C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003W0_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000150527-ENSG00000165355 CGP 9606 14:39265284-39432500
GeneTranscriptPositionBiotype
ENSG00000150527 (CTAGE5)
CTAGE family, member 5 		ENST00000280083 (CTAGE5-002) 39267146-39351395 protein_coding
ENST00000341502 (CTAGE5-015) 39267246-39388513 protein_coding
ENST00000341749 (CTAGE5-001) 39265292-39350694 protein_coding
ENST00000348007 (CTAGE5-003) 39267414-39350694 protein_coding
ENST00000396158 (CTAGE5-201) 39267124-39351193 protein_coding
ENST00000396165 (CTAGE5-004) 39265968-39350423 protein_coding
ENST00000553352 (CTAGE5-005) 39276226-39350645 protein_coding
ENST00000553383 (CTAGE5-013) 39347545-39350645 processed_transcript
ENST00000554392 (CTAGE5-010) 39265284-39293311 protein_coding
ENST00000555716 (CTAGE5-014) 39265291-39294072 protein_coding
ENST00000556148 (CTAGE5-006) 39267411-39350421 protein_coding
ENST00000556593 (CTAGE5-012) 39313401-39315302 retained_intron
ENST00000556990 (CTAGE5-011) 39267086-39294053 processed_transcript
ENST00000557038 (CTAGE5-007) 39265309-39350690 protein_coding
ENSG00000165355 (FBXO33)
F-box protein 33 		ENST00000298097 (FBXO33-001) 39397669-39432500 protein_coding
ENST00000554190 (FBXO33-002) 39399566-39431875 protein_coding
ENST00000554932 (FBXO33-003) 39431772-39432466 protein_coding
ENSG00000258941 (RP11-407N17.3)
cTAGE family member 5 {ECO:0000313|Ensembl:ENSP00000452252} 		ENST00000553728 (RP11-407N17.3-001) 39233902-39350423 protein_coding
ENSG00000271424 (RP11-647O20.1)
 ENST00000604758 (RP11-647O20.1-001) 39370279-39370756 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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CIL_0003W0_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000021000-ENSMUSG00000035329 CGP 10090 12:59129720-59219725
GeneTranscriptPositionBiotype
ENSMUSG00000021000 (Ctage5)
CTAGE family, member 5 		ENSMUST00000069430 (Ctage5-001) 59129763-59190176 protein_coding
ENSMUST00000170992 (Ctage5-007) 59131453-59190173 protein_coding
ENSMUST00000175659 (Ctage5-015) 59166790-59175509 retained_intron
ENSMUST00000175685 (Ctage5-020) 59179513-59188519 retained_intron
ENSMUST00000175803 (Ctage5-016) 59131481-59144975 retained_intron
ENSMUST00000175837 (Ctage5-021) 59162890-59184297 nonsense_mediated_decay
ENSMUST00000175877 (Ctage5-010) 59130837-59190222 protein_coding
ENSMUST00000175912 (Ctage5-003) 59129720-59190176 protein_coding
ENSMUST00000176223 (Ctage5-019) 59168988-59171053 retained_intron
ENSMUST00000176322 (Ctage5-008) 59131467-59189952 protein_coding
ENSMUST00000176336 (Ctage5-013) 59136109-59189952 nonsense_mediated_decay
ENSMUST00000176464 (Ctage5-011) 59131286-59191583 protein_coding
ENSMUST00000176617 (Ctage5-014) 59149511-59189952 nonsense_mediated_decay
ENSMUST00000176727 (Ctage5-005) 59129810-59168945 nonsense_mediated_decay
ENSMUST00000176752 (Ctage5-004) 59129785-59190222 nonsense_mediated_decay
ENSMUST00000176892 (Ctage5-002) 59129746-59190173 protein_coding
ENSMUST00000177162 (Ctage5-012) 59131502-59190222 protein_coding
ENSMUST00000177222 (Ctage5-018) 59168859-59189640 retained_intron
ENSMUST00000177225 (Ctage5-006) 59130377-59189950 protein_coding
ENSMUST00000177370 (Ctage5-017) 59129765-59149538 protein_coding
ENSMUST00000177460 (Ctage5-009) 59131022-59146872 protein_coding
ENSMUSG00000035329 (Fbxo33)
F-box protein 33 		ENSMUST00000043204 (Fbxo33-001) 59200655-59219725 protein_coding
ENSMUST00000160204 (Fbxo33-002) 59200658-59205689 retained_intron
ENSMUST00000161351 (Fbxo33-003) 59204552-59218801 protein_coding
ENSMUST00000162855 (Fbxo33-004) 59200657-59204436 protein_coding
ENSMUSG00000077505 (Gm24233)
predicted gene, 24233 		ENSMUST00000104317 (Gm24233-201) 59134072-59134193 snoRNA

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003W0_0001ENSG00000150527ENST00000280083ENST00000341502ENST00000341749ENST00000348007ENST00000396158ENST00000396165ENST00000553352ENST00000553383ENST00000554392ENST00000555716ENST00000556148ENST00000556593ENST00000556990ENST00000557038ENSG00000165355ENST00000298097ENST00000554190ENST00000554932ENSG00000258941ENST00000553728ENSG00000271424ENST00000604758CIL_0003W0_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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003W0_0001ENSG00000150527ENST00000280083ENST00000341502ENST00000341749ENST00000348007ENST00000396165ENST00000553352ENST00000553383ENST00000554392ENST00000556148ENSG00000165355ENST00000298097ENSG00000258941ENST00000553728ENSG00000271424ENST00000604758CIL_0003W0_0002ENSMUSG00000021000ENSMUST00000069430ENSMUST00000170992ENSMUST00000175685ENSMUST00000175877ENSMUST00000175912ENSMUST00000176322ENSMUST00000176336ENSMUST00000176464ENSMUST00000176617ENSMUST00000176727ENSMUST00000176892ENSMUST00000177162ENSMUST00000177370ENSMUSG00000035329ENSMUST00000043204ENSMUST00000160204ENSMUST00000161351ENSMUSG00000077505ENSMUST00000104317
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000150527 ENST00000280083 N/A N/A N/A N/A N/A 0.890±0.00 N/A N/A N/A N/A N/A 1.404±0.00 N/A N/A
ENST00000341502 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.424±0.42
ENST00000341749 N/A N/A N/A 1.344±0.39 2.590±0.00 N/A 1.506±0.09 8.357±1.17 N/A 1.181±0.00 0.612±0.00 2.013±0.77 1.280±0.12 2.387±0.03
ENST00000348007 1.351±0.00 1.644±0.00 N/A 1.222±0.00 N/A 1.745±0.25 2.200±0.00 3.710±0.00 1.745±0.91 1.395±0.00 1.180±0.02 3.814±3.14 2.036±1.28 3.797±1.49
ENST00000396158 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000396165 N/A N/A N/A 1.881±0.00 N/A N/A 0.591±0.00 N/A N/A N/A 0.718±0.00 N/A N/A N/A
ENST00000553352 N/A 0.804±0.00 3.707±0.00 N/A 1.710±0.00 N/A N/A N/A N/A N/A N/A 2.955±0.35 N/A N/A
ENST00000553383 N/A N/A N/A N/A N/A N/A N/A N/A 6.237±0.00 N/A 1.999±0.00 3.942±0.00 N/A N/A
ENST00000554392 N/A N/A N/A N/A N/A 13.855±0.00 N/A N/A 11.586±0.00 10.016±0.00 N/A N/A N/A N/A
ENST00000555716 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556148 1.807±0.00 2.640±0.00 N/A 1.621±0.00 1.486±0.00 1.300±0.00 2.544±0.00 6.213±0.00 9.209±0.00 3.863±0.00 3.072±0.00 4.319±0.00 2.019±0.63 2.343±0.00
ENST00000556593 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556990 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557038 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000165355 ENST00000298097 0.390±0.00 N/A N/A 5.639±0.00 N/A 0.804±0.00 1.078±0.82 3.301±0.00 1.790±0.52 2.018±0.40 0.402±0.07 1.804±0.45 0.912±0.39 4.753±0.37
ENST00000554190 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554932 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000258941 ENST00000553728 N/A N/A 3.927±0.00 N/A N/A 1.076±0.00 N/A 3.529±1.45 N/A 0.930±0.00 N/A 0.919±0.00 N/A N/A
ENSG00000271424 ENST00000604758 N/A 0.398±0.00 0.811±0.00 0.124±0.03 0.664±0.38 1.357±0.00 0.150±0.07 0.164±0.12 0.204±0.00 N/A N/A 0.358±0.20 N/A 0.163±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021000 ENSMUST00000069430 N/A N/A 3.628±0.00 N/A N/A N/A N/A 12.318±0.17 11.130±3.42 3.740±0.00 3.329±0.00 16.063±2.21 5.873±1.28 N/A
ENSMUST00000170992 4.423±1.92 25.376±3.30 N/A 5.156±0.47 14.789±0.78 14.834±3.95 N/A 7.283±0.00 9.299±3.79 7.119±2.48 N/A 12.302±2.92 4.841±0.72 3.001±0.70
ENSMUST00000175659 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000175685 N/A N/A N/A 11.948±0.00 16.306±0.00 15.155±0.00 N/A N/A N/A N/A N/A 11.679±0.32 N/A N/A
ENSMUST00000175803 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000175837 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000175877 N/A N/A N/A 4.758±0.00 N/A N/A 3.189±0.00 N/A N/A N/A 6.209±1.67 N/A N/A N/A
ENSMUST00000175912 N/A N/A 4.588±0.40 2.001±0.00 N/A N/A N/A N/A 6.621±2.29 N/A N/A N/A N/A N/A
ENSMUST00000176223 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000176322 4.338±0.45 N/A 8.774±2.10 N/A 6.923±1.96 5.452±0.66 N/A 9.307±0.00 11.978±2.98 8.271±1.95 N/A 4.998±1.54 11.318±2.87 3.934±0.42
ENSMUST00000176336 N/A N/A N/A 3.588±0.00 N/A N/A N/A N/A N/A N/A N/A 14.409±7.24 14.827±8.07 6.892±0.00
ENSMUST00000176464 N/A N/A N/A 1.488±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000176617 8.722±2.71 N/A N/A 3.865±0.00 12.302±4.65 6.327±0.34 4.432±1.46 37.824±3.22 26.233±16.82 N/A 5.459±0.81 10.001±6.42 10.532±0.33 3.133±1.07
ENSMUST00000176727 N/A N/A N/A 22.271±0.00 N/A N/A N/A N/A N/A N/A N/A 125.632±0.00 59.618±6.65 23.438±0.00
ENSMUST00000176752 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000176892 2.628±0.00 9.922±0.00 6.388±0.19 3.523±0.00 N/A N/A N/A N/A N/A 5.706±0.00 N/A 6.225±0.00 N/A N/A
ENSMUST00000177162 N/A N/A N/A N/A N/A N/A 5.407±1.94 N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000177222 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000177225 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000177370 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 15.555±0.00 N/A N/A N/A
ENSMUST00000177460 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000035329 ENSMUST00000043204 2.723±1.19 10.913±4.13 2.700±1.09 2.772±0.72 3.155±1.43 2.883±1.34 0.805±0.22 2.844±0.65 2.223±0.91 2.571±0.68 0.519±0.22 4.540±1.78 2.592±0.64 1.614±0.92
ENSMUST00000160204 N/A N/A N/A 0.537±0.00 0.467±0.03 N/A N/A N/A 1.080±0.00 1.632±0.00 N/A N/A N/A 0.796±0.00
ENSMUST00000161351 3.119±1.00 N/A N/A 6.814±0.00 4.181±1.33 N/A 1.773±0.43 2.369±0.00 N/A 3.895±1.11 0.520±0.00 9.961±2.48 5.241±0.00 3.370±0.12
ENSMUST00000162855 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000077505 ENSMUST00000104317 N/A N/A N/A N/A N/A N/A N/A N/A 23.402±5.84 N/A 7.029±0.81 22.888±0.00 13.593±0.00 N/A

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