C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000423_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000240065-ENSG00000240065 CGP 9606 6:32844136-32859585
GeneTranscriptPositionBiotype
ENSG00000168394 (TAP1)
transporter 1, ATP-binding cassette, sub-family B (MDR/TAP) 		ENST00000354258 (TAP1-001) 32845209-32853978 protein_coding
ENST00000486332 (TAP1-002) 32845209-32850142 retained_intron
ENST00000487296 (TAP1-003) 32845675-32848230 retained_intron
ENSG00000240065 (PSMB9)
proteasome (prosome, macropain) subunit, beta type, 9 		ENST00000374859 (PSMB9-001) 32854161-32859585 protein_coding
ENST00000395330 (PSMB9-005) 32844136-32859585 protein_coding
ENST00000414474 (PSMB9-006) 32844836-32858437 protein_coding
ENST00000464863 (PSMB9-002) 32854148-32858900 retained_intron
ENST00000467593 (PSMB9-004) 32856097-32858722 retained_intron
CIL_000423_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000096727-ENSMUSG00000037321 CGP 10090 17:34181988-34197225
GeneTranscriptPositionBiotype
ENSMUSG00000037321 (Tap1)
transporter 1, ATP-binding cassette, sub-family B (MDR/TAP) 		ENSMUST00000041633 (Tap1-005) 34187802-34197219 protein_coding
ENSMUST00000166287 (Tap1-002) 34187728-34192276 retained_intron
ENSMUST00000166582 (Tap1-006) 34193054-34196587 retained_intron
ENSMUST00000166853 (Tap1-003) 34187734-34197225 retained_intron
ENSMUST00000168351 (Tap1-004) 34189891-34197220 retained_intron
ENSMUST00000170086 (Tap1-001) 34187553-34197225 protein_coding
ENSMUST00000171148 (Tap1-007) 34190752-34193568 protein_coding
ENSMUSG00000096727 (Psmb9)
proteasome (prosome, macropain) subunit, beta type 9 (large multifunctional peptidase 2) 		ENSMUST00000114230 (Psmb9-002) 34182033-34187353 retained_intron
ENSMUST00000171321 (Psmb9-006) 34182036-34183731 protein_coding
ENSMUST00000173831 (Psmb9-003) 34184282-34187219 protein_coding
ENSMUST00000174576 (Psmb9-001) 34181988-34187764 protein_coding
ENSMUST00000178857 (Psmb9-005) 34182030-34183549 retained_intron
ENSMUST00000179593 (Psmb9-004) 34184030-34187338 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000423_0001ENSG00000168394ENST00000354258ENST00000486332ENST00000487296ENSG00000240065ENST00000374859ENST00000395330ENST00000414474ENST00000464863ENST00000467593CIL_000423_0002ENSMUSG00000037321ENSMUST00000041633ENSMUST00000166287ENSMUST00000166582ENSMUST00000166853ENSMUST00000168351ENSMUST00000170086ENSMUST00000171148ENSMUSG00000096727ENSMUST00000114230ENSMUST00000171321ENSMUST00000173831ENSMUST00000174576ENSMUST00000178857ENSMUST00000179593
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000423_0001ENSG00000168394ENST00000354258ENST00000487296ENSG00000240065ENST00000374859CIL_000423_0002ENSMUSG00000037321ENSMUST00000041633ENSMUST00000166582ENSMUST00000166853ENSMUST00000168351ENSMUST00000170086ENSMUST00000171148ENSMUSG00000096727ENSMUST00000114230ENSMUST00000174576
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000168394 ENST00000354258 24.320±0.00 35.274±0.00 1.219±0.00 5.905±3.74 15.058±2.79 14.275±1.16 7.204±5.15 11.303±7.75 6.928±2.12 109.679±0.00 11.342±0.00 27.699±20.07 27.160±4.56 10.554±5.94
ENST00000486332 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487296 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.175±0.00 N/A N/A N/A
ENSG00000240065 ENST00000374859 37.679±0.00 65.307±0.00 N/A 11.185±0.00 31.657±0.00 21.258±0.00 11.753±0.00 18.264±7.72 N/A 111.691±0.00 N/A 47.210±0.48 39.774±0.00 28.340±0.00
ENST00000395330 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000414474 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464863 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467593 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000037321 ENSMUST00000041633 N/A N/A N/A 0.284±0.00 N/A N/A N/A N/A N/A N/A 0.492±0.20 N/A 1.550±0.03 0.100±0.05
ENSMUST00000166287 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000166582 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.725±0.00
ENSMUST00000166853 N/A N/A N/A N/A 8.122±3.20 N/A 1.215±0.00 N/A N/A N/A 0.185±0.00 1.963±0.00 N/A N/A
ENSMUST00000168351 N/A N/A N/A 0.253±0.00 4.583±0.00 N/A N/A N/A N/A N/A 0.704±0.23 1.885±0.69 N/A 0.128±0.00
ENSMUST00000170086 19.716±0.41 18.012±2.26 11.769±2.13 0.426±0.12 28.649±9.87 11.251±2.74 3.691±0.72 6.375±0.68 5.645±2.77 19.185±1.85 1.098±0.56 9.371±3.05 5.939±4.32 0.231±0.05
ENSMUST00000171148 N/A N/A N/A 1.596±0.00 N/A N/A N/A N/A N/A N/A N/A 13.743±0.00 7.292±2.08 N/A
ENSMUSG00000096727 ENSMUST00000114230 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.344±0.09 N/A N/A 0.011±0.00
ENSMUST00000171321 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000173831 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000174576 34.364±4.60 25.594±4.22 20.457±1.09 0.432±0.17 62.353±22.33 26.023±3.98 7.564±1.63 11.908±2.10 12.989±5.76 44.643±5.68 1.730±0.80 17.869±4.10 2.802±0.82 0.594±0.26
ENSMUST00000178857 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000179593 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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