C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00041R_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000090840-ENSDARG00000090840 CGP 7955 4:50314645-50629702
GeneTranscriptPositionBiotype
ENSDARG00000086296 (si:ch211-209p16.1)
si:ch211-209p16.1 		ENSDART00000126457 (si:ch211-209p16.1-201) 50588973-50609218 protein_coding
ENSDART00000150621 (si:ch211-209p16.1-001) 50588973-50609425 protein_coding
ENSDARG00000086668 (si:dkey-7j22.4)
si:dkey-7j22.4 		ENSDART00000156670 (si:dkey-7j22.4-001) 50403512-50409720 protein_coding
ENSDARG00000087836 (BX897720.1)
Uncharacterized protein 		ENSDART00000124601 (BX897720.1-201) 50531767-50537402 protein_coding
ENSDARG00000088640 (ZNF585A (10 of 40))
 ENSDART00000121944 (ZNF585A (10 of 40)-201) 50336373-50337419 protein_coding
ENSDART00000156793 (ZNF585A (10 of 40)-001) 50336690-50347976 protein_coding
ENSDARG00000090192 (si:dkey-16p6.1)
NLR family, pyrin domain containing 6 		ENSDART00000099760 (si:dkey-16p6.1-213) 50469752-50475123 protein_coding
ENSDART00000124397 (si:dkey-16p6.1-214) 50488772-50495565 protein_coding
ENSDART00000145036 (si:dkey-16p6.1-001) 50450258-50495821 protein_coding
ENSDARG00000090840 (ZNF585A (16 of 40))
 ENSDART00000122707 (ZNF585A (16 of 40)-201) 50314645-50629447 protein_coding
ENSDART00000150676 (ZNF585A (16 of 40)-001) 50615905-50629702 protein_coding
ENSDARG00000091808 (BX897726.1)
Uncharacterized protein 		ENSDART00000124506 (BX897726.1-201) 50413221-50423828 protein_coding
ENSDARG00000092994 (si:dkeyp-77c4.4)
si:dkeyp-77c4.4 		ENSDART00000134824 (si:dkeyp-77c4.4-201) 50541601-50547737 protein_coding
ENSDART00000156083 (si:dkeyp-77c4.4-001) 50541601-50547865 protein_coding
ENSDARG00000096046 (si:ch211-209p16.4)
si:ch211-209p16.4 		ENSDART00000150580 (si:ch211-209p16.4-001) 50595147-50598365 antisense
ENSDARG00000097091 (zgc:173619)
zgc:173619 		ENSDART00000157214 (zgc:173619-001) 50314575-50322782 protein_coding
ENSDARG00000097393 (si:dkeyp-77c4.2)
si:dkeyp-77c4.2 		ENSDART00000154143 (si:dkeyp-77c4.2-001) 50438050-50440182 lincRNA

Danio rerio Ensembl (Zv9)

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CIL_00041R_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000178917-ENSG00000196345 CGP 9606 3:44498970-44583483
GeneTranscriptPositionBiotype
ENSG00000144792 (ZNF660)
zinc finger protein 660 		ENST00000322734 (ZNF660-001) 44584964-44599694 protein_coding
ENST00000416644 (ZNF660-002) 44578223-44594311 protein_coding
ENST00000441021 (ZNF660-006) 44584964-44594295 protein_coding
ENST00000468987 (ZNF660-003) 44584962-44586702 processed_transcript
ENSG00000178917 (ZNF852)
zinc finger protein 852 		ENST00000436261 (ZNF852-001) 44498970-44510636 protein_coding
ENST00000463067 (ZNF852-003) 44499576-44503110 retained_intron
ENST00000489411 (ZNF852-002) 44499523-44510636 processed_transcript
ENST00000616809 (ZNF852-201) 44499182-44510640 protein_coding
ENSG00000196345 (ZKSCAN7)
zinc finger with KRAB and SCAN domains 7 		ENST00000273320 (ZKSCAN7-001) 44555208-44572158 protein_coding
ENST00000341840 (ZKSCAN7-002) 44555203-44583483 protein_coding
ENST00000418719 (ZKSCAN7-005) 44555229-44570128 nonsense_mediated_decay
ENST00000426540 (ZKSCAN7-004) 44555193-44571494 protein_coding
ENST00000431636 (ZKSCAN7-003) 44555193-44583445 protein_coding
ENST00000447279 (ZKSCAN7-006) 44555444-44583306 protein_coding
ENST00000496563 (ZKSCAN7-008) 44557357-44568477 retained_intron
ENSG00000214820 (MPRIPP1)
myosin phosphatase Rho interacting protein pseudogene 1 		ENST00000452433 (MPRIPP1-001) 44579938-44581026 processed_pseudogene
ENSG00000214825 (EI24P3)
etoposide induced 2.4 pseudogene 3 		ENST00000399046 (EI24P3-001) 44524744-44525805 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00041R_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_00041R_0002ENSG00000144792ENST00000322734ENST00000416644ENST00000441021ENST00000468987ENSG00000178917ENST00000436261ENST00000463067ENST00000489411ENST00000616809ENSG00000196345ENST00000273320ENST00000341840ENST00000418719ENST00000426540ENST00000431636ENST00000447279ENST00000496563ENSG00000214820ENST00000452433ENSG00000214825ENST00000399046
Region; Gene Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00041R_0001ENSDARG00000086296ENSDART00000126457ENSDARG00000086668ENSDART00000156670ENSDARG00000087836ENSDART00000124601ENSDARG00000088640ENSDART00000121944ENSDART00000156793ENSDARG00000090192ENSDART00000099760ENSDART00000124397ENSDART00000145036ENSDARG00000090840ENSDART00000122707ENSDART00000150676ENSDARG00000091808ENSDART00000124506ENSDARG00000092994ENSDART00000134824ENSDART00000156083ENSDARG00000096046ENSDART00000150580ENSDARG00000097091ENSDART00000157214ENSDARG00000097393ENSDART00000154143CIL_00041R_0002ENSG00000144792ENST00000322734ENSG00000178917ENST00000436261ENST00000463067ENST00000489411ENST00000616809ENSG00000196345ENST00000273320ENSG00000214820ENST00000452433ENSG00000214825ENST00000399046
Gene Transcript Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000086296 ENSDART00000126457 N/A N/A 0.177±0.06 N/A N/A 0.181±0.16 0.040±0.01 N/A N/A N/A N/A N/A N/A
ENSDART00000150621 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000086668 ENSDART00000156670 N/A N/A 0.205±0.18 N/A N/A 0.069±0.00 0.152±0.00 N/A N/A 0.163±0.00 N/A N/A N/A
ENSDARG00000087836 ENSDART00000124601 N/A N/A 0.090±0.00 N/A N/A 0.196±0.08 N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000088640 ENSDART00000121944 N/A N/A 0.597±0.43 N/A N/A N/A 0.156±0.00 0.035±0.00 N/A 0.131±0.00 N/A N/A N/A
ENSDART00000156793 N/A N/A 0.143±0.02 N/A N/A 0.524±0.41 0.150±0.00 N/A N/A N/A N/A N/A N/A
ENSDARG00000090192 ENSDART00000099760 N/A N/A 0.050±0.01 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000124397 N/A N/A 1.964±1.26 N/A N/A 3.571±1.17 5.780±0.00 0.297±0.00 N/A 1.359±0.00 N/A N/A N/A
ENSDART00000145036 N/A N/A 0.206±0.13 N/A N/A 0.508±0.09 0.181±0.00 0.311±0.00 N/A 0.138±0.00 N/A N/A N/A
ENSDARG00000090840 ENSDART00000122707 N/A N/A 0.064±0.01 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000150676 N/A N/A 0.070±0.03 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000091808 ENSDART00000124506 N/A N/A 0.146±0.06 N/A N/A 0.092±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000092994 ENSDART00000134824 N/A N/A 0.238±0.13 N/A N/A 0.053±0.00 N/A N/A N/A 0.145±0.00 N/A N/A N/A
ENSDART00000156083 N/A N/A 0.123±0.05 N/A N/A N/A 0.141±0.00 N/A N/A N/A N/A N/A N/A
ENSDARG00000096046 ENSDART00000150580 N/A N/A 8.242±4.58 N/A N/A 53.285±69.06 0.741±0.46 1.452±0.00 N/A 7.875±0.00 N/A N/A N/A
ENSDARG00000097091 ENSDART00000157214 N/A N/A 0.228±0.13 N/A N/A 0.072±0.00 0.065±0.00 N/A N/A N/A N/A N/A N/A
ENSDARG00000097393 ENSDART00000154143 N/A N/A 0.045±0.00 N/A N/A 0.084±0.00 0.051±0.00 N/A N/A 0.081±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000144792 ENST00000322734 0.455±0.00 0.930±0.00 0.614±0.01 N/A 0.400±0.07 0.362±0.00 0.396±0.00 1.276±0.00 0.773±0.00 0.040±0.00 1.654±0.69 0.170±0.00 1.339±0.00
ENST00000416644 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000441021 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468987 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000178917 ENST00000436261 0.507±0.00 0.542±0.00 N/A 0.296±0.00 N/A 0.089±0.00 N/A N/A 0.357±0.00 0.554±0.00 N/A 0.112±0.06 0.316±0.00
ENST00000463067 N/A N/A 0.015±0.00 0.701±0.00 0.151±0.00 0.038±0.00 0.299±0.00 0.113±0.10 0.620±0.00 0.028±0.00 0.087±0.01 0.036±0.00 0.191±0.00
ENST00000489411 0.644±0.00 0.547±0.00 0.146±0.00 0.401±0.18 0.510±0.00 0.207±0.02 0.547±0.00 0.193±0.04 0.556±0.43 N/A 0.188±0.00 0.309±0.06 0.793±0.00
ENST00000616809 N/A N/A N/A N/A N/A N/A N/A 0.718±0.00 0.730±0.00 N/A 0.215±0.00 0.059±0.00 N/A
ENSG00000196345 ENST00000273320 N/A N/A N/A N/A N/A N/A 0.554±0.26 0.201±0.00 N/A N/A N/A 0.273±0.00 N/A
ENST00000341840 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000418719 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000426540 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000431636 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000447279 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496563 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000214820 ENST00000452433 0.169±0.00 N/A 0.084±0.00 0.239±0.00 0.142±0.00 0.074±0.05 0.409±0.00 0.043±0.00 0.216±0.00 0.103±0.00 0.277±0.12 0.068±0.00 0.460±0.24
ENSG00000214825 ENST00000399046 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.053±0.00

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