C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003SB_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000090936-ENSDARG00000027419 CGP 7955 6:3631310-3676989
GeneTranscriptPositionBiotype
ENSDARG00000027419 (gad1b)
glutamate decarboxylase 1b 		ENSDART00000003008 (gad1b-201) 3642810-3676988 protein_coding
ENSDART00000122348 (gad1b-001) 3642627-3676989 protein_coding
ENSDART00000138185 (gad1b-003) 3649318-3665118 processed_transcript
ENSDART00000140419 (gad1b-002) 3642653-3653104 processed_transcript
ENSDARG00000090936 (ERICH2)
glutamate-rich 2 		ENSDART00000129241 (ERICH2-201) 3631310-3640803 protein_coding
CIL_0003SB_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000204334-ENSG00000128683 CGP 9606 2:170783786-170861151
GeneTranscriptPositionBiotype
ENSG00000128683 (GAD1)
glutamate decarboxylase 1 (brain, 67kDa) 		ENST00000344257 (GAD1-002) 170816912-170842759 protein_coding
ENST00000358196 (GAD1-001) 170816562-170861151 protein_coding
ENST00000375272 (GAD1-201) 170816690-170842756 protein_coding
ENST00000414527 (GAD1-013) 170817038-170859916 nonsense_mediated_decay
ENST00000429023 (GAD1-004) 170818611-170844157 processed_transcript
ENST00000445006 (GAD1-008) 170816114-170822116 protein_coding
ENST00000454603 (GAD1-007) 170813213-170829585 protein_coding
ENST00000455008 (GAD1-009) 170817255-170830991 protein_coding
ENST00000456864 (GAD1-010) 170817769-170831008 protein_coding
ENST00000462739 (GAD1-014) 170843802-170845543 retained_intron
ENST00000478562 (GAD1-006) 170852488-170861147 retained_intron
ENST00000485013 (GAD1-011) 170821718-170829620 retained_intron
ENST00000486850 (GAD1-015) 170822087-170829872 protein_coding
ENST00000488724 (GAD1-005) 170849067-170860253 retained_intron
ENST00000493270 (GAD1-012) 170828968-170831090 retained_intron
ENST00000493875 (GAD1-003) 170817770-170861151 nonsense_mediated_decay
ENSG00000204334 (ERICH2)
glutamate-rich 2 		ENST00000409885 (ERICH2-001) 170783786-170798971 protein_coding
CIL_0003SB_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000075302-ENSMUSG00000070880 CGP 10090 2:70508819-70602014
GeneTranscriptPositionBiotype
ENSMUSG00000070880 (Gad1)
glutamate decarboxylase 1 		ENSMUST00000094934 (Gad1-001) 70562042-70602014 protein_coding
ENSMUST00000123330 (Gad1-008) 70563442-70585946 protein_coding
ENSMUST00000130604 (Gad1-002) 70562042-70587136 nonsense_mediated_decay
ENSMUST00000130618 (Gad1-007) 70553072-70567233 protein_coding
ENSMUST00000130998 (Gad1-004) 70562899-70585121 protein_coding
ENSMUST00000140478 (Gad1-006) 70566377-70602012 processed_transcript
ENSMUST00000148210 (Gad1-003) 70562196-70584600 protein_coding
ENSMUST00000155979 (Gad1-005) 70562163-70577130 retained_intron
ENSMUSG00000075302 (Erich2)
glutamate rich 2 		ENSMUST00000100041 (Erich2-001) 70508819-70540884 protein_coding
ENSMUST00000123137 (Erich2-002) 70509460-70523521 retained_intron
ENSMUST00000134607 (Erich2-003) 70508831-70540884 protein_coding
ENSMUST00000136967 (Erich2-004) 70509460-70537247 retained_intron
ENSMUST00000153121 (Erich2-005) 70509497-70527461 protein_coding
ENSMUSG00000086515 (Erich2os)
glutamate rich 2, opposite strand 		ENSMUST00000150702 (Erich2os-001) 70503433-70509199 antisense
ENSMUSG00000087264 (Gad1os)
glutamate decarboxylase 1, opposite strand 		ENSMUST00000151851 (Gad1os-001) 70489940-70563357 antisense
ENSMUST00000154284 (Gad1os-002) 70490244-70491468 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003SB_0001ENSDARG00000027419ENSDART00000003008ENSDART00000122348ENSDART00000138185ENSDART00000140419ENSDARG00000090936ENSDART00000129241CIL_0003SB_0002ENSG00000128683ENST00000344257ENST00000358196ENST00000375272ENST00000414527ENST00000429023ENST00000445006ENST00000454603ENST00000455008ENST00000456864ENST00000462739ENST00000478562ENST00000485013ENST00000486850ENST00000488724ENST00000493270ENST00000493875ENSG00000204334ENST00000409885CIL_0003SB_0003ENSMUSG00000070880ENSMUST00000094934ENSMUST00000123330ENSMUST00000130604ENSMUST00000130618ENSMUST00000130998ENSMUST00000140478ENSMUST00000148210ENSMUST00000155979ENSMUSG00000075302ENSMUST00000100041ENSMUST00000123137ENSMUST00000134607ENSMUST00000136967ENSMUST00000153121ENSMUSG00000086515ENSMUST00000150702ENSMUSG00000087264ENSMUST00000151851ENSMUST00000154284
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003SB_0001ENSDARG00000027419ENSDART00000003008ENSDART00000122348ENSDART00000138185ENSDART00000140419ENSDARG00000090936ENSDART00000129241CIL_0003SB_0002ENSG00000128683ENST00000344257ENST00000358196ENST00000414527ENST00000429023ENST00000478562ENST00000485013ENST00000488724ENST00000493270ENST00000493875ENSG00000204334ENST00000409885CIL_0003SB_0003ENSMUSG00000070880ENSMUST00000094934ENSMUST00000123330ENSMUST00000130604ENSMUST00000130618ENSMUST00000130998ENSMUST00000140478ENSMUST00000148210ENSMUST00000155979ENSMUSG00000075302ENSMUST00000100041ENSMUST00000123137ENSMUST00000134607ENSMUST00000136967ENSMUST00000153121ENSMUSG00000086515ENSMUST00000150702ENSMUSG00000087264ENSMUST00000151851ENSMUST00000154284
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000027419 ENSDART00000003008 N/A N/A N/A 220.882±22.42 N/A N/A 0.038±0.02 0.089±0.04 0.128±0.00 N/A 4.797±0.00 N/A N/A N/A
ENSDART00000122348 N/A N/A N/A 42.897±12.74 N/A N/A N/A N/A N/A N/A 3.723±0.00 N/A N/A N/A
ENSDART00000138185 N/A N/A N/A N/A N/A N/A 0.202±0.00 0.160±0.00 0.064±0.00 N/A N/A N/A N/A N/A
ENSDART00000140419 N/A N/A N/A N/A N/A N/A N/A 0.465±0.00 N/A N/A N/A N/A N/A N/A
ENSDARG00000090936 ENSDART00000129241 N/A N/A N/A 0.941±0.20 N/A N/A 0.578±0.07 0.585±0.16 N/A N/A 0.065±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000128683 ENST00000344257 N/A 0.219±0.00 N/A N/A 0.336±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000358196 0.007±0.00 N/A N/A 2.353±0.00 N/A N/A 0.011±0.00 0.359±0.00 N/A N/A N/A N/A 0.061±0.00 N/A
ENST00000375272 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000414527 N/A N/A 0.788±0.00 N/A N/A N/A N/A N/A N/A 0.112±0.00 N/A N/A N/A N/A
ENST00000429023 N/A N/A N/A N/A 0.072±0.00 N/A N/A N/A N/A 0.426±0.00 N/A N/A N/A N/A
ENST00000445006 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000454603 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000455008 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000456864 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000462739 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478562 N/A N/A N/A N/A 0.209±0.00 N/A 0.008±0.00 N/A 0.025±0.00 0.058±0.00 N/A 0.157±0.00 0.010±0.00 N/A
ENST00000485013 N/A N/A N/A N/A N/A N/A N/A N/A 0.119±0.00 N/A N/A N/A N/A N/A
ENST00000486850 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488724 N/A N/A N/A N/A N/A N/A 0.028±0.00 N/A 0.217±0.00 N/A N/A N/A N/A N/A
ENST00000493270 0.137±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.080±0.00 N/A
ENST00000493875 N/A 0.036±0.00 N/A N/A 0.024±0.00 0.022±0.00 N/A N/A N/A N/A N/A 0.041±0.00 N/A N/A
ENSG00000204334 ENST00000409885 1.515±0.00 0.019±0.00 0.596±0.00 0.707±0.48 0.846±0.00 0.652±0.56 0.246±0.21 0.616±0.31 0.572±0.15 1.393±0.41 N/A 0.842±0.58 0.450±0.23 83.573±42.06
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000070880 ENSMUST00000094934 N/A 0.157±0.02 N/A 19.780±1.33 0.076±0.02 0.135±0.00 N/A 0.063±0.03 N/A 0.065±0.00 N/A N/A 0.039±0.00 0.084±0.02
ENSMUST00000123330 N/A 0.106±0.00 N/A N/A 0.044±0.00 0.034±0.00 N/A N/A N/A 0.042±0.01 N/A 0.074±0.00 0.113±0.00 N/A
ENSMUST00000130604 N/A 0.169±0.02 N/A N/A N/A 0.080±0.00 N/A 0.182±0.00 N/A N/A N/A 0.080±0.00 N/A 0.052±0.01
ENSMUST00000130618 N/A 1.925±0.73 N/A N/A 0.291±0.15 0.231±0.07 N/A 0.595±0.24 N/A 0.127±0.00 N/A 0.344±0.00 0.236±0.04 0.454±0.20
ENSMUST00000130998 N/A N/A N/A N/A 0.029±0.00 N/A N/A 0.038±0.01 N/A 0.027±0.00 N/A N/A 0.039±0.01 0.038±0.00
ENSMUST00000140478 0.011±0.00 0.276±0.11 0.015±0.01 14.642±2.21 0.092±0.06 0.058±0.00 0.037±0.02 0.092±0.04 0.042±0.04 0.053±0.03 0.021±0.02 0.053±0.03 0.037±0.02 0.039±0.00
ENSMUST00000148210 N/A N/A N/A N/A N/A N/A N/A 0.105±0.01 N/A N/A N/A N/A 0.044±0.00 N/A
ENSMUST00000155979 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.103±0.09 N/A 0.012±0.00
ENSMUSG00000075302 ENSMUST00000100041 0.113±0.00 N/A 0.078±0.00 0.230±0.08 N/A 0.031±0.01 N/A N/A 0.015±0.01 0.262±0.09 0.016±0.00 0.722±0.81 0.026±0.00 72.714±14.38
ENSMUST00000123137 N/A N/A N/A N/A N/A 0.162±0.00 0.177±0.00 N/A 0.016±0.00 N/A N/A 1.189±0.15 N/A N/A
ENSMUST00000134607 0.122±0.00 0.072±0.03 0.085±0.00 0.400±0.34 N/A 0.063±0.03 0.092±0.05 0.363±0.01 N/A N/A 0.056±0.00 1.201±2.62 0.183±0.11 404.499±0.00
ENSMUST00000136967 0.063±0.03 0.065±0.00 0.101±0.00 0.238±0.01 0.032±0.00 0.080±0.00 0.081±0.00 0.442±0.05 0.012±0.00 0.441±0.07 0.012±0.00 0.341±0.17 N/A N/A
ENSMUST00000153121 N/A N/A N/A N/A N/A N/A 0.431±0.00 N/A 0.158±0.00 N/A 0.168±0.00 2.323±0.00 1.370±0.00 N/A
ENSMUSG00000086515 ENSMUST00000150702 0.644±0.03 0.211±0.07 0.292±0.09 0.690±0.04 0.266±0.17 0.097±0.00 0.133±0.02 2.343±0.24 0.089±0.06 1.102±0.21 N/A 0.579±0.24 0.182±0.13 N/A
ENSMUSG00000087264 ENSMUST00000151851 0.058±0.00 0.115±0.08 0.019±0.01 0.302±0.23 0.048±0.00 N/A N/A 0.682±0.19 0.018±0.01 0.346±0.20 N/A 0.177±0.11 0.049±0.03 3.488±1.23
ENSMUST00000154284 1.041±0.19 0.279±0.00 0.136±0.02 0.174±0.00 0.305±0.25 N/A 0.306±0.00 1.044±0.50 0.074±0.01 1.264±0.33 N/A 1.153±0.83 0.416±0.00 7.781±5.36

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