C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00042P_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000005823-ENSDARG00000060165 CGP 7955 9:25954022-26089067
GeneTranscriptPositionBiotype
ENSDARG00000005823 (slc39a10)
solute carrier family 39 (zinc transporter), member 10 		ENSDART00000037025 (slc39a10-001) 25954022-25984469 protein_coding
ENSDARG00000060165 (dnah7)
dynein, axonemal, heavy chain 7 		ENSDART00000026924 (dnah7-201) 25984728-26089013 protein_coding
ENSDART00000137131 (dnah7-001) 25984474-26089067 protein_coding
ENSDART00000141957 (dnah7-002) 26013874-26018856 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_00042P_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000196950-ENSG00000118997 CGP 9606 2:195575977-196068812
GeneTranscriptPositionBiotype
ENSG00000118997 (DNAH7)
dynein, axonemal, heavy chain 7 		ENST00000312428 (DNAH7-001) 195737703-196068812 protein_coding
ENST00000409063 (DNAH7-008) 195737703-195795879 protein_coding
ENST00000410072 (DNAH7-002) 195998760-196068812 protein_coding
ENST00000427816 (DNAH7-003) 196028008-196068487 protein_coding
ENST00000438565 (DNAH7-006) 195737997-195756198 protein_coding
ENST00000475293 (DNAH7-004) 195892479-195905762 retained_intron
ENST00000484183 (DNAH7-007) 195737757-195741131 processed_transcript
ENST00000493844 (DNAH7-005) 195817698-195834429 retained_intron
ENSG00000196950 (SLC39A10)
solute carrier family 39 (zinc transporter), member 10 		ENST00000359634 (SLC39A10-001) 195657128-195737702 protein_coding
ENST00000409086 (SLC39A10-002) 195656747-195737702 protein_coding
ENST00000412905 (SLC39A10-012) 195657136-195680158 protein_coding
ENST00000418005 (SLC39A10-009) 195657449-195680433 protein_coding
ENST00000430412 (SLC39A10-003) 195657128-195737702 nonsense_mediated_decay
ENST00000444421 (SLC39A10-006) 195656911-195706676 nonsense_mediated_decay
ENST00000458054 (SLC39A10-007) 195575977-195680420 protein_coding
ENST00000464301 (SLC39A10-013) 195657235-195658587 processed_transcript
ENST00000465851 (SLC39A10-011) 195680477-195717383 retained_intron
ENSG00000203435 (E2F3P2)
E2F transcription factor 3 pseudogene 2 		ENST00000447755 (E2F3P2-001) 195994259-195995680 processed_pseudogene
ENSG00000213107 (AHCYP5)
adenosylhomocysteinase pseudogene 5 		ENST00000331585 (AHCYP5-001) 195582794-195584031 processed_pseudogene
ENSG00000227878 (AC114760.1)
 ENST00000420310 (AC114760.1-001) 196063312-196063963 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00042P_0001ENSDARG00000005823ENSDART00000037025ENSDARG00000060165ENSDART00000026924ENSDART00000137131ENSDART00000141957CIL_00042P_0002ENSG00000118997ENST00000312428ENST00000409063ENST00000410072ENST00000427816ENST00000438565ENST00000475293ENST00000484183ENST00000493844ENSG00000196950ENST00000359634ENST00000409086ENST00000412905ENST00000418005ENST00000430412ENST00000444421ENST00000458054ENST00000464301ENST00000465851ENSG00000203435ENST00000447755ENSG00000213107ENST00000331585ENSG00000227878ENST00000420310
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00042P_0001ENSDARG00000005823ENSDART00000037025ENSDARG00000060165ENSDART00000026924ENSDART00000137131CIL_00042P_0002ENSG00000118997ENST00000312428ENST00000409063ENST00000410072ENST00000427816ENST00000438565ENST00000475293ENST00000484183ENST00000493844ENSG00000196950ENST00000359634ENST00000409086ENST00000418005ENST00000430412ENST00000465851ENSG00000203435ENST00000447755ENSG00000213107ENST00000331585ENSG00000227878ENST00000420310
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000005823 ENSDART00000037025 N/A N/A N/A 3.426±0.46 N/A N/A 1.262±0.47 4.575±1.16 0.100±0.00 N/A 0.685±0.00 N/A N/A N/A
ENSDARG00000060165 ENSDART00000026924 N/A N/A N/A 0.097±0.00 N/A N/A 0.059±0.02 N/A 0.014±0.00 N/A 0.054±0.00 N/A N/A N/A
ENSDART00000137131 N/A N/A N/A 0.080±0.01 N/A N/A 0.116±0.02 0.402±0.13 N/A N/A N/A N/A N/A N/A
ENSDART00000141957 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000118997 ENST00000312428 N/A 0.032±0.00 0.648±0.00 0.395±0.24 0.076±0.05 0.023±0.00 0.031±0.00 0.171±0.00 N/A 0.213±0.00 0.008±0.00 0.131±0.12 N/A 1.095±0.44
ENST00000409063 0.046±0.00 0.110±0.00 N/A N/A N/A 0.121±0.00 0.013±0.00 N/A N/A 1.122±0.00 0.029±0.00 0.477±0.45 N/A 3.487±1.01
ENST00000410072 0.028±0.00 N/A N/A N/A N/A N/A 0.033±0.00 N/A N/A N/A N/A 0.050±0.00 N/A N/A
ENST00000427816 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.163±0.00 N/A
ENST00000438565 N/A N/A N/A N/A 0.276±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475293 0.005±0.00 0.022±0.00 N/A N/A 0.006±0.00 0.014±0.00 0.004±0.00 N/A 0.004±0.00 N/A 0.001±0.00 N/A 0.004±0.00 N/A
ENST00000484183 N/A N/A N/A N/A N/A N/A N/A 1.555±0.00 N/A N/A N/A N/A 0.053±0.00 N/A
ENST00000493844 0.055±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.062±0.00 N/A
ENSG00000196950 ENST00000359634 2.363±0.00 2.071±0.00 2.787±0.00 19.069±6.19 2.785±0.14 1.521±0.02 0.995±0.10 1.285±0.60 1.261±1.10 2.837±0.80 0.209±0.00 4.909±4.62 1.115±0.12 1.118±0.00
ENST00000409086 N/A N/A N/A N/A N/A N/A N/A 0.563±0.00 N/A N/A N/A N/A N/A 1.958±0.08
ENST00000412905 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000418005 N/A N/A N/A N/A N/A N/A N/A 1.219±0.00 N/A N/A N/A N/A N/A N/A
ENST00000430412 N/A 1.386±0.00 N/A 3.839±1.95 1.702±0.00 0.498±0.00 N/A 1.081±0.92 N/A 0.524±0.00 0.080±0.00 6.457±5.15 3.006±1.61 1.354±0.00
ENST00000444421 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000458054 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464301 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465851 N/A N/A N/A N/A 2.270±0.00 1.750±0.00 N/A N/A 1.068±0.00 N/A 0.642±0.00 N/A N/A N/A
ENSG00000203435 ENST00000447755 0.029±0.00 0.216±0.00 0.674±0.00 0.147±0.07 0.117±0.00 0.071±0.06 0.056±0.00 0.044±0.02 0.070±0.01 0.208±0.20 N/A 0.065±0.04 0.027±0.01 0.198±0.00
ENSG00000213107 ENST00000331585 N/A N/A N/A N/A N/A 0.329±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000227878 ENST00000420310 N/A N/A N/A 0.110±0.00 N/A 0.294±0.00 N/A N/A N/A N/A N/A 0.028±0.00 N/A 0.122±0.06

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