C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0003ZM_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000106069-ENSG00000176532 CGP 9606 7:29122274-29567295
GeneTranscriptPositionBiotype
ENSG00000106066 (CPVL)
carboxypeptidase, vitellogenic-like
ENST00000265394 (CPVL-001) 28995231-29146537 protein_coding
ENST00000396276 (CPVL-002) 28995631-29146497 protein_coding
ENST00000409850 (CPVL-009) 28995637-29195276 protein_coding
ENST00000432534 (CPVL-007) 28995634-29071845 protein_coding
ENST00000437527 (CPVL-011) 29121042-29195447 protein_coding
ENST00000447426 (CPVL-003) 29072398-29113768 protein_coding
ENST00000448959 (CPVL-004) 29066042-29112921 protein_coding
ENST00000449801 (CPVL-012) 29120905-29195186 protein_coding
ENST00000455544 (CPVL-010) 29120931-29195451 protein_coding
ENST00000455893 (CPVL-006) 28995637-29071904 protein_coding
ENST00000458405 (CPVL-005) 29072383-29096455 protein_coding
ENST00000488891 (CPVL-008) 29096103-29195236 processed_transcript
ENST00000612187 (CPVL-201) 29064149-29146465 protein_coding
ENST00000614864 (CPVL-202) 28995637-29121066 protein_coding
ENSG00000106069 (CHN2)
chimerin 2
ENST00000222792 (CHN2-001) 29194412-29514328 protein_coding
ENST00000409041 (CHN2-201) 29480111-29514327 protein_coding
ENST00000409350 (CHN2-009) 29194925-29400735 protein_coding
ENST00000409922 (CHN2-008) 29288881-29400781 processed_transcript
ENST00000409964 (CHN2-013) 29197925-29400600 processed_transcript
ENST00000410098 (CHN2-004) 29483816-29512740 processed_transcript
ENST00000412536 (CHN2-015) 29334505-29400696 processed_transcript
ENST00000412711 (CHN2-002) 29479712-29514328 retained_intron
ENST00000421775 (CHN2-202) 29480111-29512735 protein_coding
ENST00000423511 (CHN2-020) 29128021-29146695 protein_coding
ENST00000424025 (CHN2-203) 29480111-29514327 protein_coding
ENST00000433720 (CHN2-005) 29504795-29509681 protein_coding
ENST00000435288 (CHN2-204) 29194505-29514327 protein_coding
ENST00000439384 (CHN2-010) 29146569-29400590 protein_coding
ENST00000439711 (CHN2-205) 29480111-29512735 protein_coding
ENST00000443025 (CHN2-022) 29125033-29128172 processed_transcript
ENST00000446446 (CHN2-018) 29400700-29507303 protein_coding
ENST00000461824 (CHN2-012) 29146589-29148657 processed_transcript
ENST00000467441 (CHN2-007) 29479946-29507301 processed_transcript
ENST00000470261 (CHN2-011) 29146632-29147304 retained_intron
ENST00000474070 (CHN2-017) 29146597-29480356 nonsense_mediated_decay
ENST00000478128 (CHN2-016) 29334508-29400617 processed_transcript
ENST00000482820 (CHN2-014) 29334518-29398485 processed_transcript
ENST00000483081 (CHN2-019) 29335707-29367971 processed_transcript
ENST00000491856 (CHN2-003) 29396648-29401281 retained_intron
ENST00000493906 (CHN2-006) 29480011-29504820 processed_transcript
ENST00000495789 (CHN2-206) 29194942-29512735 protein_coding
ENST00000539389 (CHN2-207) 29194942-29512735 protein_coding
ENST00000539406 (CHN2-208) 29194942-29512735 protein_coding
ENST00000578605 (CHN2-021) 29122453-29146223 processed_transcript
ENST00000582692 (CHN2-023) 29122274-29126579 processed_transcript
ENST00000588769 (CHN2-024) 29125055-29128167 processed_transcript
ENST00000606897 (CHN2-025) 29124982-29128150 processed_transcript
ENSG00000176532 (PRR15)
proline rich 15
ENST00000319694 (PRR15-001) 29563811-29567295 protein_coding
ENST00000450427 (PRR15-002) 29565450-29566383 protein_coding
ENSG00000235669 (AC004593.3)
ENST00000446246 (AC004593.3-001) 29199540-29208970 antisense
ENSG00000237065 (NANOGP4)
Nanog homeobox pseudogene 4
ENST00000427230 (NANOGP4-001) 29212302-29213214 transcribed_processed_pseudogene
ENSG00000270196 (RP11-550A18.1)
ENST00000604053 (RP11-550A18.1-001) 29551521-29552151 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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Transcripts
Structures from Ensembl
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CIL_0003ZM_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000004633-ENSMUSG00000045725 CGP 10090 6:54039554-54330200
GeneTranscriptPositionBiotype
ENSMUSG00000004633 (Chn2)
chimerin 2
ENSMUST00000046856 (Chn2-001) 54039573-54300721 protein_coding
ENSMUST00000067741 (Chn2-003) 54272490-54301810 protein_coding
ENSMUST00000114401 (Chn2-005) 54269156-54300391 protein_coding
ENSMUST00000114402 (Chn2-006) 54267131-54300085 protein_coding
ENSMUST00000114403 (Chn2-002) 54040039-54222550 protein_coding
ENSMUST00000127323 (Chn2-007) 54040086-54195872 protein_coding
ENSMUST00000133315 (Chn2-009) 54039613-54220570 processed_transcript
ENSMUST00000138930 (Chn2-008) 54039554-54067798 processed_transcript
ENSMUST00000146114 (Chn2-004) 54264858-54300293 protein_coding
ENSMUSG00000045725 (Prr15)
proline rich 15
ENSMUST00000059138 (Prr15-201) 54327012-54330200 protein_coding
ENSMUSG00000080205 (Gm15526)
predicted gene 15526
ENSMUST00000112504 (Gm15526-001) 54177480-54177683 processed_pseudogene
ENSMUSG00000087670 (9530036M11Rik)
RIKEN cDNA 9530036M11 gene
ENSMUST00000138767 (9530036M11Rik-001) 54146887-54150937 antisense

Mus musculus Ensembl (GRCm38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003ZM_0001ENSG00000106066ENST00000265394ENST00000396276ENST00000432534ENST00000455893ENST00000612187ENST00000614864ENSG00000106069ENST00000222792ENST00000409041ENST00000412711ENST00000470261ENSG00000176532ENST00000319694ENST00000450427ENSG00000235669ENST00000446246ENSG00000237065ENST00000427230ENSG00000270196ENST00000604053CIL_0003ZM_0002ENSMUSG00000004633ENSMUST00000046856ENSMUST00000067741ENSMUST00000114401ENSMUST00000114402ENSMUST00000133315ENSMUST00000146114ENSMUSG00000045725ENSMUST00000059138ENSMUSG00000080205ENSMUST00000112504ENSMUSG00000087670ENSMUST00000138767
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000106066 ENST00000265394 N/A N/A 3.157±0.00 N/A 1.709±0.00 N/A N/A N/A 2.656±0.00 N/A N/A 5.523±0.00 N/A N/A
ENST00000396276 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.401±0.00
ENST00000409850 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000432534 6.123±0.00 15.816±0.00 N/A N/A 9.379±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 17.215±0.00
ENST00000437527 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000447426 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000448959 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000449801 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000455544 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000455893 N/A N/A 14.632±0.00 N/A 7.540±0.00 12.419±0.00 11.698±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000458405 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488891 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000612187 4.545±0.00 8.606±0.00 N/A N/A 10.668±0.00 N/A 11.858±0.00 N/A N/A 4.947±0.00 2.871±0.00 12.230±0.00 N/A 13.852±2.54
ENST00000614864 8.163±0.00 5.441±0.00 7.476±0.00 N/A 7.287±0.00 6.647±2.14 13.207±5.88 18.729±12.32 9.002±0.00 15.434±6.58 2.308±0.00 16.163±2.43 46.753±13.75 7.368±0.00
ENSG00000106069 ENST00000222792 N/A N/A N/A 2.988±0.00 0.969±0.12 N/A N/A 3.491±0.00 8.137±0.00 N/A N/A N/A 9.152±0.00 N/A
ENST00000409041 N/A N/A N/A 4.422±1.02 N/A 2.872±0.04 N/A N/A 3.382±0.00 N/A N/A N/A N/A N/A
ENST00000409350 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000409922 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000409964 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000410098 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000412536 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000412711 N/A N/A N/A 2.262±0.00 N/A N/A N/A N/A N/A N/A N/A 9.323±0.00 N/A N/A
ENST00000421775 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000423511 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000424025 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000433720 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000435288 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000439384 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000439711 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000443025 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000446446 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000461824 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467441 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470261 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.793±0.00 N/A N/A N/A
ENST00000474070 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478128 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482820 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483081 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491856 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493906 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495789 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000539389 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000539406 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000578605 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582692 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588769 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000606897 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000176532 ENST00000319694 0.694±0.00 0.096±0.00 0.568±0.00 0.160±0.11 0.389±0.16 6.554±1.77 0.054±0.00 9.123±0.00 0.261±0.24 2.486±0.00 N/A 7.288±2.39 15.938±3.27 1.659±1.49
ENST00000450427 N/A 0.258±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.729±0.00 N/A N/A
ENSG00000235669 ENST00000446246 N/A N/A 0.081±0.00 0.151±0.13 N/A 0.860±0.00 0.122±0.01 N/A 0.594±0.36 0.901±0.00 N/A 0.217±0.16 N/A 0.279±0.00
ENSG00000237065 ENST00000427230 N/A N/A 1.268±0.00 N/A 1.805±0.00 0.531±0.41 0.230±0.16 1.207±0.00 0.369±0.26 0.894±0.00 0.891±0.00 0.213±0.22 0.080±0.01 0.072±0.00
ENSG00000270196 ENST00000604053 N/A N/A N/A N/A N/A 0.190±0.12 N/A N/A N/A N/A N/A 0.064±0.02 N/A 0.019±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000004633 ENSMUST00000046856 2.161±0.77 N/A 3.768±0.04 12.802±3.74 0.989±0.08 3.580±0.92 N/A 5.082±0.73 2.700±1.16 2.158±0.20 N/A 3.596±1.01 2.601±1.32 N/A
ENSMUST00000067741 N/A N/A 2.157±0.06 3.878±0.49 N/A N/A N/A 2.853±0.30 N/A N/A N/A 2.085±0.35 N/A N/A
ENSMUST00000114401 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 48.241±2.18
ENSMUST00000114402 2.512±0.00 N/A N/A N/A 2.915±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 214.023±14.18
ENSMUST00000114403 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000127323 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000133315 7.369±0.00 11.101±6.57 N/A N/A 2.261±0.13 6.182±1.75 N/A 8.482±0.49 9.535±0.75 4.876±0.61 N/A 6.793±1.61 N/A N/A
ENSMUST00000138930 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146114 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 89.082±14.23
ENSMUSG00000045725 ENSMUST00000059138 N/A 2.682±1.00 N/A N/A N/A 13.301±1.89 N/A 6.257±0.61 0.710±0.00 3.340±0.00 N/A 9.628±2.33 1.552±0.26 N/A
ENSMUSG00000080205 ENSMUST00000112504 N/A N/A 0.791±0.00 N/A N/A N/A N/A 1.517±0.00 0.319±0.00 N/A 0.930±0.16 1.090±0.00 0.182±0.00 N/A
ENSMUSG00000087670 ENSMUST00000138767 0.070±0.05 0.070±0.00 1.889±0.05 0.064±0.04 0.103±0.05 0.108±0.04 0.051±0.00 0.049±0.02 0.046±0.01 0.038±0.01 0.016±0.00 0.062±0.04 0.032±0.00 0.028±0.01

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