C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00041F_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000101292-ENSG00000125772 CGP 9606 20:5302040-5611026
GeneTranscriptPositionBiotype
ENSG00000101292 (PROKR2)
prokineticin receptor 2 		ENST00000217270 (PROKR2-001) 5302040-5314369 protein_coding
ENSG00000125772 (GPCPD1)
glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae) 		ENST00000379019 (GPCPD1-001) 5544439-5611026 protein_coding
ENST00000418646 (GPCPD1-004) 5544439-5575508 protein_coding
ENST00000462080 (GPCPD1-006) 5547341-5548381 processed_transcript
ENST00000473797 (GPCPD1-005) 5567521-5574123 processed_transcript
ENST00000481038 (GPCPD1-002) 5544439-5586037 processed_transcript
ENST00000481690 (GPCPD1-003) 5575900-5610924 processed_transcript
ENSG00000205181 (LINC00654)
long intergenic non-protein coding RNA 654 		ENST00000379053 (LINC00654-001) 5496067-5504613 lincRNA
ENST00000589201 (LINC00654-003) 5501696-5504527 lincRNA
ENSG00000225640 (RP5-1022P6.4)
 ENST00000450640 (RP5-1022P6.4-001) 5507875-5510002 lincRNA
ENSG00000225831 (RPS18P1)
ribosomal protein S18 pseudogene 1 		ENST00000447840 (RPS18P1-001) 5532878-5533335 processed_pseudogene
ENSG00000226995 (LINC00658)
long intergenic non-protein coding RNA 658 		ENST00000414677 (LINC00658-001) 5431992-5432603 lincRNA
ENST00000420529 (LINC00658-003) 5431992-5445686 lincRNA
ENST00000422352 (LINC00658-002) 5433873-5445746 lincRNA
ENST00000593667 (LINC00658-004) 5431950-5432489 lincRNA
ENST00000599273 (LINC00658-005) 5426895-5432489 lincRNA
ENST00000600157 (LINC00658-006) 5434271-5471094 lincRNA
ENST00000609252 (LINC00658-007) 5434285-5445740 lincRNA
ENSG00000230563 (RP5-828H9.1)
 ENST00000430097 (RP5-828H9.1-001) 5471207-5475182 lincRNA
ENST00000456714 (RP5-828H9.1-002) 5472707-5473975 lincRNA
ENSG00000233578 (RP5-1022P6.3)
 ENST00000422311 (RP5-1022P6.3-001) 5548840-5549481 processed_pseudogene
ENSG00000235820 (RP5-1022P6.5)
 ENST00000413249 (RP5-1022P6.5-001) 5533628-5535889 antisense
ENSG00000276688 (RP5-828H9.4)
 ENST00000611223 (RP5-828H9.4-001) 5407564-5407876 lincRNA
CIL_00041F_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000050558-ENSMUSG00000027346 CGP 10090 2:132337733-132587729
GeneTranscriptPositionBiotype
ENSMUSG00000027345 (4921508D12Rik)
RIKEN cDNA 4921508D12 gene 		ENSMUST00000124095 (4921508D12Rik-001) 132424741-132452499 lincRNA
ENSMUSG00000027346 (Gpcpd1)
glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae) 		ENSMUST00000028822 (Gpcpd1-006) 132532726-132578133 protein_coding
ENSMUST00000060955 (Gpcpd1-001) 132529082-132578233 protein_coding
ENSMUST00000110135 (Gpcpd1-011) 132553957-132587729 protein_coding
ENSMUST00000110136 (Gpcpd1-004) 132529082-132578187 protein_coding
ENSMUST00000110142 (Gpcpd1-201) 132529083-132578248 protein_coding
ENSMUST00000124107 (Gpcpd1-010) 132550462-132578187 protein_coding
ENSMUST00000124632 (Gpcpd1-012) 132534152-132538127 nonsense_mediated_decay
ENSMUST00000127712 (Gpcpd1-007) 132529082-132542031 retained_intron
ENSMUST00000131617 (Gpcpd1-008) 132564627-132578246 processed_transcript
ENSMUST00000140867 (Gpcpd1-009) 132554069-132578217 processed_transcript
ENSMUST00000145694 (Gpcpd1-002) 132529082-132578248 nonsense_mediated_decay
ENSMUST00000148833 (Gpcpd1-005) 132529082-132578178 nonsense_mediated_decay
ENSMUST00000149854 (Gpcpd1-003) 132529082-132578235 nonsense_mediated_decay
ENSMUSG00000050558 (Prokr2)
prokineticin receptor 2 		ENSMUST00000049997 (Prokr2-001) 132370329-132385400 protein_coding
ENSMUST00000110156 (Prokr2-002) 132371165-132385447 protein_coding
ENSMUST00000110157 (Prokr2-005) 132337733-132385427 protein_coding
ENSMUST00000142766 (Prokr2-003) 132370329-132385425 protein_coding
ENSMUST00000145995 (Prokr2-004) 132381568-132385421 protein_coding
ENSMUSG00000086250 (Gm14095)
predicted gene 14095 		ENSMUST00000134264 (Gm14095-001) 132483212-132501148 lincRNA
ENSMUSG00000086379 (1700026D11Rik)
RIKEN cDNA 1700026D11 gene 		ENSMUST00000126910 (1700026D11Rik-003) 132490716-132513902 antisense
ENSMUST00000130884 (1700026D11Rik-001) 132490716-132512340 antisense
ENSMUST00000144501 (1700026D11Rik-005) 132490744-132523858 antisense
ENSMUST00000146398 (1700026D11Rik-006) 132490744-132512300 antisense
ENSMUST00000151417 (1700026D11Rik-002) 132490634-132512299 antisense
ENSMUST00000154067 (1700026D11Rik-004) 132490728-132524057 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00041F_0001ENSG00000101292ENST00000217270ENSG00000125772ENST00000379019ENST00000418646ENST00000481038ENST00000481690ENSG00000205181ENST00000379053ENSG00000225640ENST00000450640ENSG00000225831ENST00000447840ENSG00000226995ENST00000414677ENST00000420529ENST00000422352ENST00000593667ENST00000609252ENSG00000230563ENST00000430097ENST00000456714ENSG00000233578ENST00000422311ENSG00000235820ENST00000413249ENSG00000276688ENST00000611223CIL_00041F_0002ENSMUSG00000027345ENSMUST00000124095ENSMUSG00000027346ENSMUST00000028822ENSMUST00000060955ENSMUST00000110136ENSMUST00000110142ENSMUST00000127712ENSMUST00000145694ENSMUST00000148833ENSMUST00000149854ENSMUSG00000050558ENSMUST00000049997ENSMUST00000110156ENSMUST00000110157ENSMUST00000142766ENSMUSG00000086250ENSMUST00000134264ENSMUSG00000086379ENSMUST00000126910ENSMUST00000130884ENSMUST00000151417ENSMUST00000154067
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000101292 ENST00000217270 N/A N/A N/A 0.280±0.20 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000125772 ENST00000379019 2.256±0.00 3.367±0.00 N/A 4.195±1.46 7.636±6.94 2.715±1.41 2.240±0.75 2.302±0.16 1.755±1.41 8.729±6.75 3.050±0.54 6.662±2.37 3.725±0.31 4.913±1.36
ENST00000418646 N/A N/A N/A N/A N/A N/A N/A N/A 0.194±0.00 1.138±0.00 N/A 2.582±0.00 N/A N/A
ENST00000462080 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000473797 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000481038 0.503±0.00 1.544±0.00 N/A N/A 0.894±0.00 3.123±0.00 0.499±0.25 1.018±0.49 2.550±0.00 0.629±0.00 N/A 5.608±3.02 N/A N/A
ENST00000481690 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.812±0.00 14.539±0.00
ENSG00000205181 ENST00000379053 0.471±0.00 N/A 0.056±0.00 0.225±0.11 0.281±0.00 N/A 0.238±0.00 0.191±0.00 0.367±0.29 0.069±0.00 0.039±0.00 0.407±0.21 0.356±0.00 4.421±1.71
ENST00000589201 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000225640 ENST00000450640 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.367±0.00
ENSG00000225831 ENST00000447840 N/A 0.327±0.00 N/A 0.156±0.00 0.113±0.00 N/A N/A N/A N/A N/A 0.158±0.00 0.105±0.00 0.051±0.00 0.463±0.33
ENSG00000226995 ENST00000414677 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 10.575±0.00
ENST00000420529 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.325±1.63
ENST00000422352 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.058±0.00 N/A 7.145±3.57
ENST00000593667 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.107±0.00 N/A N/A
ENST00000599273 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000600157 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000609252 0.045±0.00 0.288±0.00 N/A 0.052±0.00 0.198±0.00 0.205±0.00 0.021±0.00 0.024±0.00 N/A N/A N/A N/A N/A 12.392±0.00
ENSG00000230563 ENST00000430097 N/A 0.012±0.00 N/A 0.071±0.06 N/A 0.018±0.00 0.020±0.01 N/A N/A N/A N/A 0.038±0.02 N/A N/A
ENST00000456714 N/A 0.031±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000233578 ENST00000422311 N/A 0.447±0.00 N/A 0.054±0.00 1.414±0.64 N/A 0.081±0.03 N/A N/A 2.671±0.00 N/A 0.606±0.37 0.070±0.00 0.095±0.00
ENSG00000235820 ENST00000413249 N/A 0.207±0.00 N/A 0.032±0.00 N/A 0.269±0.00 0.144±0.00 0.029±0.00 N/A N/A N/A N/A N/A 0.166±0.00
ENSG00000276688 ENST00000611223 N/A N/A N/A N/A N/A N/A 0.109±0.00 N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027345 ENSMUST00000124095 N/A N/A N/A 0.019±0.00 N/A N/A N/A 0.037±0.00 N/A N/A 0.032±0.00 N/A 0.024±0.02 0.235±0.18
ENSMUSG00000027346 ENSMUST00000028822 1.981±0.43 0.897±0.70 N/A 3.699±0.00 N/A 0.836±0.13 N/A 0.686±0.06 5.249±2.01 2.323±0.27 N/A 2.772±1.32 5.371±2.25 2.655±1.24
ENSMUST00000060955 6.393±1.03 1.681±0.00 7.181±0.46 7.430±0.86 6.378±3.02 3.037±1.50 16.729±6.33 1.847±0.80 8.210±4.44 4.470±2.49 33.053±10.11 3.328±1.34 6.280±1.79 3.456±1.82
ENSMUST00000110135 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000110136 N/A 0.847±0.00 N/A N/A N/A 0.759±0.00 N/A N/A 3.216±0.69 N/A N/A 2.474±0.00 3.322±0.00 N/A
ENSMUST00000110142 2.282±0.00 0.768±0.00 2.410±0.48 3.686±0.67 N/A N/A 6.775±0.92 2.017±0.57 4.040±2.29 1.828±0.00 N/A 1.230±0.00 4.061±1.27 1.852±0.09
ENSMUST00000124107 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000124632 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000127712 N/A 0.517±0.00 N/A 2.228±0.00 N/A N/A N/A N/A N/A 2.064±0.00 N/A 1.073±0.00 N/A 0.339±0.00
ENSMUST00000131617 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140867 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145694 N/A N/A N/A N/A N/A N/A N/A 1.037±0.00 N/A N/A N/A 1.960±0.00 N/A N/A
ENSMUST00000148833 4.923±0.00 2.674±1.12 N/A N/A 4.699±0.48 4.177±0.00 9.650±1.71 3.120±0.79 4.223±0.00 2.656±0.00 N/A 3.964±1.76 3.308±1.17 N/A
ENSMUST00000149854 N/A 4.727±0.00 2.051±0.00 5.488±0.81 2.979±1.80 1.335±0.33 N/A 0.559±0.00 6.375±2.27 4.561±2.14 N/A 3.760±1.23 4.960±0.00 2.042±0.53
ENSMUSG00000050558 ENSMUST00000049997 N/A N/A 0.005±0.00 0.582±0.50 N/A N/A 0.039±0.00 N/A 0.041±0.02 N/A N/A 0.052±0.02 0.010±0.00 N/A
ENSMUST00000110156 0.033±0.01 N/A 0.004±0.00 0.055±0.00 N/A N/A 0.042±0.01 N/A 0.013±0.00 N/A N/A 0.115±0.05 0.001±0.00 0.028±0.00
ENSMUST00000110157 N/A N/A N/A N/A 0.007±0.00 N/A N/A 0.013±0.01 0.004±0.00 N/A N/A N/A 0.003±0.00 0.025±0.01
ENSMUST00000142766 N/A N/A N/A 0.233±0.00 N/A 0.042±0.01 N/A N/A 0.036±0.02 N/A 0.016±0.00 0.133±0.10 0.033±0.00 0.013±0.01
ENSMUST00000145995 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000086250 ENSMUST00000134264 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.390±0.14
ENSMUSG00000086379 ENSMUST00000126910 0.025±0.00 N/A N/A N/A 0.042±0.01 N/A N/A N/A 0.008±0.00 N/A N/A N/A 0.003±0.00 6.947±0.38
ENSMUST00000130884 N/A N/A N/A 0.059±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144501 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146398 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151417 N/A N/A N/A N/A N/A N/A N/A 0.047±0.00 N/A N/A N/A N/A N/A N/A
ENSMUST00000154067 N/A N/A N/A N/A N/A N/A N/A N/A 0.050±0.00 N/A N/A N/A N/A 24.380±2.25

Loading