C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0003QM_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000061248-ENSDARG00000010160 CGP 7955 3:26492909-26672111
GeneTranscriptPositionBiotype
ENSDARG00000010160 (rps15a)
ribosomal protein S15a
ENSDART00000018822 (rps15a-002) 26666380-26668188 retained_intron
ENSDART00000128613 (rps15a-001) 26666187-26672111 protein_coding
ENSDARG00000061248 (xylt1)
xylosyltransferase I
ENSDART00000087118 (xylt1-001) 26492909-26599392 protein_coding
CIL_0003QM_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000030657-ENSMUSG00000008683 CGP 10090 7:117380979-118116186
GeneTranscriptPositionBiotype
ENSMUSG00000008683 (Rps15a)
ribosomal protein S15A
ENSMUST00000106588 (Rps15a-004) 118109064-118115677 protein_coding
ENSMUST00000106590 (Rps15a-005) 118109169-118115554 protein_coding
ENSMUST00000128482 (Rps15a-003) 118114785-118116128 protein_coding
ENSMUST00000131374 (Rps15a-001) 118105828-118116186 protein_coding
ENSMUST00000131840 (Rps15a-002) 118114789-118116129 protein_coding
ENSMUST00000134270 (Rps15a-006) 118109663-118115228 retained_intron
ENSMUST00000172457 (Rps15a-201) 118104378-118115256 protein_coding
ENSMUSG00000030657 (Xylt1)
xylosyltransferase 1
ENSMUST00000032892 (Xylt1-001) 117380979-117667751 protein_coding
ENSMUST00000160035 (Xylt1-002) 117380979-117635185 retained_intron
ENSMUST00000161889 (Xylt1-003) 117475492-117549359 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003QM_0001ENSDARG00000010160ENSDART00000018822ENSDART00000128613ENSDARG00000061248ENSDART00000087118CIL_0003QM_0002ENSMUSG00000008683ENSMUST00000106588ENSMUST00000106590ENSMUST00000128482ENSMUST00000131374ENSMUST00000131840ENSMUST00000134270ENSMUST00000172457ENSMUSG00000030657ENSMUST00000032892ENSMUST00000160035ENSMUST00000161889
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003QM_0001ENSDARG00000010160ENSDART00000018822ENSDART00000128613ENSDARG00000061248ENSDART00000087118CIL_0003QM_0002ENSMUSG00000008683ENSMUST00000106588ENSMUST00000128482ENSMUST00000131374ENSMUST00000131840ENSMUST00000172457ENSMUSG00000030657ENSMUST00000032892ENSMUST00000160035ENSMUST00000161889
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000010160 ENSDART00000018822 N/A N/A N/A N/A N/A N/A 0.338±0.00 0.692±0.46 N/A N/A N/A N/A N/A N/A
ENSDART00000128613 N/A N/A N/A 95.297±92.06 N/A N/A 488.846±499.90 346.212±484.88 418.285±0.00 N/A 429.841±0.00 N/A N/A N/A
ENSDARG00000061248 ENSDART00000087118 N/A N/A N/A N/A N/A N/A 0.526±0.27 N/A 0.010±0.00 N/A 0.784±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000008683 ENSMUST00000106588 47.017±17.44 N/A 224.765±89.48 115.572±43.24 68.948±28.57 30.724±8.12 30.774±8.55 46.108±10.26 173.463±204.13 48.242±9.32 117.932±23.53 581.051±72.26 406.321±258.96 56.677±8.58
ENSMUST00000106590 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000128482 755.878±401.81 64.079±10.73 1532.980±677.90 1108.215±7.11 911.207±0.00 471.537±75.33 294.070±79.55 520.252±141.77 806.807±810.70 520.772±25.95 169.684±49.89 1567.375±1084.39 1574.870±709.53 719.184±61.74
ENSMUST00000131374 28.068±0.00 4.533±0.95 29.399±0.00 18.641±0.00 N/A 13.718±2.73 7.884±0.00 11.741±1.70 20.733±20.63 14.994±0.46 5.676±1.02 37.616±0.00 42.637±0.00 11.408±0.00
ENSMUST00000131840 N/A 2.985±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134270 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000172457 N/A N/A N/A 9.553±1.74 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000030657 ENSMUST00000032892 0.474±0.07 1.835±0.46 N/A N/A 2.224±1.15 2.577±1.15 0.456±0.12 1.721±0.79 0.054±0.02 1.096±0.42 0.693±0.22 2.615±0.73 N/A 0.488±0.23
ENSMUST00000160035 N/A N/A N/A 4.554±0.00 N/A N/A 0.124±0.01 N/A 0.046±0.02 N/A N/A 0.722±0.26 2.336±0.00 0.073±0.00
ENSMUST00000161889 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.393±0.00 0.352±0.00

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