C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000451_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000012199-ENSDARG00000023921 CGP 7955 7:44617056-44646235
GeneTranscriptPositionBiotype
ENSDARG00000012199 (gpt2)
glutamic pyruvate transaminase (alanine aminotransferase) 2 		ENSDART00000115090 (gpt2-001) 44617056-44629653 protein_coding
ENSDARG00000023921 (dnaja2)
DnaJ (Hsp40) homolog, subfamily A, member 2 		ENSDART00000029586 (dnaja2-201) 44633988-44646235 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_000451_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000166123-ENSG00000069345 CGP 9606 16:46884378-46973788
GeneTranscriptPositionBiotype
ENSG00000069345 (DNAJA2)
DnaJ (Hsp40) homolog, subfamily A, member 2 		ENST00000317089 (DNAJA2-001) 46955362-46973788 protein_coding
ENST00000563158 (DNAJA2-002) 46956622-46973664 nonsense_mediated_decay
ENST00000569553 (DNAJA2-005) 46958563-46959611 retained_intron
ENST00000617000 (DNAJA2-003) 46964733-46972943 protein_coding
ENSG00000166123 (GPT2)
glutamic pyruvate transaminase (alanine aminotransferase) 2 		ENST00000340124 (GPT2-001) 46884378-46931297 protein_coding
ENST00000440783 (GPT2-002) 46884835-46931288 protein_coding
ENST00000562132 (GPT2-004) 46884695-46909874 protein_coding
ENST00000562801 (GPT2-006) 46915298-46929007 retained_intron
ENST00000569193 (GPT2-003) 46923833-46931286 retained_intron

Homo sapiens Ensembl (GRCh38)

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CIL_000451_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000031700-ENSMUSG00000031701 CGP 10090 8:85492576-85555271
GeneTranscriptPositionBiotype
ENSMUSG00000031700 (Gpt2)
glutamic pyruvate transaminase (alanine aminotransferase) 2 		ENSMUST00000034136 (Gpt2-001) 85492576-85527560 protein_coding
ENSMUST00000132932 (Gpt2-002) 85492607-85524834 nonsense_mediated_decay
ENSMUST00000140189 (Gpt2-004) 85515977-85521494 retained_intron
ENSMUST00000143659 (Gpt2-003) 85492609-85493307 processed_transcript
ENSMUST00000143846 (Gpt2-005) 85519409-85525680 processed_transcript
ENSMUSG00000031701 (Dnaja2)
DnaJ (Hsp40) homolog, subfamily A, member 2 		ENSMUST00000034138 (Dnaja2-201) 85537640-85555271 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000451_0001ENSDARG00000012199ENSDART00000115090ENSDARG00000023921ENSDART00000029586CIL_000451_0002ENSG00000069345ENST00000317089ENST00000563158ENST00000569553ENST00000617000ENSG00000166123ENST00000340124ENST00000440783ENST00000562132ENST00000562801ENST00000569193CIL_000451_0003ENSMUSG00000031700ENSMUST00000034136ENSMUST00000132932ENSMUST00000140189ENSMUST00000143659ENSMUST00000143846ENSMUSG00000031701ENSMUST00000034138
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000451_0001ENSDARG00000012199ENSDART00000115090ENSDARG00000023921ENSDART00000029586CIL_000451_0002ENSG00000069345ENST00000317089ENST00000563158ENSG00000166123ENST00000340124ENST00000440783ENST00000562132ENST00000569193CIL_000451_0003ENSMUSG00000031700ENSMUST00000034136ENSMUST00000143659ENSMUSG00000031701ENSMUST00000034138
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000012199 ENSDART00000115090 N/A N/A N/A 3.768±2.97 N/A N/A 2.220±0.55 3.826±1.36 0.300±0.00 N/A N/A N/A N/A N/A
ENSDARG00000023921 ENSDART00000029586 N/A N/A N/A 52.634±0.00 N/A N/A 30.326±38.91 53.113±51.58 6.039±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000069345 ENST00000317089 7.549±0.00 6.923±0.00 2.674±0.00 9.574±0.52 5.863±2.98 5.707±1.87 6.301±2.22 8.149±1.44 5.835±0.84 7.278±1.26 6.670±3.56 7.660±1.51 8.209±0.47 15.452±3.60
ENST00000563158 17.914±0.00 18.242±0.00 5.044±0.00 25.051±5.69 13.748±4.03 12.882±5.68 14.679±4.79 10.277±6.57 10.226±2.09 10.539±3.74 15.712±6.92 15.775±5.18 15.580±12.34 44.557±11.94
ENST00000569553 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000617000 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000166123 ENST00000340124 15.292±0.00 0.323±0.00 1.863±0.00 12.334±8.64 11.214±9.11 2.546±1.59 1.908±1.57 15.471±5.87 13.245±11.85 0.598±0.00 16.195±0.42 5.905±3.25 2.078±0.15 13.118±0.03
ENST00000440783 N/A 0.147±0.00 0.404±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000562132 N/A N/A N/A N/A N/A N/A 0.820±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000562801 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569193 N/A N/A N/A N/A N/A 0.625±0.40 N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031700 ENSMUST00000034136 64.481±30.59 48.046±10.51 13.586±1.37 9.412±2.78 29.932±4.18 10.984±0.88 10.081±0.81 28.959±2.08 48.592±38.65 5.475±0.64 76.624±6.72 22.285±4.74 8.310±8.50 7.068±2.27
ENSMUST00000132932 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140189 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143659 N/A 103.797±28.77 N/A N/A 36.414±2.02 10.126±2.68 N/A N/A N/A 6.021±0.00 N/A 29.444±7.23 N/A N/A
ENSMUST00000143846 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000031701 ENSMUST00000034138 9.246±1.87 11.687±4.66 23.677±0.94 33.768±23.57 5.865±0.93 7.387±1.21 17.730±1.82 15.274±3.01 13.110±5.15 10.077±1.88 49.644±1.24 13.794±19.08 54.809±41.22 26.414±22.71

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