C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00044Y_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000002506-ENSDARG00000012199 CGP 7955 7:44602709-44629653
GeneTranscriptPositionBiotype
ENSDARG00000002506 (C7H16orf87)
chromosome 16 open reading frame 87 		ENSDART00000018972 (C7H16orf87-201) 44602709-44610814 protein_coding
ENSDARG00000012199 (gpt2)
glutamic pyruvate transaminase (alanine aminotransferase) 2 		ENSDART00000115090 (gpt2-001) 44617056-44629653 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_00044Y_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000155330-ENSG00000166123 CGP 9606 16:46796607-46931297
GeneTranscriptPositionBiotype
ENSG00000155330 (C16orf87)
chromosome 16 open reading frame 87 		ENST00000285697 (C16orf87-001) 46802094-46831411 protein_coding
ENST00000394806 (C16orf87-002) 46796607-46831162 protein_coding
ENST00000564250 (C16orf87-004) 46803003-46830759 processed_transcript
ENST00000565112 (C16orf87-003) 46802718-46831068 protein_coding
ENSG00000166123 (GPT2)
glutamic pyruvate transaminase (alanine aminotransferase) 2 		ENST00000340124 (GPT2-001) 46884378-46931297 protein_coding
ENST00000440783 (GPT2-002) 46884835-46931288 protein_coding
ENST00000562132 (GPT2-004) 46884695-46909874 protein_coding
ENST00000562801 (GPT2-006) 46915298-46929007 retained_intron
ENST00000569193 (GPT2-003) 46923833-46931286 retained_intron
ENSG00000260889 (CKBP1)
creatine kinase B pseudogene 1 		ENST00000565489 (CKBP1-001) 46842632-46844618 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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CIL_00044Y_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000036934-ENSMUSG00000031700 CGP 10090 8:85408759-85527560
GeneTranscriptPositionBiotype
ENSMUSG00000031700 (Gpt2)
glutamic pyruvate transaminase (alanine aminotransferase) 2 		ENSMUST00000034136 (Gpt2-001) 85492576-85527560 protein_coding
ENSMUST00000132932 (Gpt2-002) 85492607-85524834 nonsense_mediated_decay
ENSMUST00000140189 (Gpt2-004) 85515977-85521494 retained_intron
ENSMUST00000143659 (Gpt2-003) 85492609-85493307 processed_transcript
ENSMUST00000143846 (Gpt2-005) 85519409-85525680 processed_transcript
ENSMUSG00000036934 (4921524J17Rik)
RIKEN cDNA 4921524J17 gene 		ENSMUST00000047749 (4921524J17Rik-201) 85408759-85432841 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00044Y_0001ENSDARG00000002506ENSDART00000018972ENSDARG00000012199ENSDART00000115090CIL_00044Y_0002ENSG00000155330ENST00000285697ENST00000394806ENST00000564250ENST00000565112ENSG00000166123ENST00000340124ENST00000440783ENST00000562132ENST00000562801ENST00000569193ENSG00000260889ENST00000565489CIL_00044Y_0003ENSMUSG00000031700ENSMUST00000034136ENSMUST00000132932ENSMUST00000140189ENSMUST00000143659ENSMUST00000143846ENSMUSG00000036934ENSMUST00000047749
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00044Y_0001ENSDARG00000002506ENSDART00000018972ENSDARG00000012199ENSDART00000115090CIL_00044Y_0002ENSG00000155330ENST00000285697ENST00000394806ENSG00000166123ENST00000340124ENST00000440783ENST00000562132ENST00000569193ENSG00000260889ENST00000565489CIL_00044Y_0003ENSMUSG00000031700ENSMUST00000034136ENSMUST00000143659ENSMUSG00000036934ENSMUST00000047749
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000002506 ENSDART00000018972 N/A N/A N/A 31.583±2.33 N/A N/A 37.585±15.28 33.580±8.45 0.285±0.00 N/A 13.901±0.00 N/A N/A N/A
ENSDARG00000012199 ENSDART00000115090 N/A N/A N/A 3.768±2.97 N/A N/A 2.220±0.55 3.826±1.36 0.300±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000155330 ENST00000285697 0.943±0.00 1.818±0.00 0.860±0.00 2.154±0.00 1.673±0.73 1.279±0.73 1.398±0.77 3.263±1.39 1.957±0.89 1.705±0.18 0.615±0.00 1.302±0.49 2.538±0.42 11.541±2.14
ENST00000394806 0.156±0.00 N/A N/A N/A N/A 0.352±0.00 0.232±0.05 0.519±0.17 0.419±0.13 0.348±0.03 N/A 0.261±0.02 0.332±0.02 0.938±0.00
ENST00000564250 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565112 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000166123 ENST00000340124 15.292±0.00 0.323±0.00 1.863±0.00 12.334±8.64 11.214±9.11 2.546±1.59 1.908±1.57 15.471±5.87 13.245±11.85 0.598±0.00 16.195±0.42 5.905±3.25 2.078±0.15 13.118±0.03
ENST00000440783 N/A 0.147±0.00 0.404±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000562132 N/A N/A N/A N/A N/A N/A 0.820±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000562801 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569193 N/A N/A N/A N/A N/A 0.625±0.40 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000260889 ENST00000565489 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.077±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031700 ENSMUST00000034136 64.481±30.59 48.046±10.51 13.586±1.37 9.412±2.78 29.932±4.18 10.984±0.88 10.081±0.81 28.959±2.08 48.592±38.65 5.475±0.64 76.624±6.72 22.285±4.74 8.310±8.50 7.068±2.27
ENSMUST00000132932 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140189 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143659 N/A 103.797±28.77 N/A N/A 36.414±2.02 10.126±2.68 N/A N/A N/A 6.021±0.00 N/A 29.444±7.23 N/A N/A
ENSMUST00000143846 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000036934 ENSMUST00000047749 4.448±0.98 10.855±1.13 3.444±0.73 2.067±1.23 3.687±0.72 4.288±0.68 5.348±0.80 4.549±0.32 5.353±1.62 6.014±0.94 4.742±0.55 10.210±4.07 7.516±4.40 6.582±2.94

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