C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003QW_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000004866-ENSG00000105989 CGP 9606 7:116953238-117323289
GeneTranscriptPositionBiotype
ENSG00000004866 (ST7)
suppression of tumorigenicity 7 		ENST00000265437 (ST7-002) 116953327-117223907 protein_coding
ENST00000323984 (ST7-001) 116953379-117230103 protein_coding
ENST00000393443 (ST7-004) 117020218-117230103 protein_coding
ENST00000393444 (ST7-006) 117020277-117230103 protein_coding
ENST00000393446 (ST7-013) 116953238-117230096 protein_coding
ENST00000393447 (ST7-005) 117020277-117230103 protein_coding
ENST00000393449 (ST7-014) 116953379-117230103 protein_coding
ENST00000393451 (ST7-007) 116953342-117230103 protein_coding
ENST00000417919 (ST7-027) 116953503-117119662 protein_coding
ENST00000420755 (ST7-029) 117076524-117131891 protein_coding
ENST00000421345 (ST7-028) 116954391-117119719 protein_coding
ENST00000422922 (ST7-012) 117014888-117230103 protein_coding
ENST00000432298 (ST7-016) 117014888-117230103 protein_coding
ENST00000434836 (ST7-023) 117020218-117099839 protein_coding
ENST00000438863 (ST7-015) 116953347-117138532 nonsense_mediated_decay
ENST00000443979 (ST7-021) 116953467-117221967 nonsense_mediated_decay
ENST00000446490 (ST7-026) 116953521-117230099 protein_coding
ENST00000449366 (ST7-019) 117014936-117129809 protein_coding
ENST00000462544 (ST7-025) 117020259-117098702 processed_transcript
ENST00000464020 (ST7-020) 117219025-117223133 retained_intron
ENST00000465133 (ST7-030) 117020227-117137342 protein_coding
ENST00000465641 (ST7-018) 117182669-117222062 processed_transcript
ENST00000467538 (ST7-022) 117020218-117130505 processed_transcript
ENST00000477742 (ST7-024) 117020245-117129847 protein_coding
ENST00000485394 (ST7-017) 117173409-117209937 processed_transcript
ENST00000487459 (ST7-011) 117020184-117190932 processed_transcript
ENST00000489293 (ST7-009) 117119686-117198397 processed_transcript
ENST00000490039 (ST7-008) 117099762-117230103 protein_coding
ENST00000543837 (ST7-010) 117182681-117219090 processed_transcript
ENST00000619382 (ST7-201) 117199072-117199144 misc_RNA
ENSG00000105989 (WNT2)
wingless-type MMTV integration site family member 2 		ENST00000265441 (WNT2-002) 117276631-117323289 protein_coding
ENST00000449446 (WNT2-001) 117277531-117323114 nonsense_mediated_decay
ENST00000461427 (WNT2-003) 117320469-117323152 retained_intron
ENST00000491214 (WNT2-004) 117297726-117323041 protein_coding
ENSG00000213050 (TPM3P1)
tropomyosin 3 pseudogene 1 		ENST00000413233 (TPM3P1-001) 116972165-116972911 processed_pseudogene
ENSG00000224042 (MTND4P6)
MT-ND4 pseudogene 6 		ENST00000438297 (MTND4P6-001) 117263917-117264388 processed_pseudogene
ENSG00000227199 (ST7-AS1)
ST7 antisense RNA 1 		ENST00000456775 (ST7-AS1-001) 116952446-116954334 antisense
ENSG00000228368 (AC106873.4)
 ENST00000420664 (AC106873.4-001) 116965846-116967472 antisense
ENSG00000230785 (AC006326.3)
 ENST00000445465 (AC006326.3-001) 117262918-117264888 processed_pseudogene
ENSG00000238202 (AC002465.2)
 ENST00000436097 (AC002465.2-001) 117300861-117322236 antisense
CIL_0003QW_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000029534-ENSMUSG00000010797 CGP 10090 6:17692933-18030585
GeneTranscriptPositionBiotype
ENSMUSG00000010797 (Wnt2)
wingless-type MMTV integration site family, member 2 		ENSMUST00000010941 (Wnt2-001) 17988940-18030585 protein_coding
ENSMUST00000156317 (Wnt2-002) 17989215-18030410 nonsense_mediated_decay
ENSMUSG00000029534 (St7)
suppression of tumorigenicity 7 		ENSMUST00000000674 (St7-018) 17743592-17942966 protein_coding
ENSMUST00000052113 (St7-007) 17694032-17942966 protein_coding
ENSMUST00000053148 (St7-001) 17749170-17943025 protein_coding
ENSMUST00000077080 (St7-017) 17743592-17942937 protein_coding
ENSMUST00000081635 (St7-010) 17694032-17942966 protein_coding
ENSMUST00000115417 (St7-003) 17749216-17943020 protein_coding
ENSMUST00000115418 (St7-014) 17694167-17942966 protein_coding
ENSMUST00000115419 (St7-009) 17693994-17943022 protein_coding
ENSMUST00000115420 (St7-011) 17693947-17943022 protein_coding
ENSMUST00000125673 (St7-024) 17694032-17855028 nonsense_mediated_decay
ENSMUST00000127181 (St7-015) 17743592-17942951 processed_transcript
ENSMUST00000127322 (St7-022) 17905583-17942935 processed_transcript
ENSMUST00000129105 (St7-008) 17692933-17820447 retained_intron
ENSMUST00000130084 (St7-020) 17840537-17848461 processed_transcript
ENSMUST00000132175 (St7-004) 17749292-17836715 retained_intron
ENSMUST00000138726 (St7-002) 17749170-17906506 processed_transcript
ENSMUST00000140358 (St7-006) 17749392-17943001 retained_intron
ENSMUST00000144021 (St7-016) 17743592-17942937 processed_transcript
ENSMUST00000144488 (St7-012) 17694032-17943025 nonsense_mediated_decay
ENSMUST00000144743 (St7-019) 17854984-17906492 processed_transcript
ENSMUST00000150281 (St7-023) 17694032-17942966 nonsense_mediated_decay
ENSMUST00000154059 (St7-005) 17749329-17943022 retained_intron
ENSMUST00000154497 (St7-021) 17840556-17904923 processed_transcript
ENSMUSG00000081077 (Gm13899)
predicted gene 13899 		ENSMUST00000121519 (Gm13899-001) 17711687-17712941 processed_pseudogene
ENSMUSG00000086409 (Gm13898)
predicted gene 13898 		ENSMUST00000141865 (Gm13898-001) 17710598-17711207 processed_pseudogene
ENSMUSG00000098525 (Gm27365)
predicted gene, 27365 		ENSMUST00000184041 (Gm27365-201) 17695354-17695530 misc_RNA
ENSMUSG00000098791 (Gm27402)
predicted gene, 27402 		ENSMUST00000183890 (Gm27402-201) 17907172-17907291 misc_RNA
ENSMUSG00000098874 (Gm27960)
predicted gene, 27960 		ENSMUST00000183445 (Gm27960-201) 17694902-17695085 misc_RNA
ENSMUSG00000098988 (Gm28008)
predicted gene, 28008 		ENSMUST00000184021 (Gm28008-201) 17703231-17703416 misc_RNA
ENSMUSG00000099244 (Gm27542)
predicted gene, 27542 		ENSMUST00000184184 (Gm27542-201) 17696894-17697149 misc_RNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003QW_0001ENSG00000004866ENST00000265437ENST00000323984ENST00000393443ENST00000393444ENST00000393446ENST00000393447ENST00000393449ENST00000393451ENST00000417919ENST00000420755ENST00000421345ENST00000422922ENST00000432298ENST00000434836ENST00000438863ENST00000443979ENST00000446490ENST00000449366ENST00000462544ENST00000464020ENST00000465133ENST00000465641ENST00000467538ENST00000477742ENST00000485394ENST00000487459ENST00000489293ENST00000490039ENST00000543837ENST00000619382ENSG00000105989ENST00000265441ENST00000449446ENST00000461427ENST00000491214ENSG00000213050ENST00000413233ENSG00000224042ENST00000438297ENSG00000227199ENST00000456775ENSG00000228368ENST00000420664ENSG00000230785ENST00000445465ENSG00000238202ENST00000436097CIL_0003QW_0002ENSMUSG00000010797ENSMUST00000010941ENSMUST00000156317ENSMUSG00000029534ENSMUST00000000674ENSMUST00000052113ENSMUST00000053148ENSMUST00000077080ENSMUST00000081635ENSMUST00000115417ENSMUST00000115418ENSMUST00000115419ENSMUST00000115420ENSMUST00000125673ENSMUST00000127181ENSMUST00000127322ENSMUST00000129105ENSMUST00000130084ENSMUST00000132175ENSMUST00000138726ENSMUST00000140358ENSMUST00000144021ENSMUST00000144488ENSMUST00000144743ENSMUST00000150281ENSMUST00000154059ENSMUST00000154497ENSMUSG00000081077ENSMUST00000121519ENSMUSG00000086409ENSMUST00000141865ENSMUSG00000098525ENSMUST00000184041ENSMUSG00000098791ENSMUST00000183890ENSMUSG00000098874ENSMUST00000183445ENSMUSG00000098988ENSMUST00000184021ENSMUSG00000099244ENSMUST00000184184
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003QW_0001ENSG00000004866ENST00000265437ENST00000323984ENST00000393447ENST00000393451ENST00000422922ENST00000432298ENST00000438863ENST00000446490ENST00000487459ENST00000489293ENST00000490039ENSG00000105989ENST00000265441ENST00000449446ENST00000491214ENSG00000213050ENST00000413233ENSG00000224042ENST00000438297ENSG00000227199ENST00000456775ENSG00000228368ENST00000420664ENSG00000230785ENST00000445465ENSG00000238202ENST00000436097CIL_0003QW_0002ENSMUSG00000010797ENSMUST00000010941ENSMUST00000156317ENSMUSG00000029534ENSMUST00000000674ENSMUST00000052113ENSMUST00000053148ENSMUST00000081635ENSMUST00000115417ENSMUST00000115418ENSMUST00000115419ENSMUST00000115420ENSMUST00000125673ENSMUST00000127181ENSMUST00000127322ENSMUST00000129105ENSMUST00000138726ENSMUST00000140358ENSMUST00000144488ENSMUST00000150281ENSMUST00000154059ENSMUST00000154497ENSMUSG00000081077ENSMUST00000121519ENSMUSG00000086409ENSMUST00000141865ENSMUSG00000098525ENSMUST00000184041ENSMUSG00000098791ENSMUST00000183890ENSMUSG00000098874ENSMUST00000183445ENSMUSG00000098988ENSMUST00000184021ENSMUSG00000099244ENSMUST00000184184
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000004866 ENST00000265437 2.625±0.00 2.176±0.00 2.157±0.00 N/A N/A 1.580±0.54 2.440±1.19 1.766±0.00 1.914±0.79 2.503±0.61 1.144±0.00 4.743±2.81 4.699±1.57 3.198±0.77
ENST00000323984 2.331±0.00 1.351±0.00 N/A N/A 3.551±0.00 3.149±1.47 3.036±0.00 N/A 3.381±0.00 3.008±0.46 3.165±0.00 4.307±1.24 4.035±1.86 6.681±0.00
ENST00000393443 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000393444 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000393446 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000393447 N/A N/A N/A 3.911±0.38 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000393449 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000393451 N/A N/A N/A N/A N/A N/A 3.026±0.00 6.161±0.00 3.482±0.00 3.322±0.00 N/A 3.486±0.01 5.437±0.09 4.046±0.00
ENST00000417919 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000420755 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000421345 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000422922 N/A N/A 1.723±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000432298 N/A N/A 1.769±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 3.372±0.00 N/A N/A
ENST00000434836 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000438863 N/A N/A N/A N/A 4.695±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000443979 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000446490 N/A N/A N/A 1.793±0.00 1.813±0.00 1.783±0.00 N/A 4.268±0.00 N/A 3.945±0.00 1.503±0.00 6.405±0.00 N/A N/A
ENST00000449366 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000462544 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464020 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465133 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465641 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467538 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477742 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485394 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487459 N/A N/A N/A N/A N/A N/A 1.633±0.00 N/A 1.463±0.00 N/A N/A N/A N/A N/A
ENST00000489293 N/A N/A N/A 4.200±0.00 N/A N/A N/A N/A N/A N/A 1.305±0.00 N/A N/A N/A
ENST00000490039 N/A 2.167±0.00 N/A N/A 2.747±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000543837 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000619382 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000105989 ENST00000265441 N/A 0.306±0.00 N/A 0.135±0.06 0.533±0.05 0.019±0.00 0.045±0.00 0.140±0.00 0.281±0.02 2.505±1.51 N/A 0.601±0.20 17.956±8.77 N/A
ENST00000449446 0.091±0.00 0.482±0.00 N/A 0.128±0.02 0.514±0.00 N/A 0.035±0.00 0.211±0.06 0.581±0.36 7.422±0.00 0.495±0.00 0.876±0.20 39.322±16.43 0.677±0.39
ENST00000461427 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491214 0.050±0.00 N/A N/A N/A N/A N/A 0.136±0.07 0.317±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000213050 ENST00000413233 0.070±0.00 0.097±0.00 1.702±0.00 N/A 0.808±0.00 0.064±0.00 0.197±0.02 0.040±0.00 0.115±0.08 0.192±0.17 0.211±0.11 0.288±0.42 0.043±0.01 N/A
ENSG00000224042 ENST00000438297 N/A N/A N/A 0.104±0.00 N/A N/A N/A N/A 0.016±0.00 N/A N/A N/A N/A 0.071±0.05
ENSG00000227199 ENST00000456775 2.385±0.00 2.999±0.00 N/A 3.331±0.00 N/A N/A N/A N/A N/A N/A N/A 6.190±0.00 N/A N/A
ENSG00000228368 ENST00000420664 N/A 0.085±0.00 N/A N/A 0.331±0.28 0.389±0.00 0.141±0.11 N/A N/A 0.717±0.00 N/A 0.475±0.28 0.132±0.00 N/A
ENSG00000230785 ENST00000445465 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.025±0.00 N/A
ENSG00000238202 ENST00000436097 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.107±0.01
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000010797 ENSMUST00000010941 1.297±0.22 0.261±0.12 7.197±1.05 0.274±0.28 5.128±2.32 0.276±0.14 0.313±0.13 0.182±0.07 0.700±0.40 7.307±0.79 0.068±0.01 0.234±0.14 0.800±0.36 0.468±0.38
ENSMUST00000156317 0.355±0.00 0.249±0.16 12.554±1.38 0.686±0.57 2.007±0.76 0.322±0.07 0.152±0.04 0.129±0.05 0.620±0.35 2.903±1.28 0.062±0.02 0.256±0.21 1.219±0.61 0.441±0.13
ENSMUSG00000029534 ENSMUST00000000674 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.290±1.11 1.700±0.21 N/A
ENSMUST00000052113 4.219±0.73 4.886±0.69 6.501±1.10 N/A 2.339±0.19 N/A 2.466±0.36 6.809±0.73 3.738±1.29 5.687±0.99 1.848±0.33 3.172±0.87 2.607±0.96 1.340±0.23
ENSMUST00000053148 N/A N/A N/A 5.662±0.84 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000077080 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000081635 N/A N/A 3.648±0.53 1.055±0.00 1.685±0.50 N/A 1.881±0.42 N/A 0.969±0.00 N/A 1.097±0.41 1.128±0.64 1.095±0.00 N/A
ENSMUST00000115417 N/A N/A N/A 9.583±0.87 N/A N/A N/A N/A 1.496±0.11 N/A N/A N/A 0.266±0.00 N/A
ENSMUST00000115418 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.073±0.00 0.888±0.36 N/A
ENSMUST00000115419 1.551±0.00 N/A N/A N/A N/A 1.965±0.48 N/A N/A 0.941±0.36 N/A 1.088±0.53 1.816±0.14 1.218±0.00 N/A
ENSMUST00000115420 1.351±0.33 1.340±0.00 N/A N/A 1.160±0.11 1.868±0.47 N/A 2.423±0.99 0.981±0.41 N/A N/A 3.484±1.66 N/A N/A
ENSMUST00000125673 N/A 5.695±2.56 N/A N/A N/A 1.720±0.00 N/A N/A N/A N/A N/A 2.543±0.00 N/A N/A
ENSMUST00000127181 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.804±0.33
ENSMUST00000127322 1.675±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.697±0.00 2.378±0.87 3.088±0.52
ENSMUST00000129105 N/A 1.977±0.52 N/A N/A 0.892±0.00 2.745±1.17 N/A N/A N/A N/A N/A 1.946±0.40 N/A 0.305±0.00
ENSMUST00000130084 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132175 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138726 N/A N/A N/A N/A N/A N/A 1.026±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140358 0.755±0.00 N/A N/A 7.280±0.00 0.538±0.00 N/A N/A N/A N/A N/A N/A 0.260±0.13 N/A 0.771±0.00
ENSMUST00000144021 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144488 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.242±0.00 N/A
ENSMUST00000144743 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150281 N/A 2.313±0.14 N/A N/A N/A 1.260±0.15 N/A N/A N/A N/A N/A 2.519±0.98 N/A N/A
ENSMUST00000154059 N/A N/A 1.418±0.17 5.998±0.13 N/A N/A 0.413±0.00 N/A N/A N/A N/A 1.080±0.27 N/A 0.721±0.11
ENSMUST00000154497 N/A N/A N/A 8.932±0.00 N/A N/A N/A N/A N/A N/A N/A 6.963±0.00 6.449±2.99 7.356±0.00
ENSMUSG00000081077 ENSMUST00000121519 0.112±0.02 0.163±0.00 N/A 0.023±0.00 0.153±0.07 0.236±0.01 0.033±0.00 0.074±0.05 0.154±0.11 0.053±0.00 N/A N/A 0.093±0.02 0.063±0.03
ENSMUSG00000086409 ENSMUST00000141865 0.110±0.02 0.164±0.07 0.200±0.02 0.086±0.04 0.163±0.07 0.225±0.14 0.148±0.02 0.090±0.03 N/A 0.091±0.03 0.067±0.00 0.446±0.26 0.129±0.04 0.064±0.00
ENSMUSG00000098525 ENSMUST00000184041 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.300±0.00 N/A
ENSMUSG00000098791 ENSMUST00000183890 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 12.507±0.00
ENSMUSG00000098874 ENSMUST00000183445 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.787±1.98 N/A
ENSMUSG00000098988 ENSMUST00000184021 N/A N/A 1.515±0.62 N/A N/A N/A N/A N/A 1.403±0.00 N/A N/A N/A 0.528±0.15 1.573±0.00
ENSMUSG00000099244 ENSMUST00000184184 1.307±0.00 N/A 0.340±0.12 N/A 1.679±0.87 0.899±0.00 N/A 0.378±0.00 0.404±0.13 2.093±0.00 N/A 1.409±0.65 0.142±0.02 0.433±0.00

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