C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003SH_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000105520-ENSG00000173928 CGP 9606 19:11355386-11376951
GeneTranscriptPositionBiotype
ENSG00000105520 (LPPR2)
Lipid phosphate phosphatase-related protein type 2 		ENST00000251473 (LPPR2-001) 11355386-11365698 protein_coding
ENST00000586380 (LPPR2-006) 11355466-11359838 protein_coding
ENST00000586431 (LPPR2-005) 11355431-11359708 processed_transcript
ENST00000587801 (LPPR2-008) 11359723-11363768 retained_intron
ENST00000588196 (LPPR2-007) 11357696-11359894 retained_intron
ENST00000588360 (LPPR2-009) 11361266-11364215 retained_intron
ENST00000591329 (LPPR2-004) 11355424-11359719 protein_coding
ENST00000591608 (LPPR2-002) 11355498-11365694 protein_coding
ENSG00000173928 (SWSAP1)
SWIM-type zinc finger 7 associated protein 1 		ENST00000312423 (SWSAP1-001) 11374685-11376951 protein_coding
ENSG00000267277 (CTD-2342J14.6)
 ENST00000590399 (CTD-2342J14.6-001) 11368123-11374935 antisense

Homo sapiens Ensembl (GRCh38)

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CIL_0003SH_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000040563-ENSMUSG00000051238 CGP 10090 9:21937033-21958270
GeneTranscriptPositionBiotype
ENSMUSG00000040563 (BC018242)
lipid phosphate phosphatase-related protein type 2 		ENSMUST00000046371 (BC018242-001) 21937033-21948904 protein_coding
ENSMUST00000188468 (BC018242-003) 21938453-21948017 protein_coding
ENSMUST00000190387 (BC018242-002) 21938274-21948907 protein_coding
ENSMUSG00000051238 (Swsap1)
SWIM type zinc finger 7 associated protein 1 		ENSMUST00000053583 (Swsap1-201) 21955753-21958270 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003SH_0001ENSG00000105520ENST00000251473ENST00000586380ENST00000586431ENST00000587801ENST00000588196ENST00000588360ENST00000591329ENST00000591608ENSG00000173928ENST00000312423ENSG00000267277ENST00000590399CIL_0003SH_0002ENSMUSG00000040563ENSMUST00000046371ENSMUST00000188468ENSMUST00000190387ENSMUSG00000051238ENSMUST00000053583
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003SH_0001ENSG00000105520ENST00000251473ENST00000586431ENST00000587801ENST00000591329ENST00000591608ENSG00000173928ENST00000312423ENSG00000267277ENST00000590399CIL_0003SH_0002ENSMUSG00000040563ENSMUST00000046371ENSMUST00000188468ENSMUST00000190387ENSMUSG00000051238ENSMUST00000053583
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000105520 ENST00000251473 10.493±0.00 11.139±0.00 N/A 6.691±2.32 6.843±0.00 5.193±0.00 1.873±1.72 3.142±2.75 5.674±0.00 6.036±0.00 6.077±4.63 14.264±12.24 7.113±2.17 6.998±6.43
ENST00000586380 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586431 N/A N/A 0.237±0.00 N/A N/A 0.277±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587801 N/A N/A N/A N/A N/A N/A N/A 0.889±0.00 N/A N/A N/A N/A N/A N/A
ENST00000588196 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588360 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591329 N/A N/A N/A N/A N/A N/A N/A 1.246±0.00 N/A N/A N/A N/A N/A N/A
ENST00000591608 5.535±0.00 2.090±0.00 0.342±0.00 1.947±1.26 3.847±0.00 0.995±0.84 N/A 4.922±0.00 0.737±0.00 0.339±0.00 4.668±0.00 6.259±4.03 7.828±1.50 5.829±0.00
ENSG00000173928 ENST00000312423 0.432±0.00 0.774±0.00 N/A 0.281±0.20 0.448±0.28 0.596±0.19 0.320±0.18 0.869±0.32 0.704±0.53 0.373±0.17 0.301±0.16 0.941±0.46 1.760±0.55 1.456±0.39
ENSG00000267277 ENST00000590399 N/A N/A N/A 0.972±0.00 N/A N/A 0.255±0.00 N/A N/A N/A N/A N/A N/A 0.884±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000040563 ENSMUST00000046371 4.811±1.02 17.125±2.63 5.999±0.26 36.613±16.59 2.866±1.67 2.461±0.63 1.233±0.78 1.146±0.49 2.314±0.99 2.073±0.23 0.464±0.10 4.600±1.10 0.598±0.35 7.195±0.67
ENSMUST00000188468 N/A 7.295±0.52 N/A N/A 1.786±0.00 1.572±0.00 N/A N/A 1.186±0.34 1.437±0.05 0.174±0.00 3.454±0.92 N/A N/A
ENSMUST00000190387 2.197±0.15 8.360±2.24 2.197±0.12 12.365±7.47 2.923±0.92 1.510±0.40 0.584±0.20 0.449±0.00 1.309±0.57 1.436±0.31 0.275±0.11 3.203±0.99 0.368±0.12 9.077±0.60
ENSMUSG00000051238 ENSMUST00000053583 4.520±0.97 16.810±1.13 2.250±0.04 1.990±0.88 4.831±2.03 6.717±0.41 2.227±0.74 5.221±0.51 2.078±0.56 6.319±0.51 1.111±0.15 4.955±1.75 1.787±0.63 2.402±1.14

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