C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003S8_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000112799-ENSG00000124782 CGP 9606 6:6588108-7251980
GeneTranscriptPositionBiotype
ENSG00000112799 (LY86)
lymphocyte antigen 86 		ENST00000230568 (LY86-002) 6588669-6654631 protein_coding
ENST00000379953 (LY86-001) 6588108-6654983 protein_coding
ENSG00000124782 (RREB1)
ras responsive element binding protein 1 		ENST00000334984 (RREB1-003) 7108031-7250012 protein_coding
ENST00000349384 (RREB1-002) 7108031-7251030 protein_coding
ENST00000379933 (RREB1-004) 7107597-7249274 protein_coding
ENST00000379938 (RREB1-001) 7107808-7251980 protein_coding
ENST00000467782 (RREB1-012) 7108026-7181923 protein_coding
ENST00000471433 (RREB1-011) 7107821-7210871 protein_coding
ENST00000475946 (RREB1-005) 7108632-7219091 retained_intron
ENST00000483150 (RREB1-008) 7139245-7230433 protein_coding
ENST00000491191 (RREB1-007) 7107799-7189306 protein_coding
ENST00000611109 (RREB1-201) 7230642-7250012 protein_coding
ENSG00000203498 (RP11-556O15.1)
 ENST00000423568 (RP11-556O15.1-001) 6993191-6995554 lincRNA
ENSG00000216863 (LY86-AS1)
LY86 antisense RNA 1 		ENST00000429345 (LY86-AS1-002) 6346465-6622744 antisense
ENST00000435641 (LY86-AS1-001) 6360591-6622695 antisense
ENST00000447858 (LY86-AS1-003) 6366132-6587193 antisense
ENST00000606044 (LY86-AS1-005) 6620964-6622697 antisense
ENST00000606992 (LY86-AS1-006) 6475306-6492984 antisense
ENST00000607278 (LY86-AS1-004) 6620847-6622771 antisense
ENSG00000219986 (BTF3P7)
basic transcription factor 3 pseudogene 7 		ENST00000407097 (BTF3P7-001) 6794915-6795402 processed_pseudogene
ENSG00000223342 (RP3-429O6.1)
 ENST00000422310 (RP3-429O6.1-001) 6901022-6918715 lincRNA
ENSG00000224532 (RP3-470L22.1)
 ENST00000435429 (RP3-470L22.1-001) 6758276-6759291 lincRNA
ENSG00000225092 (RP11-405O10.2)
 ENST00000451355 (RP11-405O10.2-001) 7183083-7185287 sense_intronic
ENSG00000226281 (RP1-80N2.2)
 ENST00000432823 (RP1-80N2.2-001) 6692744-6711002 lincRNA
ENSG00000261211 (RP1-80N2.3)
 ENST00000563225 (RP1-80N2.3-001) 6680309-6683633 lincRNA
ENSG00000279368 (RP1-80N2.4)
 ENST00000623345 (RP1-80N2.4-001) 6685148-6686984 TEC
CIL_0003S8_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000021423-ENSMUSG00000039087 CGP 10090 13:37345345-37952002
GeneTranscriptPositionBiotype
ENSMUSG00000021423 (Ly86)
lymphocyte antigen 86 		ENSMUST00000021860 (Ly86-201) 37345345-37419036 protein_coding
ENSMUSG00000039087 (Rreb1)
ras responsive element binding protein 1 		ENSMUST00000037232 (Rreb1-201) 37888871-37951994 protein_coding
ENSMUST00000110237 (Rreb1-002) 37827393-37932693 protein_coding
ENSMUST00000110238 (Rreb1-001) 37826039-37935545 protein_coding
ENSMUST00000122842 (Rreb1-009) 37778400-37893849 protein_coding
ENSMUST00000124268 (Rreb1-004) 37888434-37952002 nonsense_mediated_decay
ENSMUST00000124373 (Rreb1-006) 37826932-37947024 nonsense_mediated_decay
ENSMUST00000128570 (Rreb1-005) 37826315-37952000 protein_coding
ENSMUST00000138043 (Rreb1-007) 37825975-37893826 protein_coding
ENSMUST00000138110 (Rreb1-008) 37857934-37893914 protein_coding
ENSMUST00000149745 (Rreb1-003) 37826932-37932691 protein_coding
ENSMUST00000162849 (Rreb1-010) 37947016-37949206 protein_coding
ENSMUSG00000099847 (RP23-21N15.5)
predicted gene 29458 		ENSMUST00000187093 (RP23-21N15.5-001) 37452212-37453208 lincRNA
ENSMUSG00000100022 (RP23-21N15.2)
predicted gene 29590 		ENSMUST00000190396 (RP23-21N15.2-001) 37508940-37512074 lincRNA
ENSMUSG00000100760 (RP23-21N15.3)
predicted gene 4035 		ENSMUST00000189445 (RP23-21N15.3-002) 37421833-37424279 lincRNA
ENSMUST00000190684 (RP23-21N15.3-001) 37421945-37435149 lincRNA
ENSMUSG00000100932 (RP23-21N15.4)
predicted gene 29459 		ENSMUST00000191359 (RP23-21N15.4-001) 37449400-37451157 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003S8_0001ENSG00000112799ENST00000230568ENST00000379953ENSG00000124782ENST00000334984ENST00000379933ENST00000379938ENST00000471433ENST00000475946ENST00000491191ENST00000611109ENSG00000203498ENST00000423568ENSG00000216863ENST00000429345ENST00000435641ENST00000447858ENST00000606044ENST00000606992ENST00000607278ENSG00000219986ENST00000407097ENSG00000223342ENST00000422310ENSG00000224532ENST00000435429ENSG00000225092ENST00000451355ENSG00000226281ENST00000432823ENSG00000261211ENST00000563225ENSG00000279368ENST00000623345CIL_0003S8_0002ENSMUSG00000021423ENSMUST00000021860ENSMUSG00000039087ENSMUST00000037232ENSMUST00000110238ENSMUST00000124268ENSMUST00000128570ENSMUST00000149745ENSMUST00000162849ENSMUSG00000099847ENSMUST00000187093ENSMUSG00000100022ENSMUST00000190396ENSMUSG00000100760ENSMUST00000189445ENSMUST00000190684ENSMUSG00000100932ENSMUST00000191359
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000112799 ENST00000230568 0.796±0.00 N/A N/A N/A 1.052±0.11 0.920±0.00 N/A 4.268±0.00 N/A N/A N/A 0.579±0.00 6.153±0.00 N/A
ENST00000379953 1.346±0.00 21.594±0.00 0.351±0.00 2.295±1.00 1.099±0.00 0.369±0.29 0.504±0.31 1.585±0.00 1.128±0.37 5.412±2.25 0.301±0.00 1.578±1.70 8.807±1.11 1.330±1.22
ENSG00000124782 ENST00000334984 N/A N/A N/A N/A 1.398±0.00 N/A N/A N/A N/A N/A 0.731±0.00 N/A N/A N/A
ENST00000349384 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000379933 N/A 2.424±0.00 N/A N/A N/A N/A 0.548±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000379938 N/A 1.348±0.00 N/A 0.235±0.00 4.705±0.00 0.852±0.00 3.983±0.00 0.900±0.00 1.271±0.63 2.739±0.00 2.696±0.00 3.930±3.52 N/A 1.235±0.00
ENST00000467782 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000471433 N/A N/A N/A 0.770±0.00 N/A N/A N/A N/A 6.977±0.00 N/A N/A N/A N/A N/A
ENST00000475946 N/A N/A N/A 0.053±0.00 1.846±0.00 N/A 0.270±0.00 N/A N/A N/A N/A 2.049±0.00 N/A N/A
ENST00000483150 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491191 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.156±0.00 N/A N/A N/A
ENST00000611109 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.150±0.00 N/A N/A N/A
ENSG00000203498 ENST00000423568 0.087±0.00 0.121±0.00 N/A N/A N/A N/A 0.028±0.00 N/A N/A N/A N/A 0.071±0.01 0.058±0.00 1.364±0.95
ENSG00000216863 ENST00000429345 0.030±0.00 0.113±0.00 0.044±0.00 1.742±0.00 0.032±0.00 N/A N/A 0.132±0.00 0.005±0.00 N/A N/A N/A N/A 0.095±0.00
ENST00000435641 N/A 0.104±0.00 N/A N/A 0.018±0.00 N/A 0.008±0.00 0.024±0.00 N/A N/A N/A 0.056±0.00 0.027±0.00 0.091±0.00
ENST00000447858 N/A N/A 0.458±0.00 0.711±0.00 N/A N/A 0.062±0.00 N/A N/A 0.109±0.01 N/A N/A 0.081±0.01 N/A
ENST00000606044 N/A N/A N/A N/A 0.411±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000606992 0.124±0.00 0.331±0.00 N/A 0.081±0.00 N/A 0.117±0.00 0.024±0.00 0.051±0.00 0.045±0.00 0.164±0.00 N/A N/A 0.107±0.00 0.370±0.00
ENST00000607278 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.121±0.00 N/A N/A N/A N/A
ENSG00000219986 ENST00000407097 N/A N/A 0.589±0.00 0.028±0.00 0.054±0.00 0.026±0.00 N/A N/A N/A 0.051±0.00 0.024±0.00 0.152±0.00 N/A N/A
ENSG00000223342 ENST00000422310 N/A N/A N/A N/A 0.054±0.00 N/A N/A N/A N/A N/A 0.108±0.00 N/A N/A N/A
ENSG00000224532 ENST00000435429 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.253±0.00
ENSG00000225092 ENST00000451355 0.040±0.00 0.144±0.00 0.875±0.00 0.035±0.00 0.680±0.63 1.291±1.28 0.451±0.40 0.437±0.42 0.671±0.65 1.399±1.38 1.127±0.00 1.073±1.03 N/A 0.034±0.01
ENSG00000226281 ENST00000432823 N/A 0.120±0.00 1.152±0.00 N/A 0.165±0.00 0.131±0.00 0.198±0.01 0.998±0.00 N/A N/A 0.142±0.00 0.229±0.00 0.243±0.09 0.424±0.19
ENSG00000261211 ENST00000563225 0.136±0.00 0.190±0.00 0.145±0.00 0.118±0.00 0.175±0.09 0.180±0.03 0.101±0.05 0.195±0.17 0.040±0.00 0.129±0.03 0.089±0.00 0.166±0.10 0.060±0.02 0.356±0.17
ENSG00000279368 ENST00000623345 0.048±0.00 0.047±0.00 1.275±0.00 0.014±0.00 0.676±0.00 0.755±0.70 0.163±0.01 0.497±0.37 0.064±0.05 0.347±0.23 N/A 0.260±0.30 0.091±0.04 0.249±0.16
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021423 ENSMUST00000021860 8.358±2.46 2.529±0.41 10.949±1.40 3.039±0.89 20.157±1.30 3.391±0.68 1.643±0.58 3.540±1.08 6.725±4.83 4.913±1.34 0.973±0.80 5.183±2.00 1.853±1.46 0.329±0.18
ENSMUSG00000039087 ENSMUST00000037232 3.831±1.18 3.223±1.08 N/A 0.706±0.51 1.976±0.95 3.598±1.06 2.769±0.47 2.299±0.14 1.660±0.57 3.723±1.91 1.786±0.94 3.225±1.30 4.779±1.16 0.892±0.00
ENSMUST00000110237 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000110238 N/A N/A N/A N/A N/A N/A 0.624±0.00 N/A 0.776±0.00 N/A N/A N/A N/A N/A
ENSMUST00000122842 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000124268 N/A N/A N/A 0.270±0.00 N/A 2.404±0.00 N/A N/A 0.645±0.17 N/A N/A 1.959±0.82 N/A N/A
ENSMUST00000124373 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000128570 1.636±0.00 N/A 5.347±0.81 0.435±0.20 1.235±0.04 3.914±0.00 N/A 1.036±0.00 2.153±0.97 4.824±0.00 2.696±1.40 1.867±0.00 6.462±1.66 N/A
ENSMUST00000138043 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138110 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149745 N/A 3.953±0.65 N/A N/A 3.508±0.35 3.615±0.31 N/A N/A N/A N/A N/A 3.748±0.79 N/A 0.575±0.04
ENSMUST00000162849 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.591±0.00
ENSMUSG00000099847 ENSMUST00000187093 0.312±0.11 0.351±0.01 0.545±0.00 0.145±0.01 0.513±0.15 0.498±0.19 N/A N/A 0.205±0.12 0.330±0.11 N/A 0.534±0.29 0.041±0.01 0.186±0.01
ENSMUSG00000100022 ENSMUST00000190396 0.069±0.02 0.183±0.09 0.025±0.00 0.012±0.00 N/A 0.541±0.21 0.035±0.01 0.073±0.00 0.049±0.02 0.071±0.03 N/A 0.117±0.07 0.042±0.01 0.131±0.08
ENSMUSG00000100760 ENSMUST00000189445 N/A N/A 0.134±0.00 0.031±0.00 0.209±0.00 N/A 0.142±0.00 0.297±0.00 0.026±0.00 0.245±0.00 N/A 0.458±0.36 0.110±0.05 0.173±0.00
ENSMUST00000190684 0.283±0.15 N/A 0.043±0.00 N/A 0.124±0.01 0.172±0.00 N/A N/A N/A 0.361±0.00 N/A N/A N/A 0.233±0.11
ENSMUSG00000100932 ENSMUST00000191359 0.112±0.00 N/A 0.217±0.00 0.020±0.00 N/A 0.595±0.00 N/A 0.112±0.00 0.024±0.00 0.149±0.00 N/A 0.302±0.16 0.060±0.03 N/A

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