C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003T5_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000039757-ENSDARG00000074760 CGP 7955 13:8047095-8119133
GeneTranscriptPositionBiotype
ENSDARG00000039757 (mcfd2)
multiple coagulation factor deficiency 2 		ENSDART00000058107 (mcfd2-001) 8047095-8056317 protein_coding
ENSDARG00000074760 (ttc7a)
tetratricopeptide repeat domain 7A 		ENSDART00000109059 (ttc7a-201) 8056936-8119133 protein_coding
ENSDART00000138448 (ttc7a-001) 8056867-8119133 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0003T5_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000180398-ENSG00000068724 CGP 9606 2:46901870-47076137
GeneTranscriptPositionBiotype
ENSG00000068724 (TTC7A)
tetratricopeptide repeat domain 7A 		ENST00000319190 (TTC7A-001) 46941174-47076135 protein_coding
ENST00000394850 (TTC7A-002) 46941286-47075324 protein_coding
ENST00000409245 (TTC7A-005) 46916157-47074048 protein_coding
ENST00000409825 (TTC7A-006) 46950421-47076137 nonsense_mediated_decay
ENST00000440051 (TTC7A-010) 47005932-47049980 nonsense_mediated_decay
ENST00000441914 (TTC7A-004) 46941543-47073923 nonsense_mediated_decay
ENST00000461601 (TTC7A-003) 46941275-47050025 processed_transcript
ENST00000474321 (TTC7A-009) 46978118-47005994 processed_transcript
ENST00000484061 (TTC7A-008) 46994231-47075324 retained_intron
ENST00000484337 (TTC7A-011) 47034155-47060956 processed_transcript
ENST00000491786 (TTC7A-007) 46978740-47075557 retained_intron
ENST00000496991 (TTC7A-012) 47046315-47050827 processed_transcript
ENSG00000180398 (MCFD2)
multiple coagulation factor deficiency 2 		ENST00000319466 (MCFD2-001) 46901874-46915868 protein_coding
ENST00000409105 (MCFD2-002) 46901874-46915780 protein_coding
ENST00000409147 (MCFD2-010) 46905368-46941855 protein_coding
ENST00000409207 (MCFD2-003) 46904958-46941732 protein_coding
ENST00000409218 (MCFD2-005) 46905394-46916112 protein_coding
ENST00000409800 (MCFD2-008) 46901874-46916054 protein_coding
ENST00000409913 (MCFD2-009) 46901874-46915816 protein_coding
ENST00000409973 (MCFD2-004) 46905271-46915810 protein_coding
ENST00000412438 (MCFD2-006) 46905466-46914118 protein_coding
ENST00000417180 (MCFD2-007) 46907935-46914074 protein_coding
ENST00000434262 (MCFD2-011) 46905817-46909072 protein_coding
ENST00000444761 (MCFD2-201) 46901870-46941855 protein_coding
ENST00000470873 (MCFD2-015) 46905245-46941773 processed_transcript
ENST00000477791 (MCFD2-014) 46907529-46915791 retained_intron
ENST00000479225 (MCFD2-012) 46907700-46941714 retained_intron
ENST00000487121 (MCFD2-013) 46908707-46941727 retained_intron
ENST00000493804 (MCFD2-016) 46904855-46915789 processed_transcript
ENSG00000233845 (AC093732.1)
 ENST00000422201 (AC093732.1-001) 47035279-47040524 antisense

Homo sapiens Ensembl (GRCh38)

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CIL_0003T5_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000024150-ENSMUSG00000036918 CGP 10090 17:87254658-87381769
GeneTranscriptPositionBiotype
ENSMUSG00000024150 (Mcfd2)
multiple coagulation factor deficiency 2 		ENSMUST00000024963 (Mcfd2-001) 87254658-87265935 protein_coding
ENSMUST00000129616 (Mcfd2-005) 87255788-87265880 protein_coding
ENSMUST00000139258 (Mcfd2-006) 87258783-87265863 processed_transcript
ENSMUST00000144236 (Mcfd2-002) 87254660-87265904 protein_coding
ENSMUST00000145895 (Mcfd2-007) 87256758-87265874 protein_coding
ENSMUST00000151155 (Mcfd2-003) 87255970-87265895 protein_coding
ENSMUST00000155904 (Mcfd2-004) 87257231-87265880 protein_coding
ENSMUSG00000036918 (Ttc7)
tetratricopeptide repeat domain 7 		ENSMUST00000041110 (Ttc7-001) 87282886-87381769 protein_coding
ENSMUST00000125875 (Ttc7-002) 87282905-87371904 protein_coding
ENSMUST00000126497 (Ttc7-003) 87282893-87292929 processed_transcript
ENSMUST00000127970 (Ttc7-004) 87309332-87330077 processed_transcript
ENSMUST00000144204 (Ttc7-008) 87282951-87361921 nonsense_mediated_decay
ENSMUST00000148126 (Ttc7-007) 87378853-87381769 processed_transcript
ENSMUST00000148554 (Ttc7-006) 87330214-87339949 processed_transcript
ENSMUST00000153014 (Ttc7-005) 87323068-87334273 retained_intron
ENSMUST00000154255 (Ttc7-009) 87292811-87380086 nonsense_mediated_decay
ENSMUSG00000085287 (4833418N02Rik)
RIKEN cDNA 4833418N02 gene 		ENSMUST00000137539 (4833418N02Rik-001) 87274886-87281693 lincRNA
ENSMUST00000146560 (4833418N02Rik-002) 87274921-87282814 lincRNA
ENSMUST00000160917 (4833418N02Rik-004) 87275247-87282500 lincRNA
ENSMUST00000161759 (4833418N02Rik-003) 87280258-87282779 lincRNA
ENSMUSG00000089755 (0610012D04Rik)
RIKEN cDNA 0610012D04 gene 		ENSMUST00000159031 (0610012D04Rik-001) 87362239-87364462 antisense

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003T5_0001ENSDARG00000039757ENSDART00000058107ENSDARG00000074760ENSDART00000109059ENSDART00000138448CIL_0003T5_0002ENSG00000068724ENST00000319190ENST00000394850ENST00000409245ENST00000409825ENST00000440051ENST00000441914ENST00000461601ENST00000474321ENST00000484061ENST00000484337ENST00000491786ENST00000496991ENSG00000180398ENST00000319466ENST00000409105ENST00000409147ENST00000409207ENST00000409218ENST00000409800ENST00000409913ENST00000409973ENST00000412438ENST00000417180ENST00000434262ENST00000444761ENST00000470873ENST00000477791ENST00000479225ENST00000487121ENST00000493804ENSG00000233845ENST00000422201CIL_0003T5_0003ENSMUSG00000024150ENSMUST00000024963ENSMUST00000129616ENSMUST00000139258ENSMUST00000144236ENSMUST00000145895ENSMUST00000151155ENSMUST00000155904ENSMUSG00000036918ENSMUST00000041110ENSMUST00000125875ENSMUST00000126497ENSMUST00000127970ENSMUST00000144204ENSMUST00000148126ENSMUST00000148554ENSMUST00000153014ENSMUST00000154255ENSMUSG00000085287ENSMUST00000137539ENSMUST00000146560ENSMUST00000160917ENSMUST00000161759ENSMUSG00000089755ENSMUST00000159031
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003T5_0001ENSDARG00000039757ENSDART00000058107ENSDARG00000074760ENSDART00000109059ENSDART00000138448CIL_0003T5_0002ENSG00000068724ENST00000319190ENST00000394850ENST00000461601ENSG00000180398ENST00000319466ENST00000409800ENST00000409913ENSG00000233845ENST00000422201CIL_0003T5_0003ENSMUSG00000024150ENSMUST00000024963ENSMUST00000129616ENSMUST00000139258ENSMUST00000144236ENSMUST00000151155ENSMUSG00000036918ENSMUST00000041110ENSMUST00000125875ENSMUST00000126497ENSMUST00000144204ENSMUST00000148126ENSMUST00000154255ENSMUSG00000085287ENSMUST00000137539ENSMUST00000146560ENSMUST00000160917ENSMUST00000161759ENSMUSG00000089755ENSMUST00000159031
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000039757 ENSDART00000058107 N/A N/A N/A 9.521±0.40 N/A N/A 8.306±1.43 21.556±2.95 3.910±0.00 N/A 2.841±0.00 N/A N/A N/A
ENSDARG00000074760 ENSDART00000109059 N/A N/A N/A 0.612±0.00 N/A N/A 0.815±0.06 3.182±0.00 0.443±0.00 N/A 0.480±0.00 N/A N/A N/A
ENSDART00000138448 N/A N/A N/A 0.421±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000068724 ENST00000319190 N/A 8.658±0.00 N/A N/A N/A N/A N/A 8.315±0.00 N/A 11.974±0.00 N/A 9.545±0.00 8.417±1.80 13.309±0.00
ENST00000394850 N/A N/A 2.459±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000409245 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000409825 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000440051 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000441914 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000461601 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 32.494±0.00
ENST00000474321 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484061 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484337 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491786 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496991 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000180398 ENST00000319466 24.323±0.00 21.245±0.00 N/A 12.480±6.33 18.422±6.50 13.419±6.02 5.089±1.66 18.139±0.53 20.663±12.54 17.075±8.49 16.699±0.00 21.278±11.16 27.125±3.47 23.560±9.27
ENST00000409105 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000409147 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000409207 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000409218 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000409800 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.381±0.00 N/A N/A N/A
ENST00000409913 N/A N/A N/A 7.322±1.62 N/A N/A 5.839±4.14 N/A 3.803±1.50 5.676±0.00 5.274±0.00 8.829±3.92 N/A N/A
ENST00000409973 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000412438 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000417180 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000434262 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000444761 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470873 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477791 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479225 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487121 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493804 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000233845 ENST00000422201 N/A 0.140±0.00 N/A 0.424±0.00 N/A 0.269±0.00 N/A N/A N/A 0.198±0.06 N/A 0.523±0.52 0.110±0.01 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024150 ENSMUST00000024963 33.084±5.28 66.836±5.38 36.816±3.41 13.286±1.63 26.885±6.67 37.996±3.50 15.936±4.47 42.009±7.26 61.769±27.19 31.625±7.14 10.987±2.64 48.094±14.10 37.763±24.26 9.472±2.25
ENSMUST00000129616 N/A N/A N/A 17.948±0.00 N/A N/A 6.291±0.00 N/A N/A N/A N/A 22.147±3.70 N/A 7.104±0.66
ENSMUST00000139258 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 11.645±0.00
ENSMUST00000144236 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.503±0.16 7.708±0.00 N/A N/A
ENSMUST00000145895 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151155 N/A 39.863±4.84 N/A N/A N/A N/A N/A N/A 37.639±0.00 N/A N/A 24.087±0.14 N/A N/A
ENSMUST00000155904 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000036918 ENSMUST00000041110 4.836±1.83 2.671±0.72 4.555±0.75 1.100±0.53 9.425±2.45 18.540±1.67 1.358±0.22 14.616±1.74 6.692±2.23 12.513±0.56 1.158±0.10 3.391±0.98 4.334±0.89 9.954±4.30
ENSMUST00000125875 N/A N/A N/A N/A 2.069±0.00 N/A N/A N/A N/A N/A 1.022±0.27 0.457±0.00 2.901±1.85 N/A
ENSMUST00000126497 N/A 10.640±2.38 N/A N/A 23.889±1.35 16.279±1.80 N/A N/A 5.949±0.00 13.844±0.00 N/A 10.073±1.96 N/A N/A
ENSMUST00000127970 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144204 N/A N/A N/A 0.601±0.12 N/A N/A N/A N/A N/A N/A N/A N/A 1.288±0.00 11.248±1.37
ENSMUST00000148126 3.981±0.55 4.019±0.91 N/A 0.569±0.08 9.795±1.12 11.010±1.06 3.904±0.80 10.888±0.92 4.962±1.41 7.189±0.18 2.617±0.54 2.723±0.89 5.589±0.55 N/A
ENSMUST00000148554 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153014 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154255 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.876±0.00
ENSMUSG00000085287 ENSMUST00000137539 0.441±0.00 N/A N/A 0.402±0.35 N/A N/A N/A 0.248±0.00 0.419±0.12 0.681±0.00 0.480±0.05 0.311±0.00 0.263±0.11 1.997±0.00
ENSMUST00000146560 N/A 1.925±0.56 N/A 0.252±0.00 0.749±0.38 1.061±0.21 N/A 0.678±0.18 0.674±0.41 0.529±0.10 0.742±0.00 1.416±0.55 0.352±0.10 N/A
ENSMUST00000160917 N/A N/A N/A 0.422±0.00 N/A N/A N/A N/A 0.717±0.00 N/A N/A 1.238±0.00 N/A 4.276±0.00
ENSMUST00000161759 N/A 1.027±0.38 N/A 1.431±0.00 0.941±0.17 1.023±0.53 N/A 0.717±0.23 0.788±0.37 1.296±0.10 1.077±0.12 1.813±0.24 0.319±0.18 N/A
ENSMUSG00000089755 ENSMUST00000159031 0.130±0.04 N/A 0.072±0.01 0.078±0.00 0.850±0.54 N/A 0.280±0.13 0.202±0.09 0.100±0.00 0.275±0.08 0.684±0.26 0.214±0.10 0.579±0.00 0.448±0.00

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