.00 6.280±0.00 0.522±0.00 6.646±0.00
ENST00000478847 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483269 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486739 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000258586 ENST00000555539 0.093±0.00 0.031±0.00 N/A 0.074±0.00 0.049±0.00 0.116±0.00 0.014±0.00 2.499±0.00 0.033±0.00 N/A N/A 0.027±0.01 0.012±0.00 0.026±0.02
ENSG00000259065 ENST00000553470 0.553±0.00 0.942±0.00 N/A 0.889±0.00 N/A 1.710±0.00 1.493±0.85 0.429±0.00 1.434±0.00 N/A 1.673±1.44 1.388±0.70 0.866±0.52 0.613±0.00
ENST00000556194 1.123±0.00 0.179±0.00 N/A 0.152±0.02 4.347±0.00 2.488±0.00 1.274±1.13 N/A N/A 1.260±0.00 1.335±0.00 0.368±0.27 1.055±0.74 1.431±0.74
ENSG00000264741 ENST00000582238 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.849±0.00 N/A 1.221±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000042507 ENSMUST00000046266 5.260±0.43 5.637±0.84 4.435±1.36 0.947±0.00 5.864±2.71 5.422±0.97 2.269±0.42 1.727±0.50 1.749±0.65 9.642±1.07 1.361±0.63 3.947±0.81 5.543±2.89 N/A
ENSMUST00000110294 1.589±0.55 1.832±0.46 N/A 1.919±0.01 3.144±1.17 2.683±0.84 0.511±0.17 0.888±0.14 1.062±0.72 3.035±0.27 0.835±0.36 1.538±0.64 2.093±0.93 0.135±0.06
ENSMUST00000130038 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137562 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000042962 ENSMUST00000058103 1.167±0.18 N/A 0.012±0.00 3.792±0.00 0.452±0.30 0.133±0.05 1.881±0.84 0.433±0.12 0.016±0.00 0.334±0.13 N/A 0.615±0.19 1.858±0.00 0.979±0.24
ENSMUSG00000072946 ENSMUST00000123614 16.199±3.91 7.421±0.56 13.365±0.17 5.594±3.49 6.433±3.09 4.991±0.94 26.826±2.20 19.504±2.92 9.926±2.87 8.436±1.37 15.416±2.34 5.231±3.89 7.322±1.53 2.234±0.95
ENSMUST00000123693 N/A N/A N/A N/A N/A 1.650±0.00 N/A N/A N/A N/A N/A 1.793±0.09 4.065±0.00 N/A
ENSMUST00000128158 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000128541 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135001 N/A 9.874±0.23 N/A N/A 5.696±1.47 4.241±0.16 16.246±2.28 9.710±2.05 5.632±1.01 N/A N/A 3.384±1.44 5.202±0.47 4.161±0.46
ENSMUST00000138733 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146377 N/A 1.477±0.00 N/A N/A N/A N/A N/A N/A 1.698±0.00 N/A 4.983±0.36 2.124±0.00 2.121±0.00 N/A
ENSMUST00000147363 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150720 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 21.884±0.00 19.218±5.58 24.742±0.00

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