C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00044I_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000061742-ENSDARG00000077897 CGP 7955 18:34941392-34988134
GeneTranscriptPositionBiotype
ENSDARG00000061742 (clasrp)
CLK4-associating serine/arginine rich protein 		ENSDART00000088421 (clasrp-201) 34941395-34970496 protein_coding
ENSDART00000088425 (clasrp-202) 34947149-34970385 protein_coding
ENSDART00000127825 (clasrp-001) 34941392-34971130 protein_coding
ENSDART00000134854 (clasrp-003) 34969656-34971130 processed_transcript
ENSDART00000148032 (clasrp-002) 34965326-34971130 protein_coding
ENSDARG00000077897 (znf296)
zinc finger protein 296 		ENSDART00000098980 (znf296-001) 34971759-34988134 protein_coding
ENSDART00000125657 (znf296-002) 34973089-34978002 processed_transcript
CIL_00044I_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000104859-ENSG00000170684 CGP 9606 19:45039040-45076588
GeneTranscriptPositionBiotype
ENSG00000104859 (CLASRP)
CLK4-associating serine/arginine rich protein 		ENST00000221455 (CLASRP-001) 45039040-45070956 protein_coding
ENST00000391952 (CLASRP-003) 45039065-45070956 nonsense_mediated_decay
ENST00000391953 (CLASRP-002) 45039046-45070855 protein_coding
ENST00000544944 (CLASRP-004) 45039521-45070954 protein_coding
ENST00000585432 (CLASRP-014) 45067471-45068180 retained_intron
ENST00000585615 (CLASRP-015) 45068202-45070942 retained_intron
ENST00000587112 (CLASRP-006) 45040270-45064046 nonsense_mediated_decay
ENST00000587472 (CLASRP-019) 45069083-45070873 retained_intron
ENST00000588016 (CLASRP-013) 45052800-45058253 retained_intron
ENST00000588070 (CLASRP-018) 45069839-45070956 retained_intron
ENST00000588247 (CLASRP-011) 45039074-45040747 retained_intron
ENST00000588936 (CLASRP-012) 45039074-45052853 protein_coding
ENST00000591410 (CLASRP-010) 45039050-45060442 nonsense_mediated_decay
ENST00000591904 (CLASRP-016) 45068420-45070955 protein_coding
ENST00000592056 (CLASRP-009) 45039050-45053087 retained_intron
ENST00000592876 (CLASRP-017) 45069646-45070828 retained_intron
ENSG00000207003 (RNU6-611P)
RNA, U6 small nuclear 611, pseudogene 		ENST00000384276 (RNU6-611P-201) 45047458-45047561 snRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00044I_0001ENSDARG00000061742ENSDART00000088421ENSDART00000088425ENSDART00000127825ENSDART00000134854ENSDART00000148032ENSDARG00000077897ENSDART00000098980ENSDART00000125657CIL_00044I_0002ENSG00000104859ENST00000221455ENST00000391952ENST00000391953ENST00000544944ENST00000585432ENST00000585615ENST00000587112ENST00000587472ENST00000588016ENST00000588070ENST00000588247ENST00000588936ENST00000591410ENST00000591904ENST00000592056ENST00000592876ENSG00000207003ENST00000384276
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00044I_0001ENSDARG00000061742ENSDART00000088421ENSDART00000088425ENSDART00000127825ENSDART00000148032ENSDARG00000077897ENSDART00000098980ENSDART00000125657CIL_00044I_0002ENSG00000104859ENST00000221455ENST00000391952ENST00000391953ENST00000544944ENST00000587112ENST00000588016ENST00000588070ENST00000588247ENST00000591410ENST00000592056ENSG00000207003ENST00000384276
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000061742 ENSDART00000088421 N/A N/A N/A 3.753±0.00 N/A N/A 3.521±0.00 N/A N/A N/A 2.508±0.00 N/A N/A N/A
ENSDART00000088425 N/A N/A N/A N/A N/A N/A N/A N/A 0.324±0.00 N/A N/A N/A N/A N/A
ENSDART00000127825 N/A N/A N/A 9.566±1.36 N/A N/A 2.954±0.18 5.745±0.33 0.113±0.00 N/A N/A N/A N/A N/A
ENSDART00000134854 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000148032 N/A N/A N/A 26.608±14.29 N/A N/A 9.632±3.23 14.390±8.34 N/A N/A N/A N/A N/A N/A
ENSDARG00000077897 ENSDART00000098980 N/A N/A N/A 0.783±0.29 N/A N/A 0.729±0.50 3.418±1.62 0.054±0.00 N/A 0.281±0.00 N/A N/A N/A
ENSDART00000125657 N/A N/A N/A N/A N/A N/A N/A N/A 0.115±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000104859 ENST00000221455 3.412±0.00 15.430±0.00 N/A 7.162±0.00 2.212±1.21 11.807±0.00 1.011±0.90 4.852±0.00 4.384±0.00 N/A 2.058±0.00 11.420±4.18 5.701±1.34 5.892±0.00
ENST00000391952 6.474±0.00 10.056±0.00 N/A 5.902±0.00 2.826±0.00 0.551±0.00 1.243±1.10 N/A 0.399±0.00 11.414±0.00 10.632±0.00 9.231±2.76 3.179±0.13 13.078±7.32
ENST00000391953 N/A N/A N/A 0.588±0.00 3.245±0.00 N/A N/A 1.787±0.00 1.230±0.38 6.189±5.35 N/A 3.766±3.24 2.690±0.55 15.653±0.00
ENST00000544944 N/A N/A 0.336±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000585432 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000585615 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587112 N/A 14.932±0.00 N/A 12.690±0.00 3.996±2.71 1.401±0.00 3.675±0.00 4.660±0.00 1.667±0.42 5.040±3.97 0.715±0.00 0.463±0.00 N/A 12.785±3.81
ENST00000587472 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588016 N/A N/A 1.825±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588070 N/A N/A 1.367±0.00 N/A N/A 1.989±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588247 N/A N/A N/A N/A 2.117±0.00 N/A N/A N/A N/A 1.423±0.00 N/A N/A N/A N/A
ENST00000588936 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591410 N/A N/A N/A N/A N/A 1.078±0.00 N/A 0.653±0.00 0.988±0.00 1.105±0.00 N/A N/A N/A N/A
ENST00000591904 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592056 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.651±0.00 N/A
ENST00000592876 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000207003 ENST00000384276 N/A 2.258±0.00 N/A 1.334±0.00 N/A 0.711±0.00 0.242±0.00 0.256±0.00 N/A N/A N/A N/A 0.658±0.00 0.524±0.07

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