C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003QD_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000100146-ENSG00000100151 CGP 9606 22:37970686-38075701
GeneTranscriptPositionBiotype
ENSG00000100151 (PICK1)
protein interacting with PRKCA 1 		ENST00000356976 (PICK1-002) 38057407-38075701 protein_coding
ENST00000404072 (PICK1-001) 38057200-38075701 protein_coding
ENST00000424694 (PICK1-005) 38057228-38072608 protein_coding
ENST00000426258 (PICK1-013) 38057404-38070891 nonsense_mediated_decay
ENST00000432756 (PICK1-010) 38057656-38071728 nonsense_mediated_decay
ENST00000435166 (PICK1-009) 38057653-38069085 protein_coding
ENST00000437453 (PICK1-016) 38057395-38068114 protein_coding
ENST00000445628 (PICK1-004) 38056311-38059306 protein_coding
ENST00000466374 (PICK1-012) 38057483-38068085 retained_intron
ENST00000468288 (PICK1-007) 38057404-38070891 processed_transcript
ENST00000469819 (PICK1-011) 38057407-38065226 retained_intron
ENST00000472724 (PICK1-015) 38065113-38072007 retained_intron
ENST00000476157 (PICK1-006) 38057404-38058158 retained_intron
ENST00000484021 (PICK1-003) 38057255-38075693 retained_intron
ENST00000494434 (PICK1-014) 38067477-38072534 retained_intron
ENSG00000222044 (RP5-1039K5.16)
 ENST00000410099 (RP5-1039K5.16-001) 38032165-38034228 antisense
ENSG00000273214 (RP5-1039K5.18)
 ENST00000609265 (RP5-1039K5.18-001) 38043230-38043920 lincRNA
ENSG00000279010 (MIR4534)
microRNA 6820 		ENST00000623111 (MIR4534-001) 37948352-38002889 sense_overlapping

Homo sapiens Ensembl (GRCh38)

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CIL_0003QD_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000033006-ENSMUSG00000068206 CGP 10090 15:79154913-79256674
GeneTranscriptPositionBiotype
ENSMUSG00000032988 (Slc16a8)
solute carrier family 16 (monocarboxylic acid transporters), member 8 		ENSMUST00000039752 (Slc16a8-001) 79251014-79254761 protein_coding
ENSMUSG00000033006 (Sox10)
SRY (sex determining region Y)-box 10 		ENSMUST00000040019 (Sox10-201) 79154913-79164490 protein_coding
ENSMUSG00000068206 (Pick1)
protein interacting with C kinase 1 		ENSMUST00000018295 (Pick1-001) 79229382-79249466 protein_coding
ENSMUST00000053926 (Pick1-003) 79229391-79256674 protein_coding
ENSMUST00000113954 (Pick1-011) 79245274-79247734 processed_transcript
ENSMUST00000163571 (Pick1-002) 79229173-79249484 protein_coding
ENSMUST00000165609 (Pick1-004) 79229411-79247963 retained_intron
ENSMUST00000166155 (Pick1-012) 79229702-79249329 protein_coding
ENSMUST00000166417 (Pick1-006) 79229458-79234346 processed_transcript
ENSMUST00000168513 (Pick1-010) 79242964-79247632 processed_transcript
ENSMUST00000169548 (Pick1-005) 79229416-79247963 retained_intron
ENSMUST00000171365 (Pick1-009) 79229505-79241384 retained_intron
ENSMUST00000171581 (Pick1-008) 79246335-79249466 processed_transcript
ENSMUST00000172162 (Pick1-007) 79244877-79247600 processed_transcript
ENSMUSG00000075555 (Gm10863)
predicted gene 10863 		ENSMUST00000130745 (Gm10863-003) 79166058-79216168 antisense
ENSMUST00000131710 (Gm10863-004) 79166041-79216383 antisense
ENSMUST00000144651 (Gm10863-001) 79166066-79227524 antisense
ENSMUST00000147620 (Gm10863-002) 79166066-79216497 antisense
ENSMUST00000148028 (Gm10863-005) 79209311-79217383 antisense

Mus musculus Ensembl (GRCm38)

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Structures from Ensembl
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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003QD_0001ENSG00000100151ENST00000356976ENST00000404072ENST00000424694ENST00000426258ENST00000432756ENST00000435166ENST00000437453ENST00000445628ENST00000466374ENST00000468288ENST00000469819ENST00000472724ENST00000476157ENST00000484021ENST00000494434ENSG00000222044ENST00000410099ENSG00000273214ENST00000609265ENSG00000279010ENST00000623111CIL_0003QD_0002ENSMUSG00000032988ENSMUST00000039752ENSMUSG00000033006ENSMUST00000040019ENSMUSG00000068206ENSMUST00000018295ENSMUST00000053926ENSMUST00000113954ENSMUST00000163571ENSMUST00000165609ENSMUST00000166155ENSMUST00000166417ENSMUST00000168513ENSMUST00000169548ENSMUST00000171365ENSMUST00000171581ENSMUST00000172162ENSMUSG00000075555ENSMUST00000130745ENSMUST00000131710ENSMUST00000144651ENSMUST00000147620ENSMUST00000148028
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003QD_0001ENSG00000100151ENST00000356976ENST00000404072ENST00000424694ENST00000426258ENST00000437453ENST00000466374ENST00000469819ENST00000472724ENST00000484021ENST00000494434ENSG00000222044ENST00000410099ENSG00000273214ENST00000609265ENSG00000279010ENST00000623111CIL_0003QD_0002ENSMUSG00000032988ENSMUST00000039752ENSMUSG00000033006ENSMUST00000040019ENSMUSG00000068206ENSMUST00000018295ENSMUST00000163571ENSMUST00000165609ENSMUST00000166155ENSMUST00000168513ENSMUST00000169548ENSMUST00000171365ENSMUST00000171581ENSMUSG00000075555ENSMUST00000130745ENSMUST00000131710ENSMUST00000144651ENSMUST00000147620ENSMUST00000148028
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000100151 ENST00000356976 2.253±0.00 3.942±0.00 0.100±0.00 7.999±6.52 5.208±0.00 1.423±0.65 6.278±0.00 9.760±0.00 4.893±0.00 3.785±0.00 7.221±0.00 5.137±2.67 9.818±3.43 10.454±5.71
ENST00000404072 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.662±0.00 N/A
ENST00000424694 N/A N/A N/A N/A N/A N/A N/A N/A 0.748±0.00 N/A N/A N/A N/A N/A
ENST00000426258 N/A N/A N/A N/A 1.210±0.00 N/A N/A N/A N/A N/A N/A 1.277±0.00 N/A N/A
ENST00000432756 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000435166 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000437453 N/A N/A N/A N/A N/A N/A N/A N/A 1.628±0.00 N/A N/A 2.004±0.00 N/A N/A
ENST00000445628 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466374 N/A N/A 0.596±0.00 N/A N/A N/A N/A N/A N/A 1.124±0.00 N/A 1.120±0.00 N/A N/A
ENST00000468288 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000469819 N/A N/A 0.578±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472724 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.864±0.00 N/A N/A N/A N/A
ENST00000476157 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484021 N/A N/A N/A 1.352±0.00 N/A N/A 1.081±0.00 0.735±0.66 N/A N/A N/A 5.360±2.24 N/A 4.659±1.41
ENST00000494434 N/A N/A 1.755±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000222044 ENST00000410099 0.037±0.00 0.372±0.00 N/A 0.376±0.00 0.191±0.00 0.132±0.00 0.221±0.00 0.142±0.00 0.018±0.00 0.137±0.00 0.051±0.00 0.091±0.04 N/A 0.204±0.19
ENSG00000273214 ENST00000609265 N/A 0.027±0.00 N/A 0.831±0.00 0.417±0.27 N/A N/A N/A N/A N/A N/A 0.068±0.00 0.083±0.00 N/A
ENSG00000279010 ENST00000623111 0.471±0.00 0.657±0.00 0.058±0.00 1.094±0.00 0.339±0.23 0.270±0.13 0.119±0.06 0.363±0.00 0.201±0.09 0.139±0.05 0.126±0.00 0.206±0.13 N/A 0.549±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000032988 ENSMUST00000039752 0.201±0.00 0.133±0.05 0.324±0.01 0.611±0.11 0.283±0.08 0.263±0.09 0.179±0.00 0.073±0.05 0.039±0.02 N/A 0.330±0.14 0.259±0.13 0.186±0.11 0.069±0.04
ENSMUSG00000033006 ENSMUST00000040019 0.632±0.11 1.519±0.33 5.085±0.69 5.000±3.72 18.173±3.73 3.255±0.51 1.100±0.34 0.356±0.09 0.164±0.24 0.614±0.09 0.597±0.27 0.295±0.20 0.031±0.00 0.481±0.18
ENSMUSG00000068206 ENSMUST00000018295 8.149±1.06 8.167±1.03 7.188±1.01 17.270±5.31 6.828±0.90 18.800±2.84 4.654±1.23 8.886±1.28 6.272±1.41 8.382±0.55 15.574±1.06 11.246±1.95 6.186±2.58 28.265±12.20
ENSMUST00000053926 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000113954 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000163571 N/A N/A N/A 5.555±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 1.543±0.00 2.699±0.00
ENSMUST00000165609 N/A N/A N/A N/A 1.608±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000166155 N/A N/A 6.259±0.22 8.030±0.00 N/A N/A 5.198±0.95 3.098±0.23 3.158±1.10 N/A N/A 7.340±0.91 3.669±0.61 11.388±2.15
ENSMUST00000166417 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000168513 N/A N/A N/A 25.552±0.00 N/A N/A N/A N/A N/A N/A N/A 16.634±0.00 8.374±0.05 11.149±0.00
ENSMUST00000169548 N/A N/A N/A N/A N/A N/A N/A N/A 1.457±0.03 N/A N/A 2.725±0.62 1.154±0.00 N/A
ENSMUST00000171365 N/A N/A N/A 20.388±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 6.251±0.32 14.958±0.00
ENSMUST00000171581 3.970±1.08 N/A 6.182±0.46 16.117±1.89 4.054±1.18 9.437±1.82 3.700±0.47 4.557±0.45 3.802±1.48 4.860±0.81 4.836±0.56 6.044±1.71 3.602±0.54 5.832±0.00
ENSMUST00000172162 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000075555 ENSMUST00000130745 N/A N/A N/A N/A N/A 0.340±0.03 0.144±0.04 N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131710 N/A 0.249±0.10 N/A 0.334±0.00 1.257±0.00 0.374±0.15 0.229±0.14 N/A N/A N/A 0.100±0.00 0.090±0.00 N/A N/A
ENSMUST00000144651 N/A 0.299±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147620 N/A 0.338±0.17 N/A 0.324±0.00 N/A 0.441±0.32 0.209±0.16 0.188±0.00 0.150±0.08 0.362±0.00 0.207±0.00 0.520±0.30 0.156±0.00 0.649±0.22
ENSMUST00000148028 0.099±0.00 0.272±0.06 0.312±0.00 1.008±0.86 0.878±0.17 0.387±0.16 0.108±0.02 0.331±0.22 0.153±0.05 0.536±0.00 0.109±0.03 0.355±0.22 0.140±0.12 0.620±0.46

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