C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00043I_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000101333-ENSG00000125869 CGP 9606 20:9068763-9530524
GeneTranscriptPositionBiotype
ENSG00000101333 (PLCB4)
phospholipase C, beta 4 		ENST00000278655 (PLCB4-201) 9217390-9480813 protein_coding
ENST00000378473 (PLCB4-202) 9069054-9480813 protein_coding
ENST00000378493 (PLCB4-001) 9307800-9481242 protein_coding
ENST00000378501 (PLCB4-011) 9307800-9481242 protein_coding
ENST00000407043 (PLCB4-008) 9068763-9339007 protein_coding
ENST00000414679 (PLCB4-012) 9307800-9479357 protein_coding
ENST00000416836 (PLCB4-004) 9166358-9338021 protein_coding
ENST00000437503 (PLCB4-007) 9069101-9338912 protein_coding
ENST00000441846 (PLCB4-002) 9068807-9338998 protein_coding
ENST00000464199 (PLCB4-009) 9370934-9481242 processed_transcript
ENST00000473151 (PLCB4-003) 9370962-9481242 processed_transcript
ENST00000482123 (PLCB4-005) 9370962-9481242 processed_transcript
ENST00000492632 (PLCB4-010) 9307800-9481242 processed_transcript
ENSG00000125869 (LAMP5)
lysosomal-associated membrane protein family, member 5 		ENST00000246070 (LAMP5-001) 9514361-9530524 protein_coding
ENST00000427562 (LAMP5-002) 9514358-9529923 protein_coding
ENSG00000225988 (LAMP5-AS1)
LAMP5 antisense RNA 1 		ENST00000443469 (LAMP5-AS1-001) 9505180-9514998 antisense
CIL_00043I_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000039943-ENSMUSG00000027270 CGP 10090 2:135659011-136069917
GeneTranscriptPositionBiotype
ENSMUSG00000027270 (Lamp5)
lysosomal-associated membrane protein family, member 5 		ENSMUST00000057503 (Lamp5-001) 136057927-136069917 protein_coding
ENSMUST00000123436 (Lamp5-003) 136059431-136069905 processed_transcript
ENSMUST00000143777 (Lamp5-002) 136058252-136061494 retained_intron
ENSMUST00000144403 (Lamp5-005) 136052239-136059531 protein_coding
ENSMUST00000154674 (Lamp5-004) 136058252-136059213 processed_transcript
ENSMUSG00000039943 (Plcb4)
phospholipase C, beta 4 		ENSMUST00000035646 (Plcb4-201) 135805548-136013068 protein_coding
ENSMUST00000110109 (Plcb4-002) 135741830-136014593 protein_coding
ENSMUST00000127044 (Plcb4-009) 135887694-135939306 processed_transcript
ENSMUST00000127729 (Plcb4-014) 135764911-135908408 processed_transcript
ENSMUST00000132686 (Plcb4-011) 135946471-135950306 processed_transcript
ENSMUST00000134310 (Plcb4-001) 135659711-135983013 protein_coding
ENSMUST00000137969 (Plcb4-006) 135741830-135910484 retained_intron
ENSMUST00000139480 (Plcb4-005) 135659554-135742838 processed_transcript
ENSMUST00000141025 (Plcb4-010) 135942073-135950353 processed_transcript
ENSMUST00000144931 (Plcb4-004) 135659011-135742751 processed_transcript
ENSMUST00000146018 (Plcb4-008) 135659615-135877821 retained_intron
ENSMUST00000147122 (Plcb4-013) 136007230-136008043 processed_transcript
ENSMUST00000147744 (Plcb4-003) 135987876-136014593 protein_coding
ENSMUST00000150072 (Plcb4-012) 135983029-135988196 processed_transcript
ENSMUST00000184371 (Plcb4-007) 135741830-136013269 nonsense_mediated_decay
ENSMUSG00000085709 (Gm14211)
predicted gene 14211 		ENSMUST00000152250 (Gm14211-001) 135686174-135693154 lincRNA
ENSMUSG00000085908 (Gm14209)
predicted gene 14209 		ENSMUST00000154946 (Gm14209-001) 135669453-135670425 sense_intronic
ENSMUSG00000086928 (Gm14210)
predicted gene 14210 		ENSMUST00000140949 (Gm14210-001) 135811945-135812927 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00043I_0001ENSG00000101333ENST00000278655ENST00000378473ENST00000378493ENST00000378501ENST00000407043ENST00000414679ENST00000416836ENST00000437503ENST00000441846ENST00000464199ENST00000473151ENST00000482123ENST00000492632ENSG00000125869ENST00000246070ENST00000427562ENSG00000225988ENST00000443469CIL_00043I_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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00043I_0001ENSG00000101333ENST00000278655ENST00000378473ENST00000378493ENST00000378501ENST00000414679ENST00000464199ENST00000473151ENST00000492632ENSG00000125869ENST00000246070ENST00000427562ENSG00000225988ENST00000443469CIL_00043I_0002ENSMUSG00000027270ENSMUST00000057503ENSMUST00000123436ENSMUST00000143777ENSMUST00000144403ENSMUST00000154674ENSMUSG00000039943ENSMUST00000035646ENSMUST00000110109ENSMUST00000127729ENSMUST00000134310ENSMUST00000137969ENSMUST00000139480ENSMUST00000144931ENSMUST00000147744ENSMUST00000150072ENSMUST00000184371ENSMUSG00000085709ENSMUST00000152250ENSMUSG00000085908ENSMUST00000154946ENSMUSG00000086928ENSMUST00000140949
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000101333 ENST00000278655 N/A N/A N/A 1.586±0.00 0.732±0.00 N/A N/A 0.655±0.00 N/A N/A 0.226±0.05 0.304±0.00 0.851±0.30 2.871±0.00
ENST00000378473 1.069±0.00 N/A N/A N/A 0.486±0.00 N/A 0.411±0.00 N/A 0.448±0.40 1.266±0.91 N/A 0.598±0.16 N/A N/A
ENST00000378493 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.952±0.00 N/A N/A
ENST00000378501 0.261±0.00 N/A N/A N/A 1.019±0.00 1.300±0.00 0.698±0.00 N/A 1.285±0.00 0.438±0.00 N/A 0.885±0.18 N/A 1.110±0.00
ENST00000407043 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000414679 0.673±0.00 1.017±0.00 0.357±0.00 0.606±0.02 3.793±0.00 3.263±0.00 0.502±0.00 0.024±0.00 1.106±0.00 N/A 0.222±0.00 N/A N/A 0.317±0.00
ENST00000416836 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000437503 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000441846 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464199 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.185±0.00 N/A N/A N/A
ENST00000473151 N/A N/A N/A N/A 1.234±0.00 N/A N/A N/A N/A N/A N/A N/A 0.181±0.00 N/A
ENST00000482123 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492632 N/A N/A 0.086±0.00 N/A 1.963±0.00 N/A N/A N/A N/A N/A 0.066±0.00 N/A 0.259±0.00 N/A
ENSG00000125869 ENST00000246070 N/A 0.520±0.00 0.143±0.00 20.769±4.07 0.521±0.24 0.826±0.00 0.048±0.00 N/A 0.527±0.00 0.616±0.00 N/A 9.647±10.83 0.547±0.51 0.875±0.64
ENST00000427562 0.070±0.00 N/A 0.125±0.00 N/A N/A 0.166±0.00 N/A N/A N/A 0.339±0.00 N/A N/A 0.055±0.00 N/A
ENSG00000225988 ENST00000443469 N/A N/A N/A N/A N/A N/A N/A N/A 0.238±0.00 N/A N/A N/A N/A 0.055±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027270 ENSMUST00000057503 0.065±0.00 N/A N/A 11.866±7.36 N/A N/A N/A N/A N/A N/A N/A 0.015±0.00 N/A N/A
ENSMUST00000123436 0.040±0.01 N/A 0.006±0.00 15.820±9.88 0.109±0.04 0.039±0.00 0.030±0.01 N/A 0.015±0.01 0.025±0.00 N/A 0.079±0.00 0.056±0.02 0.394±0.12
ENSMUST00000143777 N/A N/A N/A 2.426±1.14 N/A N/A N/A N/A 0.007±0.00 N/A N/A N/A N/A 0.025±0.00
ENSMUST00000144403 0.218±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.232±0.00 N/A N/A
ENSMUST00000154674 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.229±0.00 N/A N/A N/A
ENSMUSG00000039943 ENSMUST00000035646 N/A N/A N/A 8.633±0.00 N/A N/A N/A N/A 0.142±0.00 N/A N/A 1.355±0.33 1.319±0.08 2.557±0.00
ENSMUST00000110109 N/A 1.593±0.00 26.202±0.00 5.832±2.49 1.221±0.19 2.828±0.00 3.072±1.71 0.906±0.00 0.333±0.16 4.716±0.00 1.293±0.87 1.082±0.31 0.895±0.11 N/A
ENSMUST00000127044 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000127729 N/A N/A N/A N/A N/A N/A N/A N/A 0.958±0.00 N/A N/A 6.781±0.00 N/A N/A
ENSMUST00000132686 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134310 N/A 1.412±0.16 N/A N/A 1.756±0.00 N/A N/A N/A 0.153±0.08 N/A N/A 1.833±0.66 N/A N/A
ENSMUST00000137969 N/A 7.071±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139480 N/A N/A N/A N/A N/A 4.123±0.00 N/A N/A 0.156±0.04 N/A N/A 2.974±1.28 N/A N/A
ENSMUST00000141025 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144931 N/A N/A N/A N/A N/A N/A N/A N/A 0.078±0.00 N/A N/A N/A N/A N/A
ENSMUST00000146018 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147122 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147744 8.001±4.73 1.477±0.00 42.797±11.48 5.732±2.66 4.102±1.17 N/A 6.916±1.97 1.183±0.37 0.662±0.50 5.701±1.60 1.813±0.61 3.448±1.76 3.141±0.60 2.161±0.00
ENSMUST00000150072 N/A N/A N/A N/A N/A N/A N/A N/A 0.512±0.00 N/A N/A N/A N/A N/A
ENSMUST00000184371 N/A 1.787±0.00 17.326±0.00 N/A N/A N/A N/A 0.779±0.00 N/A N/A N/A 2.403±0.93 2.012±0.93 1.591±0.00
ENSMUSG00000085709 ENSMUST00000152250 0.153±0.00 0.430±0.16 0.324±0.00 N/A 0.357±0.03 N/A 0.124±0.00 0.319±0.06 0.124±0.08 0.524±0.32 N/A N/A N/A N/A
ENSMUSG00000085908 ENSMUST00000154946 N/A N/A 0.136±0.00 N/A N/A N/A N/A N/A 0.021±0.00 N/A N/A 0.119±0.00 N/A 0.614±0.06
ENSMUSG00000086928 ENSMUST00000140949 0.099±0.01 N/A 0.311±0.02 0.188±0.00 0.214±0.03 N/A 0.110±0.04 N/A 0.026±0.01 0.104±0.00 N/A 0.571±0.00 0.345±0.19 0.078±0.00

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