C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003XE_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000102904-ENSG00000102901 CGP 9606 16:67806765-67847811
GeneTranscriptPositionBiotype
ENSG00000102898 (NUTF2)
nuclear transport factor 2 		ENST00000219169 (NUTF2-001) 67846732-67872567 protein_coding
ENST00000567105 (NUTF2-002) 67846935-67870852 protein_coding
ENST00000568233 (NUTF2-007) 67846935-67868838 retained_intron
ENST00000568390 (NUTF2-006) 67846923-67868741 retained_intron
ENST00000568396 (NUTF2-004) 67847211-67871323 protein_coding
ENST00000569436 (NUTF2-003) 67847161-67871323 protein_coding
ENST00000570026 (NUTF2-005) 67847342-67868496 retained_intron
ENST00000587481 (NUTF2-012) 67869960-67872567 retained_intron
ENSG00000102901 (CENPT)
centromere protein T 		ENST00000436104 (CENPT-005) 67828159-67833897 retained_intron
ENST00000440851 (CENPT-201) 67828161-67835338 protein_coding
ENST00000561593 (CENPT-011) 67832462-67847693 protein_coding
ENST00000562338 (CENPT-028) 67831794-67833931 nonsense_mediated_decay
ENST00000562462 (CENPT-007) 67830905-67833938 nonsense_mediated_decay
ENST00000562483 (CENPT-024) 67831829-67833896 retained_intron
ENST00000562513 (CENPT-033) 67828159-67833860 nonsense_mediated_decay
ENST00000562787 (CENPT-001) 67828157-67847458 protein_coding
ENST00000562947 (CENPT-026) 67830395-67832312 processed_transcript
ENST00000563885 (CENPT-009) 67828187-67833880 retained_intron
ENST00000564128 (CENPT-003) 67829949-67833946 retained_intron
ENST00000564144 (CENPT-016) 67833974-67843305 processed_transcript
ENST00000564346 (CENPT-020) 67833890-67843108 processed_transcript
ENST00000564538 (CENPT-029) 67831586-67833860 processed_transcript
ENST00000564817 (CENPT-008) 67828209-67833918 protein_coding
ENST00000565114 (CENPT-010) 67832510-67847696 protein_coding
ENST00000565132 (CENPT-014) 67833966-67846823 processed_transcript
ENST00000565157 (CENPT-006) 67828159-67833897 retained_intron
ENST00000565385 (CENPT-018) 67833945-67843129 processed_transcript
ENST00000565436 (CENPT-021) 67835248-67841950 processed_transcript
ENST00000565713 (CENPT-025) 67831216-67833943 nonsense_mediated_decay
ENST00000566067 (CENPT-030) 67831769-67833943 nonsense_mediated_decay
ENST00000566758 (CENPT-027) 67829945-67833885 protein_coding
ENST00000567482 (CENPT-017) 67834025-67843290 processed_transcript
ENST00000567985 (CENPT-019) 67833840-67843142 protein_coding
ENST00000568069 (CENPT-023) 67831220-67833929 nonsense_mediated_decay
ENST00000568495 (CENPT-031) 67828185-67830253 retained_intron
ENST00000568564 (CENPT-022) 67832392-67834212 retained_intron
ENST00000568652 (CENPT-012) 67833956-67847752 processed_transcript
ENST00000568765 (CENPT-032) 67834034-67847811 processed_transcript
ENST00000569019 (CENPT-015) 67834034-67843337 processed_transcript
ENST00000569094 (CENPT-013) 67833889-67847755 processed_transcript
ENST00000569862 (CENPT-002) 67828157-67833913 retained_intron
ENST00000574569 (CENPT-004) 67828186-67829170 retained_intron
ENSG00000168286 (THAP11)
THAP domain containing 11 		ENST00000303596 (THAP11-001) 67842082-67844195 protein_coding

Homo sapiens Ensembl (GRCh38)

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Structures from Ensembl
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CIL_0003XE_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000031893-ENSMUSG00000036672 CGP 10090 8:105827744-105852008
GeneTranscriptPositionBiotype
ENSMUSG00000031893 (Tsnaxip1)
translin-associated factor X (Tsnax) interacting protein 1 		ENSMUST00000034365 (Tsnaxip1-201) 105827744-105844676 protein_coding
ENSMUSG00000036672 (Cenpt)
centromere protein T 		ENSMUST00000040776 (Cenpt-201) 105844678-105852008 protein_coding

Mus musculus Ensembl (GRCm38)

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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003XE_0001ENSG00000102898ENST00000219169ENST00000567105ENST00000568233ENST00000568390ENST00000568396ENST00000569436ENST00000570026ENST00000587481ENSG00000102901ENST00000436104ENST00000440851ENST00000561593ENST00000562338ENST00000562462ENST00000562483ENST00000562513ENST00000562787ENST00000562947ENST00000563885ENST00000564128ENST00000564144ENST00000564346ENST00000564538ENST00000564817ENST00000565114ENST00000565132ENST00000565157ENST00000565385ENST00000565436ENST00000565713ENST00000566067ENST00000566758ENST00000567482ENST00000567985ENST00000568069ENST00000568495ENST00000568564ENST00000568652ENST00000568765ENST00000569019ENST00000569094ENST00000569862ENST00000574569ENSG00000168286ENST00000303596CIL_0003XE_0002ENSMUSG00000031893ENSMUST00000034365ENSMUSG00000036672ENSMUST00000040776
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003XE_0001ENSG00000102898ENST00000219169ENST00000568396ENST00000569436ENSG00000102901ENST00000436104ENST00000563885ENST00000564817ENST00000565157ENST00000568495ENST00000569862ENSG00000168286ENST00000303596CIL_0003XE_0002ENSMUSG00000031893ENSMUST00000034365ENSMUSG00000036672ENSMUST00000040776
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000102898 ENST00000219169 6.286±0.00 N/A N/A 8.700±2.36 5.799±2.85 8.147±0.00 0.945±0.00 N/A 1.269±0.00 4.839±0.71 4.759±2.17 9.129±6.28 10.526±1.44 20.592±0.00
ENST00000567105 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568233 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568390 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568396 N/A N/A N/A N/A N/A N/A N/A 4.469±0.00 N/A N/A N/A N/A N/A N/A
ENST00000569436 29.938±0.00 60.738±0.00 3.731±0.00 19.540±4.89 17.296±10.64 15.221±9.79 2.422±0.00 24.939±20.54 11.593±2.64 N/A 19.460±8.71 35.485±19.24 62.218±21.31 59.713±0.00
ENST00000570026 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587481 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000102901 ENST00000436104 N/A N/A N/A N/A N/A N/A 0.756±0.00 N/A N/A 2.499±0.00 N/A N/A N/A N/A
ENST00000440851 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561593 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000562338 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000562462 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000562483 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000562513 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000562787 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000562947 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563885 N/A N/A N/A N/A N/A N/A N/A 2.384±0.00 N/A N/A N/A 11.429±0.00 N/A N/A
ENST00000564128 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564144 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564346 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564538 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564817 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.063±0.00 N/A N/A N/A N/A
ENST00000565114 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565132 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565157 N/A N/A N/A N/A N/A N/A N/A N/A 1.247±0.00 8.912±0.00 N/A 22.004±0.00 N/A N/A
ENST00000565385 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565436 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565713 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566067 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566758 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567482 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567985 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568069 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568495 N/A N/A N/A N/A N/A 3.435±0.00 N/A N/A N/A N/A N/A 10.826±0.00 10.438±0.00 59.961±0.00
ENST00000568564 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568652 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568765 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569019 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569094 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569862 N/A N/A 0.976±0.00 N/A N/A 1.349±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000574569 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000168286 ENST00000303596 12.675±0.00 40.023±0.00 1.627±0.00 12.112±6.95 10.336±5.93 13.253±9.74 11.326±9.77 13.760±10.93 5.400±2.87 7.987±5.23 11.960±8.45 23.909±15.67 23.533±4.39 34.458±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031893 ENSMUST00000034365 0.101±0.06 0.059±0.02 0.029±0.01 0.484±0.00 0.146±0.06 0.046±0.02 0.077±0.03 0.067±0.04 0.080±0.02 1.078±0.44 0.016±0.00 1.466±1.16 0.070±0.03 109.167±62.46
ENSMUSG00000036672 ENSMUST00000040776 4.525±1.13 2.316±0.57 4.223±1.00 19.014±10.31 2.623±1.13 3.735±0.95 1.005±0.12 1.862±0.32 7.640±7.70 4.203±1.09 0.614±0.17 6.335±2.23 27.015±9.43 4.461±1.89

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