C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003TV_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000159086-ENSG00000205929 CGP 9606 21:32733899-32813743
GeneTranscriptPositionBiotype
ENSG00000159086 (PAXBP1)
PAX3 and PAX7 binding protein 1 		ENST00000290178 (PAXBP1-005) 32741393-32771668 protein_coding
ENST00000331923 (PAXBP1-001) 32733899-32771858 protein_coding
ENST00000421049 (PAXBP1-008) 32748559-32755311 nonsense_mediated_decay
ENST00000443785 (PAXBP1-006) 32734820-32771687 nonsense_mediated_decay
ENST00000445049 (PAXBP1-009) 32741419-32743268 nonsense_mediated_decay
ENST00000464256 (PAXBP1-007) 32759402-32771792 retained_intron
ENST00000466846 (PAXBP1-002) 32733900-32756794 retained_intron
ENST00000472588 (PAXBP1-004) 32756342-32771668 processed_transcript
ENST00000497873 (PAXBP1-003) 32734826-32752124 retained_intron
ENSG00000205929 (C21orf62)
chromosome 21 open reading frame 62 		ENST00000382373 (C21orf62-004) 32793685-32813689 protein_coding
ENST00000479548 (C21orf62-002) 32793721-32813634 protein_coding
ENST00000487113 (C21orf62-003) 32793565-32813679 protein_coding
ENST00000490358 (C21orf62-001) 32793564-32813743 protein_coding
ENST00000536776 (C21orf62-201) 32790674-32807718 protein_coding
ENSG00000205930 (C21orf49)
C21orf62 antisense RNA 1 		ENST00000382375 (C21orf49-001) 32772100-32798969 lincRNA
ENST00000382377 (C21orf49-002) 32772125-32797707 lincRNA
ENST00000382378 (C21orf49-005) 32772162-32797168 lincRNA
ENST00000454365 (C21orf49-007) 32772150-32893735 lincRNA
ENST00000477513 (C21orf49-006) 32772188-32797094 lincRNA
ENST00000491756 (C21orf49-003) 32772174-32797446 lincRNA
ENST00000612326 (C21orf49-004) 32772161-32852470 lincRNA
ENSG00000238197 (PAXBP1-AS1)
PAXBP1 antisense RNA 1 		ENST00000440052 (PAXBP1-AS1-002) 32728139-32743122 antisense
ENST00000455170 (PAXBP1-AS1-003) 32730352-32737473 antisense
ENST00000458479 (PAXBP1-AS1-001) 32728115-32732916 antisense
ENSG00000279690 (AP000280.66)
 ENST00000624800 (AP000280.66-001) 32790673-32791504 TEC
CIL_0003TV_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000022974-ENSMUSG00000039851 CGP 10090 16:91014037-91095122
GeneTranscriptPositionBiotype
ENSMUSG00000022974 (Paxbp1)
PAX3 and PAX7 binding protein 1 		ENSMUST00000023698 (Paxbp1-002) 91014916-91044164 nonsense_mediated_decay
ENSMUST00000118522 (Paxbp1-001) 91014037-91044543 protein_coding
ENSMUST00000124653 (Paxbp1-004) 91030449-91034892 retained_intron
ENSMUST00000127002 (Paxbp1-007) 91031564-91044354 processed_transcript
ENSMUST00000128922 (Paxbp1-005) 91025675-91027638 retained_intron
ENSMUST00000145136 (Paxbp1-008) 91025556-91030514 nonsense_mediated_decay
ENSMUST00000146281 (Paxbp1-003) 91024811-91030816 retained_intron
ENSMUST00000150397 (Paxbp1-006) 91016849-91019231 processed_transcript
ENSMUSG00000039851 (4932438H23Rik)
RIKEN cDNA 4932438H23 gene 		ENSMUST00000035689 (4932438H23Rik-001) 91053935-91069145 protein_coding
ENSMUST00000114076 (4932438H23Rik-002) 91053935-91069145 protein_coding
ENSMUST00000146047 (4932438H23Rik-003) 91055838-91095122 protein_coding
ENSMUSG00000085398 (4931406G06Rik)
RIKEN cDNA 4931406G06 gene 		ENSMUST00000147848 (4931406G06Rik-001) 91044656-91056677 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003TV_0001ENSG00000159086ENST00000290178ENST00000331923ENST00000421049ENST00000443785ENST00000445049ENST00000464256ENST00000466846ENST00000472588ENST00000497873ENSG00000205929ENST00000382373ENST00000479548ENST00000487113ENST00000490358ENST00000536776ENSG00000205930ENST00000382375ENST00000382377ENST00000382378ENST00000454365ENST00000477513ENST00000491756ENST00000612326ENSG00000238197ENST00000440052ENST00000455170ENST00000458479ENSG00000279690ENST00000624800CIL_0003TV_0002ENSMUSG00000022974ENSMUST00000023698ENSMUST00000118522ENSMUST00000124653ENSMUST00000127002ENSMUST00000128922ENSMUST00000145136ENSMUST00000146281ENSMUST00000150397ENSMUSG00000039851ENSMUST00000035689ENSMUST00000114076ENSMUST00000146047ENSMUSG00000085398ENSMUST00000147848
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003TV_0001ENSG00000159086ENST00000290178ENST00000331923ENST00000443785ENST00000464256ENST00000466846ENST00000472588ENST00000497873ENSG00000205929ENST00000382373ENST00000479548ENST00000490358ENST00000536776ENSG00000205930ENST00000382375ENST00000382377ENST00000382378ENST00000454365ENST00000477513ENST00000491756ENST00000612326ENSG00000238197ENST00000440052ENSG00000279690ENST00000624800CIL_0003TV_0002ENSMUSG00000022974ENSMUST00000023698ENSMUST00000118522ENSMUST00000127002ENSMUSG00000039851ENSMUST00000035689ENSMUST00000114076ENSMUST00000146047ENSMUSG00000085398ENSMUST00000147848
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000159086 ENST00000290178 N/A N/A N/A 1.518±0.00 N/A N/A N/A N/A N/A N/A 1.032±0.16 N/A 0.882±0.00 7.438±0.00
ENST00000331923 N/A 2.479±0.00 N/A 2.546±0.00 1.026±0.00 3.224±0.00 1.413±0.00 3.854±0.00 1.950±0.00 1.721±0.37 0.884±0.64 5.580±3.85 1.210±0.32 3.858±0.46
ENST00000421049 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000443785 N/A N/A N/A N/A 2.041±0.00 N/A 0.425±0.00 N/A 1.252±0.00 N/A N/A 3.624±0.00 0.455±0.00 N/A
ENST00000445049 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464256 N/A N/A 4.181±0.00 1.834±0.00 N/A N/A N/A 1.511±0.00 1.333±0.00 N/A N/A 7.669±0.00 N/A N/A
ENST00000466846 0.729±0.00 2.097±0.00 0.723±0.00 1.517±0.53 1.627±0.61 1.200±0.57 0.637±0.28 0.683±0.00 0.711±0.00 0.979±0.37 0.475±0.00 1.618±0.44 0.258±0.00 2.191±0.86
ENST00000472588 N/A N/A 1.234±0.00 N/A N/A 2.295±0.00 N/A N/A 2.252±0.00 N/A N/A N/A 1.643±0.00 5.816±0.00
ENST00000497873 N/A N/A N/A N/A 2.339±0.00 N/A N/A N/A N/A 2.402±0.00 N/A N/A N/A N/A
ENSG00000205929 ENST00000382373 N/A N/A 0.453±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479548 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.103±0.02 N/A
ENST00000487113 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490358 N/A N/A N/A 0.154±0.00 N/A 0.080±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000536776 0.056±0.00 0.242±0.00 N/A 0.444±0.00 0.144±0.01 0.072±0.00 0.032±0.00 0.009±0.00 0.083±0.00 0.064±0.00 0.018±0.00 N/A 0.026±0.01 0.140±0.00
ENSG00000205930 ENST00000382375 0.020±0.00 0.535±0.00 0.072±0.00 N/A N/A 0.203±0.00 0.066±0.03 0.130±0.02 0.115±0.00 N/A N/A 0.118±0.00 0.047±0.03 0.440±0.01
ENST00000382377 0.083±0.00 N/A N/A 0.375±0.00 0.174±0.00 N/A 0.101±0.00 0.275±0.00 0.165±0.00 0.188±0.00 0.261±0.00 0.485±0.00 0.158±0.02 N/A
ENST00000382378 0.243±0.00 N/A N/A N/A 0.224±0.00 1.064±0.00 0.141±0.00 0.385±0.00 0.290±0.23 N/A N/A 0.523±0.21 0.057±0.00 0.757±0.00
ENST00000454365 N/A N/A N/A 0.744±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.528±0.00
ENST00000477513 N/A N/A 0.105±0.00 N/A N/A N/A N/A N/A 0.055±0.00 N/A N/A 0.325±0.00 N/A N/A
ENST00000491756 N/A N/A N/A N/A N/A N/A N/A 0.103±0.00 N/A N/A 0.224±0.00 N/A 0.052±0.00 N/A
ENST00000612326 N/A N/A N/A N/A N/A 0.148±0.00 0.056±0.00 N/A N/A N/A N/A 0.292±0.17 0.041±0.00 0.594±0.30
ENSG00000238197 ENST00000440052 N/A N/A N/A 1.598±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000455170 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000458479 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000279690 ENST00000624800 N/A N/A N/A N/A N/A N/A N/A 3.158±0.00 N/A 0.408±0.00 N/A 1.551±0.30 N/A 0.446±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022974 ENSMUST00000023698 N/A N/A 8.919±0.73 N/A 5.222±0.00 N/A 1.773±0.00 N/A 10.700±3.22 N/A 2.239±0.38 18.678±2.22 11.648±5.25 7.288±2.55
ENSMUST00000118522 3.885±0.12 5.403±1.72 3.775±0.00 13.603±0.00 4.849±1.63 5.943±1.64 2.131±0.41 2.469±0.47 5.477±5.08 6.765±1.49 1.014±0.19 8.264±3.15 5.483±0.63 5.586±0.60
ENSMUST00000124653 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000127002 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 24.704±0.00 N/A 38.547±0.00
ENSMUST00000128922 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145136 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146281 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150397 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000039851 ENSMUST00000035689 0.219±0.13 N/A N/A 0.058±0.00 0.141±0.03 0.322±0.00 N/A 0.045±0.02 0.027±0.01 0.040±0.00 N/A 0.355±0.25 0.010±0.00 4.214±2.55
ENSMUST00000114076 0.125±0.02 0.038±0.00 N/A 0.159±0.00 0.090±0.07 0.315±0.00 0.042±0.02 0.048±0.01 0.017±0.01 0.060±0.03 0.023±0.01 N/A 0.062±0.00 2.721±0.16
ENSMUST00000146047 N/A N/A N/A N/A N/A 0.941±0.43 N/A 0.214±0.05 0.015±0.00 0.156±0.06 0.030±0.00 1.250±0.95 0.086±0.00 7.624±1.12
ENSMUSG00000085398 ENSMUST00000147848 N/A N/A N/A N/A 0.108±0.04 0.292±0.02 N/A 0.031±0.00 0.013±0.01 0.039±0.00 N/A 0.360±0.13 0.055±0.00 N/A

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