C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003SY_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000183401-ENSG00000105520 CGP 9606 19:11344684-11365698
GeneTranscriptPositionBiotype
ENSG00000105514 (RAB3D)
RAB3D, member RAS oncogene family 		ENST00000222120 (RAB3D-001) 11322046-11339668 protein_coding
ENST00000589655 (RAB3D-002) 11325339-11346270 protein_coding
ENSG00000105518 (TMEM205)
transmembrane protein 205 		ENST00000354882 (TMEM205-004) 11342778-11346046 protein_coding
ENST00000447337 (TMEM205-201) 11342776-11346305 protein_coding
ENST00000585722 (TMEM205-005) 11342778-11346055 retained_intron
ENST00000586218 (TMEM205-011) 11342776-11346210 protein_coding
ENST00000586590 (TMEM205-002) 11342778-11346268 protein_coding
ENST00000586701 (TMEM205-014) 11342842-11346327 protein_coding
ENST00000586956 (TMEM205-009) 11342778-11346285 protein_coding
ENST00000587948 (TMEM205-013) 11342779-11346406 protein_coding
ENST00000588321 (TMEM205-006) 11342810-11346256 retained_intron
ENST00000588560 (TMEM205-003) 11342785-11346248 protein_coding
ENST00000589555 (TMEM205-010) 11342779-11346271 protein_coding
ENST00000590482 (TMEM205-012) 11342873-11346518 protein_coding
ENST00000590788 (TMEM205-016) 11345252-11346262 protein_coding
ENST00000591677 (TMEM205-008) 11343064-11346305 protein_coding
ENST00000592952 (TMEM205-015) 11342850-11346255 protein_coding
ENST00000593256 (TMEM205-001) 11342776-11346300 protein_coding
ENSG00000105520 (LPPR2)
Lipid phosphate phosphatase-related protein type 2 		ENST00000251473 (LPPR2-001) 11355386-11365698 protein_coding
ENST00000586380 (LPPR2-006) 11355466-11359838 protein_coding
ENST00000586431 (LPPR2-005) 11355431-11359708 processed_transcript
ENST00000587801 (LPPR2-008) 11359723-11363768 retained_intron
ENST00000588196 (LPPR2-007) 11357696-11359894 retained_intron
ENST00000588360 (LPPR2-009) 11361266-11364215 retained_intron
ENST00000591329 (LPPR2-004) 11355424-11359719 protein_coding
ENST00000591608 (LPPR2-002) 11355498-11365694 protein_coding
ENSG00000183401 (CCDC159)
coiled-coil domain containing 159 		ENST00000458408 (CCDC159-201) 11346505-11354943 protein_coding
ENST00000586451 (CCDC159-006) 11346533-11351973 protein_coding
ENST00000586479 (CCDC159-017) 11351748-11353749 processed_transcript
ENST00000587100 (CCDC159-008) 11344695-11346466 processed_transcript
ENST00000587531 (CCDC159-012) 11346556-11350979 protein_coding
ENST00000587868 (CCDC159-021) 11350885-11354699 retained_intron
ENST00000588464 (CCDC159-016) 11351793-11353737 retained_intron
ENST00000588592 (CCDC159-011) 11346540-11351940 protein_coding
ENST00000588790 (CCDC159-001) 11345301-11354944 protein_coding
ENST00000588821 (CCDC159-004) 11346531-11351486 retained_intron
ENST00000589016 (CCDC159-005) 11346565-11351486 retained_intron
ENST00000589022 (CCDC159-018) 11351932-11354944 retained_intron
ENST00000589186 (CCDC159-009) 11344684-11346298 processed_transcript
ENST00000589477 (CCDC159-015) 11346581-11349693 retained_intron
ENST00000590054 (CCDC159-003) 11346531-11352499 retained_intron
ENST00000590636 (CCDC159-013) 11346572-11350989 nonsense_mediated_decay
ENST00000590919 (CCDC159-010) 11346505-11350868 nonsense_mediated_decay
ENST00000591260 (CCDC159-020) 11349663-11354681 protein_coding
ENST00000591691 (CCDC159-019) 11351962-11354943 protein_coding
ENST00000592723 (CCDC159-014) 11346540-11353827 nonsense_mediated_decay
CIL_0003SY_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000006241-ENSMUSG00000040563 CGP 10090 9:21927471-21948907
GeneTranscriptPositionBiotype
ENSMUSG00000006241 (Ccdc159)
coiled-coil domain containing 159 		ENSMUST00000006403 (Ccdc159-201) 21927471-21935872 protein_coding
ENSMUST00000170304 (Ccdc159-202) 21927471-21935872 protein_coding
ENSMUSG00000040563 (BC018242)
lipid phosphate phosphatase-related protein type 2 		ENSMUST00000046371 (BC018242-001) 21937033-21948904 protein_coding
ENSMUST00000188468 (BC018242-003) 21938453-21948017 protein_coding
ENSMUST00000190387 (BC018242-002) 21938274-21948907 protein_coding
ENSMUSG00000040883 (Tmem205)
transmembrane protein 205 		ENSMUST00000046831 (Tmem205-201) 21921010-21927535 protein_coding
ENSMUST00000178988 (Tmem205-202) 21921010-21927535 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003SY_0001ENSG00000105514ENST00000222120ENST00000589655ENSG00000105518ENST00000354882ENST00000447337ENST00000585722ENST00000586218ENST00000586590ENST00000586701ENST00000586956ENST00000587948ENST00000588321ENST00000588560ENST00000589555ENST00000590482ENST00000590788ENST00000591677ENST00000592952ENST00000593256ENSG00000105520ENST00000251473ENST00000586380ENST00000586431ENST00000587801ENST00000588196ENST00000588360ENST00000591329ENST00000591608ENSG00000183401ENST00000458408ENST00000586451ENST00000586479ENST00000587100ENST00000587531ENST00000587868ENST00000588464ENST00000588592ENST00000588790ENST00000588821ENST00000589016ENST00000589022ENST00000589186ENST00000589477ENST00000590054ENST00000590636ENST00000590919ENST00000591260ENST00000591691ENST00000592723CIL_0003SY_0002ENSMUSG00000006241ENSMUST00000006403ENSMUST00000170304ENSMUSG00000040563ENSMUST00000046371ENSMUST00000188468ENSMUST00000190387ENSMUSG00000040883ENSMUST00000046831ENSMUST00000178988
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003SY_0001ENSG00000105514ENST00000222120ENSG00000105518ENST00000354882ENST00000588560ENST00000589555ENST00000590482ENST00000593256ENSG00000105520ENST00000251473ENST00000586431ENST00000587801ENST00000591329ENST00000591608ENSG00000183401ENST00000458408ENST00000589186CIL_0003SY_0002ENSMUSG00000006241ENSMUST00000006403ENSMUST00000170304ENSMUSG00000040563ENSMUST00000046371ENSMUST00000188468ENSMUST00000190387ENSMUSG00000040883ENSMUST00000046831ENSMUST00000178988
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000105514 ENST00000222120 5.279±0.00 4.846±0.00 0.923±0.00 2.881±1.52 5.010±2.45 5.126±4.50 1.962±0.00 6.057±0.00 1.419±0.00 2.556±0.76 N/A 6.447±2.79 5.665±1.64 8.422±0.00
ENST00000589655 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000105518 ENST00000354882 N/A N/A N/A 13.876±5.40 N/A 2.690±0.00 1.469±0.00 N/A 5.362±0.00 N/A N/A 19.819±0.00 N/A N/A
ENST00000447337 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000585722 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586218 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586590 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586701 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586956 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587948 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588321 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588560 N/A N/A N/A N/A N/A N/A N/A 13.437±0.00 N/A N/A N/A N/A N/A N/A
ENST00000589555 N/A 26.608±0.00 5.550±0.00 28.295±0.00 N/A N/A 15.073±0.00 N/A N/A 34.012±0.00 15.903±0.00 N/A N/A N/A
ENST00000590482 N/A 45.228±0.00 N/A 10.651±0.00 57.335±0.00 N/A 21.914±0.00 49.830±0.00 74.645±0.00 N/A 25.284±0.00 N/A N/A N/A
ENST00000590788 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591677 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592952 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000593256 N/A N/A 7.048±0.00 N/A N/A N/A 10.670±8.79 33.789±11.19 55.020±0.00 5.475±0.00 18.696±2.30 36.374±21.23 59.674±20.71 N/A
ENSG00000105520 ENST00000251473 10.493±0.00 11.139±0.00 N/A 6.691±2.32 6.843±0.00 5.193±0.00 1.873±1.72 3.142±2.75 5.674±0.00 6.036±0.00 6.077±4.63 14.264±12.24 7.113±2.17 6.998±6.43
ENST00000586380 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586431 N/A N/A 0.237±0.00 N/A N/A 0.277±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587801 N/A N/A N/A N/A N/A N/A N/A 0.889±0.00 N/A N/A N/A N/A N/A N/A
ENST00000588196 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588360 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591329 N/A N/A N/A N/A N/A N/A N/A 1.246±0.00 N/A N/A N/A N/A N/A N/A
ENST00000591608 5.535±0.00 2.090±0.00 0.342±0.00 1.947±1.26 3.847±0.00 0.995±0.84 N/A 4.922±0.00 0.737±0.00 0.339±0.00 4.668±0.00 6.259±4.03 7.828±1.50 5.829±0.00
ENSG00000183401 ENST00000458408 N/A N/A N/A N/A N/A N/A 1.329±0.00 N/A N/A N/A N/A N/A 6.152±0.00 25.092±0.00
ENST00000586451 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586479 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587100 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587531 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587868 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588464 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588592 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588790 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588821 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589016 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589022 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589186 36.913±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 16.152±0.00 N/A N/A N/A
ENST00000589477 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590054 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590636 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590919 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591260 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591691 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592723 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000006241 ENSMUST00000006403 N/A N/A 2.487±0.26 3.183±0.61 N/A N/A N/A N/A N/A N/A 0.500±0.00 4.713±0.00 0.453±0.00 20.972±2.59
ENSMUST00000170304 N/A N/A N/A 2.286±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 11.391±0.60
ENSMUSG00000040563 ENSMUST00000046371 4.811±1.02 17.125±2.63 5.999±0.26 36.613±16.59 2.866±1.67 2.461±0.63 1.233±0.78 1.146±0.49 2.314±0.99 2.073±0.23 0.464±0.10 4.600±1.10 0.598±0.35 7.195±0.67
ENSMUST00000188468 N/A 7.295±0.52 N/A N/A 1.786±0.00 1.572±0.00 N/A N/A 1.186±0.34 1.437±0.05 0.174±0.00 3.454±0.92 N/A N/A
ENSMUST00000190387 2.197±0.15 8.360±2.24 2.197±0.12 12.365±7.47 2.923±0.92 1.510±0.40 0.584±0.20 0.449±0.00 1.309±0.57 1.436±0.31 0.275±0.11 3.203±0.99 0.368±0.12 9.077±0.60
ENSMUSG00000040883 ENSMUST00000046831 85.639±35.48 540.064±32.82 32.166±3.13 8.429±3.99 68.369±21.75 52.009±2.40 37.788±9.71 100.150±8.02 318.808±270.11 67.876±7.66 5.859±1.74 50.289±20.36 10.399±10.24 91.443±42.17
ENSMUST00000178988 18.902±7.73 127.449±10.03 11.919±1.59 N/A 19.321±5.52 12.459±2.03 8.488±2.68 26.659±1.85 99.352±87.04 17.102±2.98 2.245±0.76 14.627±4.65 5.734±4.98 23.640±10.09

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