C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00043V_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000038768-ENSDARG00000097890 CGP 7955 3:47698957-47733091
GeneTranscriptPositionBiotype
ENSDARG00000038768 (mrpl12)
mitochondrial ribosomal protein L12 		ENSDART00000056618 (mrpl12-001) 47698986-47711112 protein_coding
ENSDART00000154561 (mrpl12-002) 47698957-47711298 protein_coding
ENSDARG00000097890 (si:ch1073-100f3.2)
si:ch1073-100f3.2 		ENSDART00000109544 (si:ch1073-100f3.2-001) 47719481-47733091 protein_coding
CIL_00043V_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000262814-ENSG00000262660 CGP 9606 17:81703357-81720539
GeneTranscriptPositionBiotype
ENSG00000183048 (SLC25A10)
solute carrier family 25 (mitochondrial carrier; dicarboxylate transporter), member 10 		ENST00000331531 (SLC25A10-001) 81712307-81721012 protein_coding
ENST00000350690 (SLC25A10-002) 81712341-81721012 protein_coding
ENST00000545862 (SLC25A10-201) 81712236-81721016 protein_coding
ENST00000570310 (SLC25A10-005) 81715921-81720007 retained_intron
ENST00000571876 (SLC25A10-003) 81715018-81715814 retained_intron
ENST00000573246 (SLC25A10-007) 81715972-81720451 retained_intron
ENST00000574129 (SLC25A10-004) 81712264-81720328 nonsense_mediated_decay
ENST00000574884 (SLC25A10-006) 81714961-81717852 nonsense_mediated_decay
ENSG00000262660 (SLC25A10)
39S ribosomal protein L12, mitochondrial {ECO:0000313|Ensembl:ENSP00000439565}; Mitochondrial dicarboxylate carrier {ECO:0000313 		ENST00000571730 (SLC25A10-001) 81703371-81720539 protein_coding
ENSG00000262814 (MRPL12)
mitochondrial ribosomal protein L12 		ENST00000333676 (MRPL12-001) 81703357-81707526 protein_coding
ENST00000541223 (MRPL12-201) 81703370-81707525 protein_coding
CIL_00043V_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000039640-ENSMUSG00000025792 CGP 10090 11:120484613-120499187
GeneTranscriptPositionBiotype
ENSMUSG00000025792 (Slc25a10)
solute carrier family 25 (mitochondrial carrier, dicarboxylate transporter), member 10 		ENSMUST00000026899 (Slc25a10-001) 120491840-120499187 protein_coding
ENSMUST00000123373 (Slc25a10-002) 120491915-120496916 processed_transcript
ENSMUST00000127349 (Slc25a10-003) 120491909-120495913 processed_transcript
ENSMUST00000138874 (Slc25a10-005) 120496099-120497963 processed_transcript
ENSMUST00000144706 (Slc25a10-004) 120491888-120498593 processed_transcript
ENSMUST00000152187 (Slc25a10-006) 120497725-120498277 processed_transcript
ENSMUSG00000039640 (Mrpl12)
mitochondrial ribosomal protein L12 		ENSMUST00000043627 (Mrpl12-001) 120484613-120489065 protein_coding
ENSMUST00000137619 (Mrpl12-002) 120485027-120488457 processed_transcript
ENSMUSG00000097658 (Gm16755)
predicted gene, 16755 		ENSMUST00000180595 (Gm16755-201) 120486339-120488582 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00043V_0001ENSDARG00000038768ENSDART00000056618ENSDART00000154561ENSDARG00000097890ENSDART00000109544CIL_00043V_0002ENSG00000183048ENST00000331531ENST00000350690ENST00000545862ENST00000570310ENST00000571876ENST00000573246ENST00000574129ENST00000574884ENSG00000262660ENST00000571730ENSG00000262814ENST00000333676ENST00000541223CIL_00043V_0003ENSMUSG00000025792ENSMUST00000026899ENSMUST00000123373ENSMUST00000127349ENSMUST00000138874ENSMUST00000144706ENSMUST00000152187ENSMUSG00000039640ENSMUST00000043627ENSMUST00000137619ENSMUSG00000097658ENSMUST00000180595
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00043V_0001ENSDARG00000038768ENSDART00000056618ENSDART00000154561ENSDARG00000097890ENSDART00000109544CIL_00043V_0002ENSG00000183048ENST00000331531ENST00000350690ENST00000545862ENST00000573246ENST00000574129ENSG00000262660ENST00000571730ENSG00000262814ENST00000333676ENST00000541223CIL_00043V_0003ENSMUSG00000025792ENSMUST00000026899ENSMUST00000123373ENSMUST00000144706ENSMUSG00000039640ENSMUST00000043627ENSMUST00000137619ENSMUSG00000097658ENSMUST00000180595
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000038768 ENSDART00000056618 N/A N/A N/A 12.410±6.81 N/A N/A 31.368±9.45 18.597±0.00 8.231±0.00 N/A 27.299±0.00 N/A N/A N/A
ENSDART00000154561 N/A N/A N/A 9.151±1.32 N/A N/A 1.722±0.00 2.659±0.22 N/A N/A N/A N/A N/A N/A
ENSDARG00000097890 ENSDART00000109544 N/A N/A N/A 0.102±0.04 N/A N/A 1.084±0.57 0.056±0.00 N/A N/A 0.487±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000183048 ENST00000331531 N/A N/A N/A N/A 8.087±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000350690 7.316±0.00 N/A 0.841±0.00 2.216±1.03 9.886±9.48 3.741±0.00 0.113±0.00 11.529±1.80 28.366±0.00 0.084±0.00 N/A 5.838±0.26 5.272±1.27 23.100±2.41
ENST00000545862 N/A N/A N/A N/A 9.268±0.00 N/A N/A N/A 16.302±0.00 N/A N/A 0.740±0.00 N/A N/A
ENST00000570310 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000571876 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000573246 N/A N/A N/A N/A N/A N/A 0.214±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000574129 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.945±0.00
ENST00000574884 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000262660 ENST00000571730 N/A N/A 0.430±0.00 N/A 0.426±0.00 N/A N/A N/A 1.009±0.00 N/A N/A 15.930±0.00 N/A 12.614±0.00
ENSG00000262814 ENST00000333676 N/A N/A N/A N/A N/A N/A N/A 6.335±0.00 N/A 0.025±0.00 N/A N/A N/A N/A
ENST00000541223 22.890±0.00 59.240±0.00 0.772±0.00 14.365±12.03 23.032±22.17 21.179±18.25 40.170±39.82 74.310±0.00 85.587±0.00 17.861±17.77 29.064±25.12 38.463±23.57 61.548±25.92 25.242±9.44
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025792 ENSMUST00000026899 275.054±81.51 166.136±30.90 40.785±4.32 10.103±7.49 296.316±127.37 134.370±23.37 11.019±3.90 300.833±38.95 65.267±44.33 62.956±7.71 1.764±0.62 60.927±26.32 42.336±33.14 21.701±10.72
ENSMUST00000123373 N/A N/A N/A 4.871±0.00 N/A N/A N/A N/A N/A N/A N/A 11.625±0.00 26.881±17.91 7.190±0.00
ENSMUST00000127349 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138874 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144706 N/A N/A 8.607±1.77 2.038±1.22 N/A N/A N/A N/A N/A N/A 0.779±0.03 1.572±0.00 3.678±0.00 N/A
ENSMUST00000152187 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000039640 ENSMUST00000043627 40.100±6.97 106.695±100.20 32.580±2.04 27.595±4.41 54.626±36.99 114.051±79.12 47.921±18.55 126.330±17.31 79.921±32.18 26.188±3.44 38.905±11.49 44.297±17.86 52.090±21.85 18.978±3.97
ENSMUST00000137619 25.433±11.66 421.479±34.00 N/A 15.583±0.00 55.709±21.97 N/A 24.885±6.48 59.744±0.00 29.435±10.69 N/A 14.358±0.79 13.109±3.37 30.909±15.15 11.308±0.61
ENSMUSG00000097658 ENSMUST00000180595 N/A N/A N/A 5.370±0.00 N/A N/A N/A N/A N/A N/A N/A 6.166±0.00 4.009±0.00 5.311±0.00

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