C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003YR_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000170011-ENSG00000114784 CGP 9606 3:39808914-40312424
GeneTranscriptPositionBiotype
ENSG00000114784 (EIF1B)
eukaryotic translation initiation factor 1B 		ENST00000232905 (EIF1B-001) 40309684-40312424 protein_coding
ENST00000462088 (EIF1B-004) 40309722-40311514 retained_intron
ENST00000487151 (EIF1B-002) 40310628-40311672 retained_intron
ENST00000488260 (EIF1B-003) 40309826-40311795 retained_intron
ENSG00000170011 (MYRIP)
myosin VIIA and Rab interacting protein 		ENST00000302541 (MYRIP-001) 39809605-40260321 protein_coding
ENST00000396217 (MYRIP-201) 39809660-40260313 protein_coding
ENST00000425621 (MYRIP-004) 39809706-40258521 protein_coding
ENST00000444716 (MYRIP-002) 39808914-40258166 protein_coding
ENST00000458292 (MYRIP-006) 39809832-40258752 nonsense_mediated_decay
ENST00000458441 (MYRIP-005) 39809832-40258752 nonsense_mediated_decay
ENST00000459828 (MYRIP-007) 40071116-40259965 processed_transcript
ENST00000475082 (MYRIP-003) 39810487-40162962 processed_transcript
ENST00000482033 (MYRIP-008) 40100011-40167224 processed_transcript
ENST00000539167 (MYRIP-202) 40100011-40260313 protein_coding
ENSG00000202517 (SNORA64)
Small nucleolar RNA SNORA64/SNORA10 family 		ENST00000365647 (SNORA64.1-203) 40238608-40238741 snoRNA
ENSG00000265327 (RN7SL411P)
RNA, 7SL, cytoplasmic 411, pseudogene 		ENST00000585204 (RN7SL411P-201) 40209005-40209304 misc_RNA
CIL_0003YR_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000041794-ENSMUSG00000006941 CGP 10090 9:120303936-120495327
GeneTranscriptPositionBiotype
ENSMUSG00000006941 (Eif1b)
eukaryotic translation initiation factor 1B 		ENSMUST00000007139 (Eif1b-201) 120492606-120495327 protein_coding
ENSMUSG00000041794 (Myrip)
myosin VIIA and Rab interacting protein 		ENSMUST00000048121 (Myrip-001) 120303936-120474841 protein_coding
ENSMUST00000129168 (Myrip-004) 120427406-120432483 processed_transcript
ENSMUST00000133173 (Myrip-002) 120386309-120424657 protein_coding
ENSMUST00000139665 (Myrip-003) 120409883-120417204 processed_transcript
ENSMUSG00000082356 (Gm15565)
predicted gene 15565 		ENSMUST00000118890 (Gm15565-001) 120384911-120385337 processed_pseudogene
ENSMUSG00000083772 (Gm15566)
predicted gene 15566 		ENSMUST00000121130 (Gm15566-001) 120316328-120316917 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003YR_0001ENSG00000114784ENST00000232905ENST00000462088ENST00000487151ENST00000488260ENSG00000170011ENST00000302541ENST00000396217ENST00000425621ENST00000444716ENST00000458292ENST00000458441ENST00000459828ENST00000475082ENST00000482033ENST00000539167ENSG00000202517ENST00000365647ENSG00000265327ENST00000585204CIL_0003YR_0002ENSMUSG00000006941ENSMUST00000007139ENSMUSG00000041794ENSMUST00000048121ENSMUST00000129168ENSMUST00000133173ENSMUST00000139665ENSMUSG00000082356ENSMUST00000118890ENSMUSG00000083772ENSMUST00000121130
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003YR_0001ENSG00000114784ENST00000232905ENST00000487151ENST00000488260ENSG00000170011ENST00000302541ENST00000396217ENST00000425621ENST00000444716ENST00000458292ENST00000458441ENST00000459828ENST00000539167ENSG00000202517ENST00000365647ENSG00000265327ENST00000585204CIL_0003YR_0002ENSMUSG00000006941ENSMUST00000007139ENSMUSG00000041794ENSMUST00000048121ENSMUST00000129168ENSMUST00000133173ENSMUSG00000082356ENSMUST00000118890ENSMUSG00000083772ENSMUST00000121130
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000114784 ENST00000232905 23.881±0.00 24.230±0.00 3.864±0.00 35.333±19.32 13.006±6.23 22.428±17.29 78.140±67.89 18.431±13.14 8.771±3.92 33.443±24.69 22.251±13.84 32.993±26.56 24.639±3.64 44.164±8.48
ENST00000462088 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487151 N/A N/A 1.048±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488260 N/A N/A N/A N/A 2.115±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000170011 ENST00000302541 0.507±0.00 0.626±0.00 N/A 1.160±0.21 N/A 0.771±0.00 N/A 1.328±0.00 1.441±0.00 N/A N/A 0.349±0.07 N/A N/A
ENST00000396217 N/A 0.881±0.00 N/A 3.680±0.00 1.079±0.00 N/A 0.290±0.23 N/A N/A N/A N/A 0.160±0.00 N/A 0.671±0.53
ENST00000425621 N/A N/A N/A N/A 0.500±0.00 N/A N/A N/A 0.182±0.00 N/A 0.362±0.00 N/A 0.028±0.00 N/A
ENST00000444716 0.642±0.00 N/A N/A 1.644±0.00 1.674±0.00 N/A N/A N/A N/A 0.117±0.00 N/A 0.096±0.00 0.087±0.01 N/A
ENST00000458292 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.079±0.00 N/A N/A
ENST00000458441 N/A N/A N/A N/A N/A N/A N/A N/A 0.213±0.00 N/A N/A N/A N/A 0.455±0.00
ENST00000459828 0.345±0.00 0.603±0.00 N/A 4.430±0.00 0.286±0.00 0.416±0.00 0.156±0.02 N/A 0.457±0.00 0.090±0.00 0.182±0.00 0.186±0.09 0.057±0.03 0.618±0.49
ENST00000475082 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482033 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000539167 N/A N/A N/A 1.697±0.38 N/A N/A N/A N/A N/A 0.106±0.00 N/A N/A N/A N/A
ENSG00000202517 ENST00000365647 N/A N/A N/A N/A N/A N/A 0.349±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000265327 ENST00000585204 0.248±0.00 0.130±0.00 0.302±0.00 N/A N/A N/A 0.123±0.00 0.067±0.00 0.314±0.00 N/A N/A 0.227±0.00 N/A 0.060±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000006941 ENSMUST00000007139 23.355±2.87 89.663±19.23 35.561±4.21 78.500±14.73 29.747±14.69 23.040±5.04 20.207±4.15 25.029±0.47 20.698±9.39 27.133±7.61 25.279±1.53 41.473±3.37 43.537±12.11 59.464±14.54
ENSMUSG00000041794 ENSMUST00000048121 1.573±0.52 0.990±0.14 1.281±0.34 3.287±2.20 0.748±0.22 2.582±0.40 0.625±0.17 0.290±0.17 0.032±0.02 3.840±1.70 0.243±0.05 1.671±0.79 0.158±0.08 0.093±0.08
ENSMUST00000129168 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.253±0.00 N/A N/A
ENSMUST00000133173 N/A N/A N/A N/A N/A N/A N/A N/A 0.021±0.00 N/A 0.241±0.00 1.326±0.00 N/A 0.163±0.00
ENSMUST00000139665 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000082356 ENSMUST00000118890 N/A N/A N/A 0.105±0.04 N/A N/A N/A N/A N/A N/A N/A 0.499±0.24 N/A N/A
ENSMUSG00000083772 ENSMUST00000121130 0.348±0.00 N/A 0.019±0.00 0.043±0.03 N/A N/A 0.081±0.00 N/A N/A 0.134±0.00 N/A 0.068±0.00 0.170±0.00 N/A

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